RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 RAB39BQ96DA2 213 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 CPPED1Q9BRF8 314 aaPredicted RBP13.52□□□□□ -0.25
PLOD3-216ENST00000489927 RBM4Q9BWF3 364 aaKnown RBP13.52□□□□□ -0.25
PLOD3-216ENST00000489927 BCL2L14Q9BZR8 327 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 C1orf198Q9H425 327 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 SLCO1B3Q9NPD5 702 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 ANGPT4Q9Y264 503 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 WIPI2Q9Y4P8 454 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 CACNG2Q9Y698 323 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 DYSFO75923 2080 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 ASAH2BP0C7U1 165 aa13.51□□□□□ -0.25
PLOD3-216ENST00000489927 TEKQ02763 1124 aa13.51□□□□□ -0.25
PLOD3-216ENST00000489927 GLO1Q04760 184 aa13.51□□□□□ -0.25
PLOD3-216ENST00000489927 TSTQ16762 297 aaKnown RBP13.51□□□□□ -0.25
PLOD3-216ENST00000489927 TTC33Q6PID6 262 aaPredicted RBP13.51□□□□□ -0.25
PLOD3-216ENST00000489927 DLEU7Q6UYE1 221 aa13.51□□□□□ -0.25
PLOD3-216ENST00000489927 USP51Q70EK9 711 aa13.51□□□□□ -0.25
PLOD3-216ENST00000489927 DPPA2Q7Z7J5 298 aa13.51□□□□□ -0.25
PLOD3-216ENST00000489927 TSPYL5Q86VY4 417 aaPredicted RBP13.51□□□□□ -0.25
PLOD3-216ENST00000489927 PTOV1Q86YD1 416 aa13.51□□□□□ -0.25
PLOD3-216ENST00000489927 OR4D11Q8NGI4 311 aa13.51□□□□□ -0.25
PLOD3-216ENST00000489927 OR1J2Q8NGS2 313 aa13.51□□□□□ -0.25
PLOD3-216ENST00000489927 SGMS2Q8NHU3 365 aa13.51□□□□□ -0.25
PLOD3-216ENST00000489927 VANGL1Q8TAA9 524 aaPredicted RBP13.51□□□□□ -0.25
PLOD3-216ENST00000489927 ADAMTS16Q8TE57 1224 aa13.51□□□□□ -0.25
PLOD3-216ENST00000489927 MCHR2Q969V1 340 aa13.51□□□□□ -0.25
PLOD3-216ENST00000489927 TLCD1Q96CP7 247 aa13.51□□□□□ -0.25
PLOD3-216ENST00000489927 JMJD8Q96S16 334 aa13.51□□□□□ -0.25
PLOD3-216ENST00000489927 ZNF347Q96SE7 839 aa13.51□□□□□ -0.25
PLOD3-216ENST00000489927 SLC6A7Q99884 636 aa13.51□□□□□ -0.25
PLOD3-216ENST00000489927 DECR2Q9NUI1 292 aa13.51□□□□□ -0.25
PLOD3-216ENST00000489927 ZNF229Q9UJW7 825 aa13.51□□□□□ -0.25
PLOD3-216ENST00000489927 TRIM33Q9UPN9 1127 aa13.51□□□□□ -0.25
PLOD3-216ENST00000489927 IQCMA0A1B0GVH7 501 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 CLDN25C9JDP6 229 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 M0QX08 132 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 TPD52L2O43399 206 aaKnown RBP13.5□□□□□ -0.25
PLOD3-216ENST00000489927 TGDSO95455 350 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 BCL10O95999 233 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 PTHP01270 115 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 IGHV2-5P01817 119 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 IGHG1P01857 330 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 DRD4P21917 467 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 CLRN1P58418 232 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 PLP2Q04941 152 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 HIST3H3Q16695 136 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 NRN1LQ496H8 165 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 AGKQ53H12 422 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 RUNDC3AQ59EK9 446 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 LRRC18Q8N456 261 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 C11orf65Q8NCR3 313 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 RBM15BQ8NDT2 890 aaKnown RBP13.5□□□□□ -0.25
PLOD3-216ENST00000489927 C7orf26Q96N11 449 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 ZNF426Q9BUY5 554 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 SUCNR1Q9BXA5 334 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 SAP30LQ9HAJ7 183 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 ESM1Q9NQ30 184 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 SLC7A7Q9UM01 511 aa13.5□□□□□ -0.25
PLOD3-216ENST00000489927 BLOC1S5-TXNDC5H3BN57 136 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 J3QLI3 93 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 ERLIN1O75477 346 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 IGHV3-13P01766 116 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 MT-ND5P03915 603 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 HIST1H2ABP04908 130 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 MMP7P09237 267 aaPredicted RBP13.49□□□□□ -0.25
PLOD3-216ENST00000489927 UMPSP11172 480 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 LIMS1P48059 325 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 ZNF84P51523 738 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 CYP51A1Q16850 503 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 HFEQ30201 348 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 DCAF12L2Q5VW00 463 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 HIST3H2AQ7L7L0 130 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 NANOGNBQ7Z5D8 188 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 SYT14Q8NB59 555 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 CPEB3Q8NE35 698 aaKnown RBP13.49□□□□□ -0.25
PLOD3-216ENST00000489927 OR1J1Q8NGS3 322 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 NANPQ8TBE9 248 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 HIST1H2ACQ93077 130 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 TIMD4Q96H15 378 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 CCDC28BQ9BUN5 200 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 MRPL13Q9BYD1 178 aaKnown RBP13.49□□□□□ -0.25
PLOD3-216ENST00000489927 SLC19A3Q9BZV2 496 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 LRMDAQ9H2I8 198 aa13.49□□□□□ -0.25
PLOD3-216ENST00000489927 MGAM2Q2M2H8 2515 aa13.48□□□□□ -0.25
PLOD3-216ENST00000489927 TRAPPC13A5PLN9 417 aa13.48□□□□□ -0.25
PLOD3-216ENST00000489927 MAKP20794 623 aa13.48□□□□□ -0.25
PLOD3-216ENST00000489927 CCNOP22674 350 aa13.48□□□□□ -0.25
PLOD3-216ENST00000489927 APLNRP35414 380 aa13.48□□□□□ -0.25
PLOD3-216ENST00000489927 ZNF81P51508 661 aa13.48□□□□□ -0.25
PLOD3-216ENST00000489927 MTPNP58546 118 aa13.48□□□□□ -0.25
PLOD3-216ENST00000489927 HSF2Q03933 536 aa13.48□□□□□ -0.25
PLOD3-216ENST00000489927 SELPLGQ14242 412 aa13.48□□□□□ -0.25
PLOD3-216ENST00000489927 MOGQ16653 247 aa13.48□□□□□ -0.25
PLOD3-216ENST00000489927 AWAT1Q58HT5 328 aa13.48□□□□□ -0.25
PLOD3-216ENST00000489927 PABPC1L2AQ5JQF8 200 aa13.48□□□□□ -0.25
PLOD3-216ENST00000489927 TMEM255AQ5JRV8 349 aa13.48□□□□□ -0.25
PLOD3-216ENST00000489927 ZNF771Q7L3S4 317 aaPredicted RBP13.48□□□□□ -0.25
PLOD3-216ENST00000489927 ZNF101Q8IZC7 436 aa13.48□□□□□ -0.25
PLOD3-216ENST00000489927 BPIFB2Q8N4F0 458 aa13.48□□□□□ -0.25
PLOD3-216ENST00000489927 ZDHHC22Q8N966 263 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms