RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 FKBP7Q9Y680 259 aa4.98□□□□□ -1.61
ATG4A-208ENST00000489247 CHCHD2Q9Y6H1 151 aaPredicted RBP4.98□□□□□ -1.61
ATG4A-208ENST00000489247 COL27A1Q8IZC6 1860 aaPredicted RBP4.98□□□□□ -1.61
ATG4A-208ENST00000489247 SPTBP11277 2137 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 SEC16AO15027 2179 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 RP1P56715 2156 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 FER1L5A0AVI2 2057 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 IGLV1-36A0A0B4J1U3 117 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 TRAV1-2A0A0B4J238 106 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 A0A0G2JNJ9 132 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 TEX13CA0A0J9YWL9 993 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 A0A1B0GVG6 124 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 A0A1W2PNV4 684 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 C17orf51A8MQB3 221 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 VSTM5A8MXK1 200 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 LOC110117498-PIK3R3F6TDL0 507 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 J3QRK9 145 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 GABRPO00591 440 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 TP53I11O14683 189 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 RNF13O43567 381 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 SCO2O43819 266 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 TRIM3O75382 744 aaPredicted RBP4.97□□□□□ -1.61
ATG4A-208ENST00000489247 UPK1BO75841 260 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 AHSA1O95433 338 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 ABHD16AO95870 558 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 HIST1H2ABP04908 130 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 CLUP10909 449 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 CELP19835 753 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 ITPKBP27987 946 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 GRPRP30550 384 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 S100A5P33763 92 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 PTGS2P35354 604 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 ATP6V1E1P36543 226 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 EIF1P41567 113 aaKnown RBP4.97□□□□□ -1.61
ATG4A-208ENST00000489247 CASP3P42574 277 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 FOXL2P58012 376 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 MLF1P58340 268 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 KRTAP10-2P60368 255 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 RPL27P61353 136 aaKnown RBP4.97□□□□□ -1.61
ATG4A-208ENST00000489247 ERVK-25P63136 954 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 IFITM3Q01628 133 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 RIN1Q13671 783 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 CDK5R1Q15078 307 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 PCK2Q16822 640 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 ZNF181Q2M3W8 571 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 RGS21Q2M5E4 152 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 PLPPR5Q32ZL2 321 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 GFOD2Q3B7J2 385 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 KLHL12Q53G59 568 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 DCAF12Q5T6F0 453 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 TMEM200BQ69YZ2 307 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 TCEAL6Q6IPX3 200 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 RPL22L1Q6P5R6 122 aaKnown RBP4.97□□□□□ -1.61
ATG4A-208ENST00000489247 C16orf87Q6PH81 154 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 OPN5Q6U736 354 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 UNQ9370/PRO34162Q6UXP9 181 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 DCDC5Q6ZRR9 648 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 NDUFAF7Q7L592 441 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 HIST3H2AQ7L7L0 130 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 PPP1R32Q7Z5V6 425 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 GLRX5Q86SX6 157 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 TPRA1Q86W33 373 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 CDC20BQ86Y33 519 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 NAXDQ8IW45 347 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 SLC35F2Q8IXU6 374 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 LSM14AQ8ND56 463 aaKnown RBP4.97□□□□□ -1.61
ATG4A-208ENST00000489247 OR2M3Q8NG83 312 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 OR10H4Q8NGA5 316 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 OR11G2Q8NGC1 345 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 OR2T4Q8NH00 348 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 POC1BQ8TC44 478 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 ZPLD1Q8TCW7 415 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 PAQR8Q8TEZ7 354 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 SLC25A43Q8WUT9 341 aaPredicted RBP4.97□□□□□ -1.61
ATG4A-208ENST00000489247 ZNRF4Q8WWF5 429 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 ACOT12Q8WYK0 555 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 AP3S1Q92572 193 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 HIST1H2ACQ93077 130 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 MR1Q95460 341 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 TCEAL3Q969E4 200 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 C8orf44Q96CB5 159 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 SMIM19Q96E16 107 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 PELI1Q96FA3 418 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 TSPAN32Q96QS1 320 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 TAAR9Q96RI9 348 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 NMNAT3Q96T66 252 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 ALG12Q9BV10 488 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 ANGPTL4Q9BY76 406 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 DEFB126Q9BYW3 111 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 ULBP3Q9BZM4 244 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 STRADBQ9C0K7 418 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 NUAK2Q9H093 628 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 TXNIPQ9H3M7 391 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 INIPQ9NRY2 104 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 FAIMQ9NVQ4 179 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 QPCTLQ9NXS2 382 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 SLC39A1Q9NY26 324 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 NCDNQ9UBB6 729 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 Q9UFV3 132 aa4.97□□□□□ -1.61
ATG4A-208ENST00000489247 B3GALT5Q9Y2C3 310 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms