RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 GBAP04062 536 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ARG1P05089 322 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 THBDP07204 575 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 KCNE1P15382 129 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SRMP19623 302 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 RAB6AP20340 208 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 CDK2P24941 298 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 CD34P28906 385 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 PPP2R1BP30154 601 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ACVR1BP36896 505 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ACVRL1P37023 503 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF84P51523 738 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ATP1B3P54709 279 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 STXBP1P61764 594 aaKnown RBP4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 CNTN1Q12860 1018 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SMAD4Q13485 552 aaKnown RBP4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 PDE7AQ13946 482 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 TGIF1Q15583 401 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 UBE2V2Q15819 145 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 HAGHQ16775 308 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ISXQ2M1V0 245 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 PGGHGQ32M88 737 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 MOGAT2Q3SYC2 334 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF385BQ569K4 471 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 AKR1C8PQ5T2L2 129 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 FKBP1CQ5VVH2 108 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 PRAMEF9Q5VWM5 478 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 LYPLAL1Q5VWZ2 237 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 OR2A2Q6IF42 318 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 GRHL2Q6ISB3 625 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 PWWP2BQ6NUJ5 590 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SLC22A25Q6T423 547 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF683Q8IZ20 524 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 GALNT16Q8N428 558 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 LINC01465Q8N7H1 131 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 TMEM99Q8N816 258 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 C17orf47Q8NEP4 570 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SLC24A4Q8NFF2 622 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 BBS1Q8NFJ9 593 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 OR4E2Q8NGC2 313 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 OR6J1Q8NGC5 347 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 OR4K17Q8NGC6 315 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 OR4K15Q8NH41 348 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 LYPD6BQ8NI32 183 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SYNPRQ8TBG9 265 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SPPL3Q8TCT6 385 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ADAMTS17Q8TE56 1095 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SMPDL3BQ92485 455 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 RSC1A1Q92681 617 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 MIB2Q96AX9 1013 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 FAM122AQ96E09 287 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 MVB12AQ96EY5 273 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 PRRC1Q96M27 445 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 STACQ99469 402 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SLC17A9Q9BYT1 436 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF350Q9GZX5 532 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SLITRK2Q9H156 845 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 OR51B6Q9H340 312 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 POFUT1Q9H488 388 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 PARD6AQ9NPB6 346 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 NCDNQ9UBB6 729 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 PRODH2Q9UF12 536 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 HDGFL3Q9Y3E1 203 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ATG4BQ9Y4P1 393 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ETV7Q9Y603 341 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 IGLV3-10A0A075B6K4 115 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 A0A087WUU8 490 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 LNP1A1A4G5 178 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 MYBPHLA2RUH7 354 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 CDHR4A6H8M9 788 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 TVP23AA6NH52 213 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 DRGXA6NNA5 263 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 ANKRD66B4E2M5 251 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 H0YIV9 168 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 FAM229AH3BQW9 127 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 J3QLW9 94 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 RTCAO00442 366 aaKnown RBP4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 TP53I11O14683 189 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 HSPA12AO43301 675 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 TGOLN2O43493 480 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 HIST1H2BKO60814 126 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 RAMP2O60895 175 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 CBR3O75828 277 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 DDNO94850 711 aaPredicted RBP4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 CH25HO95992 272 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 HIST1H2BJP06899 126 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 C8GP07360 202 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 CTSLP07711 333 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 SOD3P08294 240 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 FURINP09958 794 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 NPSP0C0P6 89 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 DAOP14920 347 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 FABP4P15090 132 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 PGAM2P15259 253 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF19P17023 458 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 HIST1H2BOP23527 126 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 ITPKBP27987 946 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 PSMB6P28072 239 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 TIA1P31483 386 aaKnown RBP eCLIP4.33□□□□□ -1.727e-14■■■■□ 21.6
SNRNP40-206ENST00000489853 HIST1H2BBP33778 126 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms