RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 ZNF726A6NNF4 738 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.72□□□□□ -1.49
SF3A3-208ENST00000489537 ARHGEF9O43307 516 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 PFDN1O60925 122 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 UPK1BO75841 260 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 SLC2A10O95528 541 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 IGLV1-40P01703 118 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 IGHG1P01857 330 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 HLA-DQA2P01906 255 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 CD2P06729 351 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 UMODP07911 640 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 OCM2P0CE71 109 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 OCMP0CE72 109 aaPredicted RBP5.72□□□□□ -1.49
SF3A3-208ENST00000489537 ZNF28P17035 718 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 ZNF43P17038 809 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 NR4A1P22736 598 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 EDNRAP25101 427 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 MST1P26927 711 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 DPP4P27487 766 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 RBMS1P29558 406 aaKnown RBP5.72□□□□□ -1.49
SF3A3-208ENST00000489537 RPS19P39019 145 aaKnown RBP5.72□□□□□ -1.49
SF3A3-208ENST00000489537 CDKN2AP42771 156 aaKnown RBP5.72□□□□□ -1.49
SF3A3-208ENST00000489537 NR4A2P43354 598 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 RPS3AP61247 264 aaKnown RBP5.72□□□□□ -1.49
SF3A3-208ENST00000489537 PITPNAQ00169 270 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 HSF1Q00613 529 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 ROM1Q03395 351 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 AIMP2Q13155 320 aaKnown RBP5.72□□□□□ -1.49
SF3A3-208ENST00000489537 DNASE1L3Q13609 305 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 RIN1Q13671 783 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 CDK5R1Q15078 307 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 POU4F3Q15319 338 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 TRIP6Q15654 476 aaKnown RBP5.72□□□□□ -1.49
SF3A3-208ENST00000489537 FAM189A2Q15884 450 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 ACKR1Q16570 336 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 ABHD17BQ5VST6 288 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 TIGD3Q6B0B8 471 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 TMEM225Q6GV28 225 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 C22orf42Q6IC83 251 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 PAQR6Q6TCH4 344 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 ZNF704Q6ZNC4 412 aaPredicted RBP5.72□□□□□ -1.49
SF3A3-208ENST00000489537 TMPPEQ6ZT21 453 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 CCDC190Q86UF4 302 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 CDH24Q86UP0 819 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 LRRC28Q86X40 367 aaPredicted RBP5.72□□□□□ -1.49
SF3A3-208ENST00000489537 MEX3DQ86XN8 651 aaKnown RBP5.72□□□□□ -1.49
SF3A3-208ENST00000489537 CDC20BQ86Y33 519 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 ZNF679Q8IYX0 411 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 LRRC17Q8N6Y2 441 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 YIPF7Q8N8F6 280 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 CLEC1AQ8NC01 280 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 OR2M3Q8NG83 312 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 OR10H5Q8NGA6 315 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 OR10G3Q8NGC4 313 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 OR6X1Q8NH79 312 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 ZNF519Q8TB69 540 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 THAP3Q8WTV1 239 aaPredicted RBP5.72□□□□□ -1.49
SF3A3-208ENST00000489537 DEDD2Q8WXF8 326 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 PMEPA1Q969W9 287 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 MIB2Q96AX9 1013 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 C8orf44Q96CB5 159 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 ZMYND19Q96E35 227 aaPredicted RBP5.72□□□□□ -1.49
SF3A3-208ENST00000489537 TSPAN32Q96QS1 320 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 ZNF649Q9BS31 505 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 WACQ9BTA9 647 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 PTDSS2Q9BVG9 487 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 MOB1AQ9H8S9 216 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 QPCTLQ9NXS2 382 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 TAS2R16Q9NYV7 291 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 TAS2R5Q9NYW4 299 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 MED11Q9P086 117 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 GNG8Q9UK08 70 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 B9D1Q9UPM9 204 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 ADAM18Q9Y3Q7 739 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 TP53BP1Q12888 1972 aaPredicted RBP5.72□□□□□ -1.49
SF3A3-208ENST00000489537 ANKRD11Q6UB99 2663 aaPredicted RBP5.72□□□□□ -1.49
SF3A3-208ENST00000489537 FAM208BQ5VWN6 2430 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 SLC22A23A1A5C7 686 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 FABP12A6NFH5 140 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 ACOD1A6NK06 481 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 AQP7P3A6NL99 342 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 NOTOA8MTQ0 251 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 FTCDNL1E5RQL4 147 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 SULT2B1O00204 365 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 PRKNO60260 465 aaPredicted RBP5.71□□□□□ -1.5
SF3A3-208ENST00000489537 SC5DO75845 299 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 F13BP05160 661 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 UCHL1P09936 223 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 FTH1P19P0C7X4 201 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 LIFP15018 202 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 ALOX5APP20292 161 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 RAB3BP20337 219 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 INPP1P49441 399 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 GDI2P50395 445 aaKnown RBP5.71□□□□□ -1.5
SF3A3-208ENST00000489537 RIDAP52758 137 aaKnown RBP5.71□□□□□ -1.5
SF3A3-208ENST00000489537 EFNA3P52797 238 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 RPS25P62851 125 aaKnown RBP5.71□□□□□ -1.5
SF3A3-208ENST00000489537 MRPS10P82664 201 aaKnown RBP5.71□□□□□ -1.5
SF3A3-208ENST00000489537 FABP5Q01469 135 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 ZNF85Q03923 595 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms