RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 PRPS1P60891 318 aa6.87□□□□□ -1.31
SSR1-210ENST00000489567 RPL27P61353 136 aaKnown RBP6.87□□□□□ -1.31
SSR1-210ENST00000489567 LCN6P62502 163 aa6.87□□□□□ -1.31
SSR1-210ENST00000489567 TGFBR3Q03167 851 aa6.87□□□□□ -1.31
SSR1-210ENST00000489567 MICAQ29983 383 aa6.87□□□□□ -1.31
SSR1-210ENST00000489567 ANKDD1AQ495B1 522 aa6.87□□□□□ -1.31
SSR1-210ENST00000489567 MESTQ5EB52 335 aa6.87□□□□□ -1.31
SSR1-210ENST00000489567 ANKRD16Q6P6B7 361 aa6.87□□□□□ -1.31
SSR1-210ENST00000489567 P2RY8Q86VZ1 359 aa6.87□□□□□ -1.31
SSR1-210ENST00000489567 AQP11Q8NBQ7 271 aa6.87□□□□□ -1.31
SSR1-210ENST00000489567 NOXO1Q8NFA2 376 aa6.87□□□□□ -1.31
SSR1-210ENST00000489567 CHAC2Q8WUX2 184 aa6.87□□□□□ -1.31
SSR1-210ENST00000489567 POP5Q969H6 163 aaKnown RBP6.87□□□□□ -1.31
SSR1-210ENST00000489567 MCHR2Q969V1 340 aa6.87□□□□□ -1.31
SSR1-210ENST00000489567 MUCL1Q96DR8 90 aa6.87□□□□□ -1.31
SSR1-210ENST00000489567 GPX7Q96SL4 187 aaPredicted RBP6.87□□□□□ -1.31
SSR1-210ENST00000489567 OR52D1Q9H346 318 aa6.87□□□□□ -1.31
SSR1-210ENST00000489567 EGLN3Q9H6Z9 239 aa6.87□□□□□ -1.31
SSR1-210ENST00000489567 PLEKHF2Q9H8W4 249 aa6.87□□□□□ -1.31
SSR1-210ENST00000489567 NTN4Q9HB63 628 aa6.87□□□□□ -1.31
SSR1-210ENST00000489567 ZNF224Q9NZL3 707 aa6.87□□□□□ -1.31
SSR1-210ENST00000489567 MAGED1Q9Y5V3 778 aaPredicted RBP6.87□□□□□ -1.31
SSR1-210ENST00000489567 ITPR2Q14571 2701 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 B4GALT1P15291 398 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 ACVR1BP36896 505 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 ZNF83P51522 516 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 CLRN1P58418 232 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 BSPH1Q075Z2 132 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 SPOCK1Q08629 439 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 TSPAN31Q12999 210 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 MRPL28Q13084 256 aaKnown RBP6.86□□□□□ -1.31
SSR1-210ENST00000489567 BEX5Q5H9J7 111 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 NCMAPQ5T1S8 102 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 FBXW10Q5XX13 1052 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 SMARCD3Q6STE5 483 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 KLHL24Q6TFL4 600 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 ZNF620Q6ZNG0 422 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 ZNF627Q7L945 461 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 MYPOPQ86VE0 399 aaPredicted RBP6.86□□□□□ -1.31
SSR1-210ENST00000489567 C17orf78Q8N4C9 275 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 ARIH2OSQ8N7S6 290 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 FGFBP3Q8TAT2 258 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 FANK1Q8TC84 345 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 GNPDA2Q8TDQ7 276 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 GTPBP3Q969Y2 492 aaKnown RBP6.86□□□□□ -1.31
SSR1-210ENST00000489567 RASD2Q96D21 266 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 SAMD8Q96LT4 415 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 FOXB1Q99853 325 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 NIPSNAP1Q9BPW8 284 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 USB1Q9BQ65 265 aaKnown RBP6.86□□□□□ -1.31
SSR1-210ENST00000489567 PLA2G12AQ9BZM1 189 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 SEC61A2Q9H9S3 476 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 NOX3Q9HBY0 568 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 KRCC1Q9NPI7 259 aaPredicted RBP6.86□□□□□ -1.31
SSR1-210ENST00000489567 NRIP3Q9NQ35 241 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 IER3IP1Q9Y5U9 82 aa6.86□□□□□ -1.31
SSR1-210ENST00000489567 A0A0B4J203 849 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 TEX13CA0A0J9YWL9 993 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 DHHO43323 396 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 PPP1R3DO95685 299 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 TP53P04637 393 aaPredicted RBP6.85□□□□□ -1.31
SSR1-210ENST00000489567 PATE4P0C8F1 98 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 PRKACGP22612 351 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 CDAP32320 146 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 IFNGR2P38484 337 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 ZNF133P52736 654 aaPredicted RBP6.85□□□□□ -1.31
SSR1-210ENST00000489567 CD47Q08722 323 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 KPNB1Q14974 876 aaKnown RBP6.85□□□□□ -1.31
SSR1-210ENST00000489567 ETFDHQ16134 617 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 RFX4Q33E94 735 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 FIP1L1Q6UN15 594 aaKnown RBP6.85□□□□□ -1.31
SSR1-210ENST00000489567 ZNF813Q6ZN06 617 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 DPY19L2P2Q6ZN68 376 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 PTCHD4Q6ZW05 846 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 OR10G2Q8NGC3 310 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 OR8D4Q8NGM9 314 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 LILRB1Q8NHL6 650 aaPredicted RBP6.85□□□□□ -1.31
SSR1-210ENST00000489567 MAGEE2Q8TD90 523 aaPredicted RBP6.85□□□□□ -1.31
SSR1-210ENST00000489567 NSMAFQ92636 917 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 NEUROG1Q92886 237 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 DUS3LQ96G46 650 aaKnown RBP6.85□□□□□ -1.31
SSR1-210ENST00000489567 ZNF570Q96NI8 536 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 FEVQ99581 238 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 TMEM204Q9BSN7 226 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 B3GAT2Q9NPZ5 323 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 TMEM38BQ9NVV0 291 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 GRHPRQ9UBQ7 328 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 DNAJB9Q9UBS3 223 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 POFUT2Q9Y2G5 429 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 AMDHD2Q9Y303 409 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 UGT2A1Q9Y4X1 527 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 PDZD2O15018 2839 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 TACC2O95359 2948 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 ABCA12Q86UK0 2595 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 ABCA4P78363 2273 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 ARPC4-TTLL3A0A0A6YYG9 625 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 CENPBD1B2RD01 187 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 M0R1B8 84 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 SOCS2O14508 198 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 GNGT2O14610 69 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms