RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 FABP6P51161 128 aa15.09■□□□□ 0.01
MDC1-206ENST00000489540 IDH3GP51553 393 aaPredicted RBP15.09■□□□□ 0.01
MDC1-206ENST00000489540 RAB1AP62820 205 aa15.09■□□□□ 0.01
MDC1-206ENST00000489540 NKX6-1P78426 367 aaPredicted RBP15.09■□□□□ 0.01
MDC1-206ENST00000489540 PIGFQ07326 219 aa15.09■□□□□ 0.01
MDC1-206ENST00000489540 NPRL3Q12980 569 aa15.09■□□□□ 0.01
MDC1-206ENST00000489540 GPR139Q6DWJ6 353 aa15.09■□□□□ 0.01
MDC1-206ENST00000489540 C1orf94Q6P1W5 598 aa15.09■□□□□ 0.01
MDC1-206ENST00000489540 SMARCD3Q6STE5 483 aa15.09■□□□□ 0.01
MDC1-206ENST00000489540 DPY19L2P2Q6ZN68 376 aa15.09■□□□□ 0.01
MDC1-206ENST00000489540 DTX2Q86UW9 622 aa15.09■□□□□ 0.01
MDC1-206ENST00000489540 SKA3Q8IX90 412 aa15.09■□□□□ 0.01
MDC1-206ENST00000489540 FBXL14Q8N1E6 418 aa15.09■□□□□ 0.01
MDC1-206ENST00000489540 GPX7Q96SL4 187 aaPredicted RBP15.09■□□□□ 0.01
MDC1-206ENST00000489540 GPA33Q99795 319 aa15.09■□□□□ 0.01
MDC1-206ENST00000489540 GSX2Q9BZM3 304 aa15.09■□□□□ 0.01
MDC1-206ENST00000489540 SIAEQ9HAT2 523 aa15.09■□□□□ 0.01
MDC1-206ENST00000489540 NRIP3Q9NQ35 241 aa15.09■□□□□ 0.01
MDC1-206ENST00000489540 ZNF701Q9NV72 531 aaPredicted RBP15.09■□□□□ 0.01
MDC1-206ENST00000489540 HRNRQ86YZ3 2850 aaPredicted RBP15.08■□□□□ 0
MDC1-206ENST00000489540 OVOL3O00110 214 aa15.08■□□□□ 0
MDC1-206ENST00000489540 RAB36O95755 333 aa15.08■□□□□ 0
MDC1-206ENST00000489540 APOBEC3AP31941 199 aaPredicted RBP15.08■□□□□ 0
MDC1-206ENST00000489540 TTKP33981 857 aa15.08■□□□□ 0
MDC1-206ENST00000489540 GUCA1AP43080 201 aaPredicted RBP15.08■□□□□ 0
MDC1-206ENST00000489540 MRPS34P82930 218 aaKnown RBP15.08■□□□□ 0
MDC1-206ENST00000489540 OR2T5Q6IEZ7 315 aa15.08■□□□□ 0
MDC1-206ENST00000489540 SLC25A47Q6Q0C1 308 aa15.08■□□□□ 0
MDC1-206ENST00000489540 FAM122BQ7Z309 247 aa15.08■□□□□ 0
MDC1-206ENST00000489540 LURAP1LQ8IV03 231 aa15.08■□□□□ 0
MDC1-206ENST00000489540 OR4F15Q8NGB8 312 aa15.08■□□□□ 0
MDC1-206ENST00000489540 OR2T29Q8NH02 315 aa15.08■□□□□ 0
MDC1-206ENST00000489540 TRAF4Q9BUZ4 470 aaPredicted RBP15.08■□□□□ 0
MDC1-206ENST00000489540 CHID1Q9BWS9 393 aa15.08■□□□□ 0
MDC1-206ENST00000489540 KCNN2Q9H2S1 579 aa15.08■□□□□ 0
MDC1-206ENST00000489540 ZNF224Q9NZL3 707 aa15.08■□□□□ 0
MDC1-206ENST00000489540 ADAM18Q9Y3Q7 739 aa15.08■□□□□ 0
MDC1-206ENST00000489540 CCNB2O95067 398 aa15.07■□□□□ 0
MDC1-206ENST00000489540 SLC2A10O95528 541 aa15.07■□□□□ 0
MDC1-206ENST00000489540 APEHP13798 732 aaKnown RBP15.07■□□□□ 0
MDC1-206ENST00000489540 SDHAP31040 664 aa15.07■□□□□ 0
MDC1-206ENST00000489540 GIPRP48546 466 aa15.07■□□□□ 0
MDC1-206ENST00000489540 GSSP48637 474 aa15.07■□□□□ 0
MDC1-206ENST00000489540 PTDSS1P48651 473 aaKnown RBP15.07■□□□□ 0
MDC1-206ENST00000489540 RPS6KA3P51812 740 aa15.07■□□□□ 0
MDC1-206ENST00000489540 TSPAN31Q12999 210 aa15.07■□□□□ 0
MDC1-206ENST00000489540 FLOT2Q14254 428 aa15.07■□□□□ 0
MDC1-206ENST00000489540 GK3PQ14409 553 aa15.07■□□□□ 0
MDC1-206ENST00000489540 RFX4Q33E94 735 aa15.07■□□□□ 0
MDC1-206ENST00000489540 SLC36A2Q495M3 483 aa15.07■□□□□ 0
MDC1-206ENST00000489540 PGBD2Q6P3X8 592 aa15.07■□□□□ 0
MDC1-206ENST00000489540 PRSS57Q6UWY2 283 aa15.07■□□□□ 0
MDC1-206ENST00000489540 B3GLCTQ6Y288 498 aa15.07■□□□□ 0
MDC1-206ENST00000489540 SLC16A14Q7RTX9 510 aa15.07■□□□□ 0
MDC1-206ENST00000489540 ADGRG5Q8IZF4 528 aa15.07■□□□□ 0
MDC1-206ENST00000489540 MUC15Q8N387 334 aa15.07■□□□□ 0
MDC1-206ENST00000489540 OR4C15Q8NGM1 316 aa15.07■□□□□ 0
MDC1-206ENST00000489540 NSMAFQ92636 917 aa15.07■□□□□ 0
MDC1-206ENST00000489540 GTPBP3Q969Y2 492 aaKnown RBP15.07■□□□□ 0
MDC1-206ENST00000489540 TRMT61AQ96FX7 289 aaKnown RBP15.07■□□□□ 0
MDC1-206ENST00000489540 Q96M85 177 aa15.07■□□□□ 0
MDC1-206ENST00000489540 ZNF570Q96NI8 536 aa15.07■□□□□ 0
MDC1-206ENST00000489540 SH3GL3Q99963 347 aa15.07■□□□□ 0
MDC1-206ENST00000489540 CADM1Q9BY67 442 aaKnown RBP15.07■□□□□ 0
MDC1-206ENST00000489540 REEP1Q9H902 201 aa15.07■□□□□ 0
MDC1-206ENST00000489540 RNF121Q9H920 327 aa15.07■□□□□ 0
MDC1-206ENST00000489540 POMPQ9Y244 141 aa15.07■□□□□ 0
MDC1-206ENST00000489540 UGT2A1Q9Y4X1 527 aa15.07■□□□□ 0
MDC1-206ENST00000489540 PRRC2AP48634 2157 aaKnown RBP15.06■□□□□ 0
MDC1-206ENST00000489540 OTOGQ6ZRI0 2925 aa15.06■□□□□ 0
MDC1-206ENST00000489540 DHRS12A0PJE2 317 aa15.06■□□□□ 0
MDC1-206ENST00000489540 PRSS37A4D1T9 235 aa15.06■□□□□ 0
MDC1-206ENST00000489540 VSTM5A8MXK1 200 aa15.06■□□□□ 0
MDC1-206ENST00000489540 IMPA2O14732 288 aa15.06■□□□□ 0
MDC1-206ENST00000489540 TXNDC12O95881 172 aa15.06■□□□□ 0
MDC1-206ENST00000489540 CD8AP01732 235 aa15.06■□□□□ 0
MDC1-206ENST00000489540 CELA3BP08861 270 aa15.06■□□□□ 0
MDC1-206ENST00000489540 ZNF14P17017 642 aaPredicted RBP15.06■□□□□ 0
MDC1-206ENST00000489540 SLC6A6P31641 620 aa15.06■□□□□ 0
MDC1-206ENST00000489540 PTH2RP49190 550 aa15.06■□□□□ 0
MDC1-206ENST00000489540 FXYD6P3P58550 94 aa15.06■□□□□ 0
MDC1-206ENST00000489540 ADAM8P78325 824 aa15.06■□□□□ 0
MDC1-206ENST00000489540 FMODQ06828 376 aa15.06■□□□□ 0
MDC1-206ENST00000489540 TMEM53Q6P2H8 277 aa15.06■□□□□ 0
MDC1-206ENST00000489540 THSD4Q6ZMP0 1018 aa15.06■□□□□ 0
MDC1-206ENST00000489540 TGIF2LYQ8IUE0 185 aa15.06■□□□□ 0
MDC1-206ENST00000489540 PERPQ96FX8 193 aa15.06■□□□□ 0
MDC1-206ENST00000489540 ZNF75AQ96N20 296 aa15.06■□□□□ 0
MDC1-206ENST00000489540 MMADHCQ9H3L0 296 aaPredicted RBP15.06■□□□□ 0
MDC1-206ENST00000489540 SEC61A2Q9H9S3 476 aa15.06■□□□□ 0
MDC1-206ENST00000489540 NOX3Q9HBY0 568 aa15.06■□□□□ 0
MDC1-206ENST00000489540 CBLN4Q9NTU7 201 aa15.06■□□□□ 0
MDC1-206ENST00000489540 SAMHD1Q9Y3Z3 626 aaKnown RBP15.06■□□□□ 0
MDC1-206ENST00000489540 IER3IP1Q9Y5U9 82 aa15.06■□□□□ 0
MDC1-206ENST00000489540 IGKV1D-43A0A0B4J1Z2 117 aa15.05■□□□□ -0
MDC1-206ENST00000489540 IGHV2OR16-5A0A0B4J2B6 119 aa15.05■□□□□ -0
MDC1-206ENST00000489540 TEX13CA0A0J9YWL9 993 aa15.05■□□□□ -0
MDC1-206ENST00000489540 SLC22A23A1A5C7 686 aa15.05■□□□□ -0
MDC1-206ENST00000489540 SERPINA5P05154 406 aa15.05■□□□□ -0
MDC1-206ENST00000489540 BMP4P12644 408 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms