RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 ZNF519Q8TB69 540 aa16.66■□□□□ 0.26
APTX-229ENST00000489583 TSPEARQ8WU66 669 aa16.66■□□□□ 0.26
APTX-229ENST00000489583 ZNF75AQ96N20 296 aa16.66■□□□□ 0.26
APTX-229ENST00000489583 SH3GL3Q99963 347 aa16.66■□□□□ 0.26
APTX-229ENST00000489583 RBM4Q9BWF3 364 aaKnown RBP16.66■□□□□ 0.26
APTX-229ENST00000489583 SUCNR1Q9BXA5 334 aa16.66■□□□□ 0.26
APTX-229ENST00000489583 PLA2G12AQ9BZM1 189 aa16.66■□□□□ 0.26
APTX-229ENST00000489583 ZNF665Q9H7R5 613 aa16.66■□□□□ 0.26
APTX-229ENST00000489583 VAPAQ9P0L0 249 aa16.66■□□□□ 0.26
APTX-229ENST00000489583 MYEF2Q9P2K5 600 aaKnown RBP16.66■□□□□ 0.26
APTX-229ENST00000489583 ARL2BPQ9Y2Y0 163 aa16.66■□□□□ 0.26
APTX-229ENST00000489583 A0A1W2PRG6 482 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 CPSF4LA6NMK7 179 aaKnown RBP16.65■□□□□ 0.26
APTX-229ENST00000489583 CLDN25C9JDP6 229 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 ANGPT2O15123 496 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 DHHO43323 396 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 SPRY1O43609 319 aaPredicted RBP16.65■□□□□ 0.26
APTX-229ENST00000489583 RGS9O75916 674 aaPredicted RBP16.65■□□□□ 0.26
APTX-229ENST00000489583 GPX2P18283 190 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 EPHA1P21709 976 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 LIMS1P48059 325 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 MVKQ03426 396 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 USP43Q70EL4 1123 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 NANOGNBQ7Z5D8 188 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 CARM1Q86X55 608 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 FUNDC1Q8IVP5 155 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 SLC30A8Q8IWU4 369 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 RBM15BQ8NDT2 890 aaKnown RBP16.65■□□□□ 0.26
APTX-229ENST00000489583 OR4K5Q8NGD3 323 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 SGMS2Q8NHU3 365 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 RAB1CQ92928 201 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 TMEM54Q969K7 222 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 YIPF5Q969M3 257 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 RACGAP1Q9H0H5 632 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 TMEM38BQ9NVV0 291 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 ZNF224Q9NZL3 707 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 SLAMF8Q9P0V8 285 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 EIF3KQ9UBQ5 218 aaKnown RBP16.65■□□□□ 0.26
APTX-229ENST00000489583 ZNF229Q9UJW7 825 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 CAPN7Q9Y6W3 813 aa16.65■□□□□ 0.26
APTX-229ENST00000489583 IGHV1-69-2A0A0G2JMI3 117 aa16.64■□□□□ 0.25
APTX-229ENST00000489583 PLSCR5A0PG75 271 aa16.64■□□□□ 0.25
APTX-229ENST00000489583 BLOC1S5-TXNDC5H3BN57 136 aa16.64■□□□□ 0.25
APTX-229ENST00000489583 KPNA4O00629 521 aaPredicted RBP16.64■□□□□ 0.25
APTX-229ENST00000489583 MGRN1O60291 552 aa16.64■□□□□ 0.25
APTX-229ENST00000489583 MPZL1O95297 269 aa16.64■□□□□ 0.25
APTX-229ENST00000489583 QDPRP09417 244 aa16.64■□□□□ 0.25
APTX-229ENST00000489583 GCH1P30793 250 aa16.64■□□□□ 0.25
APTX-229ENST00000489583 MAGEB1P43366 347 aa16.64■□□□□ 0.25
APTX-229ENST00000489583 UCP2P55851 309 aa16.64■□□□□ 0.25
APTX-229ENST00000489583 ZP4Q12836 540 aa16.64■□□□□ 0.25
APTX-229ENST00000489583 KLF10Q13118 480 aa16.64■□□□□ 0.25
APTX-229ENST00000489583 MSMPQ1L6U9 139 aa16.64■□□□□ 0.25
APTX-229ENST00000489583 ENTPD8Q5MY95 495 aa16.64■□□□□ 0.25
APTX-229ENST00000489583 PEG10Q86TG7 708 aaKnown RBP16.64■□□□□ 0.25
APTX-229ENST00000489583 COMTD1Q86VU5 262 aa16.64■□□□□ 0.25
APTX-229ENST00000489583 BPIFB2Q8N4F0 458 aa16.64■□□□□ 0.25
APTX-229ENST00000489583 FAM216AQ8WUB2 273 aa16.64■□□□□ 0.25
APTX-229ENST00000489583 MPP4Q96JB8 637 aa16.64■□□□□ 0.25
APTX-229ENST00000489583 SAP30LQ9HAJ7 183 aa16.64■□□□□ 0.25
APTX-229ENST00000489583 CCNB1IP1Q9NPC3 277 aa16.64■□□□□ 0.25
APTX-229ENST00000489583 NKIRAS2Q9NYR9 191 aa16.64■□□□□ 0.25
APTX-229ENST00000489583 STX18Q9P2W9 335 aaKnown RBP16.64■□□□□ 0.25
APTX-229ENST00000489583 LEF1Q9UJU2 399 aaPredicted RBP16.64■□□□□ 0.25
APTX-229ENST00000489583 NDUFAF1Q9Y375 327 aa16.64■□□□□ 0.25
APTX-229ENST00000489583 TRAPPC13A5PLN9 417 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 M0R3H8 397 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 DCTN3O75935 186 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 NCR1O76036 304 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 MFN2O95140 757 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 NR2C1P13056 603 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 ZNF250P15622 560 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 HOXB9P17482 250 aaPredicted RBP16.63■□□□□ 0.25
APTX-229ENST00000489583 CD247P20963 164 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 CCNOP22674 350 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 GUCA1AP43080 201 aaPredicted RBP16.63■□□□□ 0.25
APTX-229ENST00000489583 SLC3A1Q07837 685 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 MELKQ14680 651 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 ZNF74Q16587 644 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 NRN1LQ496H8 165 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 PAGE3Q5JUK9 113 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 FAM209AQ5JX71 171 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 AVPI1Q5T686 147 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 INTS11Q5TA45 600 aaKnown RBP16.63■□□□□ 0.25
APTX-229ENST00000489583 DCAF12L2Q5VW00 463 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 PATL1Q86TB9 770 aaKnown RBP16.63■□□□□ 0.25
APTX-229ENST00000489583 MSRB3Q8IXL7 192 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 SEMA6DQ8NFY4 1073 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 VANGL1Q8TAA9 524 aaPredicted RBP16.63■□□□□ 0.25
APTX-229ENST00000489583 NANPQ8TBE9 248 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 ADAMTS16Q8TE57 1224 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 RASSF5Q8WWW0 418 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 SLC19A3Q9BZV2 496 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 EGLN1Q9GZT9 426 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 SLC7A7Q9UM01 511 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 GMEB1Q9Y692 573 aa16.63■□□□□ 0.25
APTX-229ENST00000489583 J3QLI3 93 aa16.62■□□□□ 0.25
APTX-229ENST00000489583 SNAP29O95721 258 aa16.62■□□□□ 0.25
APTX-229ENST00000489583 CLPTM1O96005 669 aa16.62■□□□□ 0.25
APTX-229ENST00000489583 CCL2P13500 99 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms