RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 GTF2A1P52655 376 aaPredicted RBP19.23■□□□□ 0.67
SMC4-221ENST00000489573 ZNF85Q03923 595 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 HIST3H3Q16695 136 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 TMPRSS11AQ6ZMR5 421 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 YIPF6Q96EC8 236 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 ZNF432O94892 652 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 CRYABP02511 175 aaKnown RBP19.23■□□□□ 0.67
SMC4-221ENST00000489573 LIPAP38571 399 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 CSNK1A1P48729 337 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 HCCSP53701 268 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 ZNF322Q6U7Q0 402 aaPredicted RBP19.23■□□□□ 0.67
SMC4-221ENST00000489573 TMEM123Q8N131 208 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 ZNF485Q8NCK3 441 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 FNDC9Q8TBE3 224 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 GATAD2BQ8WXI9 593 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 TMEM54Q969K7 222 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 FOXN4Q96NZ1 517 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 OPALINQ96PE5 141 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 FUNDC2Q9BWH2 189 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 PRRG4Q9BZD6 226 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 YIPF3Q9GZM5 350 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 PRDM14Q9GZV8 571 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 KLHL9Q9P2J3 617 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 RSL24D1Q9UHA3 163 aaKnown RBP19.23■□□□□ 0.67
SMC4-221ENST00000489573 IGKV3D-15A0A087WSY6 115 aa19.22■□□□□ 0.67
SMC4-221ENST00000489573 ZNF670-ZNF695F2Z2N8 137 aa19.22■□□□□ 0.67
SMC4-221ENST00000489573 PTGS2P35354 604 aa19.22■□□□□ 0.67
SMC4-221ENST00000489573 HSF2Q03933 536 aa19.22■□□□□ 0.67
SMC4-221ENST00000489573 MLLT11Q13015 90 aaPredicted RBP19.22■□□□□ 0.67
SMC4-221ENST00000489573 SLC25A47Q6Q0C1 308 aa19.22■□□□□ 0.67
SMC4-221ENST00000489573 CDC20BQ86Y33 519 aa19.22■□□□□ 0.67
SMC4-221ENST00000489573 OR6N1Q8NGY5 312 aa19.22■□□□□ 0.67
SMC4-221ENST00000489573 OR6N2Q8NGY6 317 aa19.22■□□□□ 0.67
SMC4-221ENST00000489573 ZNF420Q8TAQ5 688 aaPredicted RBP19.22■□□□□ 0.67
SMC4-221ENST00000489573 SPRYD4Q8WW59 207 aaPredicted RBP19.22■□□□□ 0.67
SMC4-221ENST00000489573 NSMAFQ92636 917 aa19.22■□□□□ 0.67
SMC4-221ENST00000489573 SARAFQ96BY9 339 aa19.22■□□□□ 0.67
SMC4-221ENST00000489573 INTS12Q96CB8 462 aaKnown RBP19.22■□□□□ 0.67
SMC4-221ENST00000489573 MRPL48Q96GC5 212 aaKnown RBP19.22■□□□□ 0.67
SMC4-221ENST00000489573 MNTQ99583 582 aa19.22■□□□□ 0.67
SMC4-221ENST00000489573 WDR76Q9H967 626 aa19.22■□□□□ 0.67
SMC4-221ENST00000489573 ISYNA1Q9NPH2 558 aa19.22■□□□□ 0.67
SMC4-221ENST00000489573 MRPL22Q9NWU5 206 aaKnown RBP19.22■□□□□ 0.67
SMC4-221ENST00000489573 GLTPQ9NZD2 209 aa19.22■□□□□ 0.67
SMC4-221ENST00000489573 ING1Q9UK53 422 aaPredicted RBP19.22■□□□□ 0.67
SMC4-221ENST00000489573 COPS3Q9UNS2 423 aa19.22■□□□□ 0.67
SMC4-221ENST00000489573 GPR171O14626 319 aa19.21■□□□□ 0.67
SMC4-221ENST00000489573 SCG5P05408 212 aa19.21■□□□□ 0.67
SMC4-221ENST00000489573 TGFBR2P37173 567 aa19.21■□□□□ 0.67
SMC4-221ENST00000489573 SELENOPP49908 381 aa19.21■□□□□ 0.67
SMC4-221ENST00000489573 TSTQ16762 297 aaKnown RBP19.21■□□□□ 0.67
SMC4-221ENST00000489573 SSX6Q7RTT6 188 aa19.21■□□□□ 0.67
SMC4-221ENST00000489573 AAED1Q7RTV5 226 aa19.21■□□□□ 0.67
SMC4-221ENST00000489573 GLB1L2Q8IW92 636 aa19.21■□□□□ 0.67
SMC4-221ENST00000489573 RFLNBQ8N5W9 214 aa19.21■□□□□ 0.67
SMC4-221ENST00000489573 MCHR2Q969V1 340 aa19.21■□□□□ 0.67
SMC4-221ENST00000489573 TMEM45BQ96B21 275 aa19.21■□□□□ 0.67
SMC4-221ENST00000489573 ZNF775Q96BV0 537 aaPredicted RBP19.21■□□□□ 0.67
SMC4-221ENST00000489573 ARHGAP9Q9BRR9 750 aa19.21■□□□□ 0.67
SMC4-221ENST00000489573 EMC3Q9P0I2 261 aa19.21■□□□□ 0.67
SMC4-221ENST00000489573 LUZP4Q9P127 313 aa19.21■□□□□ 0.67
SMC4-221ENST00000489573 MAP1BP46821 2468 aaKnown RBP19.21■□□□□ 0.67
SMC4-221ENST00000489573 KMT2BQ9UMN6 2715 aaPredicted RBP19.21■□□□□ 0.67
SMC4-221ENST00000489573 ZNF407Q9C0G0 2248 aa19.2■□□□□ 0.66
SMC4-221ENST00000489573 NOL3O60936 208 aaKnown RBP19.2■□□□□ 0.66
SMC4-221ENST00000489573 WISP2O76076 250 aa19.2■□□□□ 0.66
SMC4-221ENST00000489573 AQP8O94778 261 aa19.2■□□□□ 0.66
SMC4-221ENST00000489573 QDPRP09417 244 aa19.2■□□□□ 0.66
SMC4-221ENST00000489573 GAAP10253 952 aa19.2■□□□□ 0.66
SMC4-221ENST00000489573 CD36P16671 472 aa19.2■□□□□ 0.66
SMC4-221ENST00000489573 ACTA2P62736 377 aa19.2■□□□□ 0.66
SMC4-221ENST00000489573 ACTG2P63267 376 aa19.2■□□□□ 0.66
SMC4-221ENST00000489573 SLC26A10Q8NG04 563 aa19.2■□□□□ 0.66
SMC4-221ENST00000489573 ISOC1Q96CN7 298 aa19.2■□□□□ 0.66
SMC4-221ENST00000489573 MYCBPQ99417 103 aaPredicted RBP19.2■□□□□ 0.66
SMC4-221ENST00000489573 NAA50Q9GZZ1 169 aaKnown RBP19.2■□□□□ 0.66
SMC4-221ENST00000489573 ZNF175Q9Y473 711 aa19.2■□□□□ 0.66
SMC4-221ENST00000489573 ALPK2Q86TB3 2170 aa19.2■□□□□ 0.66
SMC4-221ENST00000489573 ZNF701M0R085 212 aaPredicted RBP19.19■□□□□ 0.66
SMC4-221ENST00000489573 SLC43A1O75387 559 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 MT-ND5P03915 603 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 FAM87AP0C7U9 286 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 RGS6P49758 472 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 ENTPD1P49961 510 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 ZNF133P52736 654 aaPredicted RBP19.19■□□□□ 0.66
SMC4-221ENST00000489573 TMBIM6P55061 237 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 ADAM8P78325 824 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 RNPS1Q15287 305 aaKnown RBP19.19■□□□□ 0.66
SMC4-221ENST00000489573 LINC00303Q3SY05 128 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 PLXDC2Q6UX71 529 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.19■□□□□ 0.66
SMC4-221ENST00000489573 P2RY8Q86VZ1 359 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 ANKRD13BQ86YJ7 626 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 C20orf196Q8IYI0 205 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 C4orf36Q96KX1 117 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 TTTY10Q9BZA0 68 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 ISG20L2Q9H9L3 353 aaKnown RBP19.19■□□□□ 0.66
SMC4-221ENST00000489573 RNF122Q9H9V4 155 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 ZNF71Q9NQZ8 489 aaPredicted RBP19.19■□□□□ 0.66
SMC4-221ENST00000489573 ENPP5Q9UJA9 477 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms