RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 GPR45Q9Y5Y3 372 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 IQCMA0A1B0GVH7 501 aa13.62□□□□□ -0.23
USP48-210ENST00000489108 PLSCR5A0PG75 271 aa13.62□□□□□ -0.23
USP48-210ENST00000489108 C11orf98E9PRG8 122 aa13.62□□□□□ -0.23
USP48-210ENST00000489108 FARS2O95363 451 aaKnown RBP13.62□□□□□ -0.23
USP48-210ENST00000489108 ALDOCP09972 364 aaKnown RBP13.62□□□□□ -0.23
USP48-210ENST00000489108 MYZAPP0CAP1 466 aa13.62□□□□□ -0.23
USP48-210ENST00000489108 CCNOP22674 350 aa13.62□□□□□ -0.23
USP48-210ENST00000489108 RAG2P55895 527 aa13.62□□□□□ -0.23
USP48-210ENST00000489108 RELBQ01201 579 aa13.62□□□□□ -0.23
USP48-210ENST00000489108 LRRC74AQ0VAA2 488 aa13.62□□□□□ -0.23
USP48-210ENST00000489108 ZNF718Q3SXZ3 478 aa13.62□□□□□ -0.23
USP48-210ENST00000489108 PDCD4Q53EL6 469 aaKnown RBP13.62□□□□□ -0.23
USP48-210ENST00000489108 ASPHD2Q6ICH7 369 aa13.62□□□□□ -0.23
USP48-210ENST00000489108 KLHL36Q8N4N3 616 aa13.62□□□□□ -0.23
USP48-210ENST00000489108 C10orf53Q8N6V4 93 aa13.62□□□□□ -0.23
USP48-210ENST00000489108 CPEB3Q8NE35 698 aaKnown RBP13.62□□□□□ -0.23
USP48-210ENST00000489108 IPCEF1Q8WWN9 437 aaPredicted RBP13.62□□□□□ -0.23
USP48-210ENST00000489108 UBE2FQ969M7 185 aa13.62□□□□□ -0.23
USP48-210ENST00000489108 DIRC2Q96SL1 478 aa13.62□□□□□ -0.23
USP48-210ENST00000489108 EPYCQ99645 322 aa13.62□□□□□ -0.23
USP48-210ENST00000489108 NUF2Q9BZD4 464 aa13.62□□□□□ -0.23
USP48-210ENST00000489108 C20orf27Q9GZN8 174 aa13.62□□□□□ -0.23
USP48-210ENST00000489108 DHHO43323 396 aa13.61□□□□□ -0.23
USP48-210ENST00000489108 ENTPD5O75356 428 aa13.61□□□□□ -0.23
USP48-210ENST00000489108 PLATP00750 562 aa13.61□□□□□ -0.23
USP48-210ENST00000489108 CRYBA1P05813 215 aa13.61□□□□□ -0.23
USP48-210ENST00000489108 ADORA3P0DMS8 318 aa13.61□□□□□ -0.23
USP48-210ENST00000489108 PLP2Q04941 152 aa13.61□□□□□ -0.23
USP48-210ENST00000489108 SLC36A2Q495M3 483 aa13.61□□□□□ -0.23
USP48-210ENST00000489108 ULK3Q6PHR2 472 aa13.61□□□□□ -0.23
USP48-210ENST00000489108 SLC16A14Q7RTX9 510 aa13.61□□□□□ -0.23
USP48-210ENST00000489108 COMTD1Q86VU5 262 aa13.61□□□□□ -0.23
USP48-210ENST00000489108 LRRC28Q86X40 367 aaPredicted RBP13.61□□□□□ -0.23
USP48-210ENST00000489108 NUDCD3Q8IVD9 361 aa13.61□□□□□ -0.23
USP48-210ENST00000489108 SPICQ8N5J4 248 aa13.61□□□□□ -0.23
USP48-210ENST00000489108 RBM15BQ8NDT2 890 aaKnown RBP13.61□□□□□ -0.23
USP48-210ENST00000489108 OR6X1Q8NH79 312 aa13.61□□□□□ -0.23
USP48-210ENST00000489108 SLC47A1Q96FL8 570 aa13.61□□□□□ -0.23
USP48-210ENST00000489108 MARS2Q96GW9 593 aaKnown RBP13.61□□□□□ -0.23
USP48-210ENST00000489108 TPT1P8Q9HAU6 139 aa13.61□□□□□ -0.23
USP48-210ENST00000489108 BCL2L10Q9HD36 194 aa13.61□□□□□ -0.23
USP48-210ENST00000489108 C1RLQ9NZP8 487 aa13.61□□□□□ -0.23
USP48-210ENST00000489108 CLPSL1A2RUU4 121 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 WDR91A4D1P6 747 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 TMEM247A6NEH6 219 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 A8MXK9 166 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 NGFP01138 241 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 ADH4P08319 380 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 QDPRP09417 244 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 NUDT7P0C024 238 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 APLNRP35414 380 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 RPL14P50914 215 aaKnown RBP13.6□□□□□ -0.23
USP48-210ENST00000489108 ABCE1P61221 599 aaKnown RBP13.6□□□□□ -0.23
USP48-210ENST00000489108 DEFB112Q30KQ8 113 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 GTDC1Q4AE62 458 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 FAM91A1Q658Y4 838 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 FIP1L1Q6UN15 594 aaKnown RBP13.6□□□□□ -0.23
USP48-210ENST00000489108 SLC35D2Q76EJ3 337 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 DPPA2Q7Z7J5 298 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 ZNF101Q8IZC7 436 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 SLC25A40Q8TBP6 338 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 ANP32BQ92688 251 aaKnown RBP13.6□□□□□ -0.23
USP48-210ENST00000489108 MAL2Q969L2 176 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 ZDHHC16Q969W1 377 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 PKNOX2Q96KN3 472 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 AIG1Q9NVV5 245 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 KLHL21Q9UJP4 597 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 RAP2CQ9Y3L5 183 aa13.6□□□□□ -0.23
USP48-210ENST00000489108 SRRM5B3KS81 715 aa13.59□□□□□ -0.23
USP48-210ENST00000489108 ANP32DO95626 131 aa13.59□□□□□ -0.23
USP48-210ENST00000489108 MMP7P09237 267 aaPredicted RBP13.59□□□□□ -0.23
USP48-210ENST00000489108 SELEP16581 610 aa13.59□□□□□ -0.23
USP48-210ENST00000489108 WNT5AP41221 380 aa13.59□□□□□ -0.23
USP48-210ENST00000489108 TMEM155Q4W5P6 130 aa13.59□□□□□ -0.23
USP48-210ENST00000489108 OGFOD2Q6N063 350 aa13.59□□□□□ -0.23
USP48-210ENST00000489108 LRRC18Q8N456 261 aa13.59□□□□□ -0.23
USP48-210ENST00000489108 OR5J2Q8NH18 312 aa13.59□□□□□ -0.23
USP48-210ENST00000489108 KLF14Q8TD94 323 aaPredicted RBP13.59□□□□□ -0.23
USP48-210ENST00000489108 ZNF566Q969W8 418 aa13.59□□□□□ -0.23
USP48-210ENST00000489108 VPS33AQ96AX1 596 aa13.59□□□□□ -0.23
USP48-210ENST00000489108 UPRTQ96BW1 309 aa13.59□□□□□ -0.23
USP48-210ENST00000489108 SLC25A44Q96H78 314 aaPredicted RBP13.59□□□□□ -0.23
USP48-210ENST00000489108 OR2J1Q9GZK6 312 aa13.59□□□□□ -0.23
USP48-210ENST00000489108 MSL2Q9HCI7 577 aa13.59□□□□□ -0.23
USP48-210ENST00000489108 CYSLTR2Q9NS75 346 aa13.59□□□□□ -0.23
USP48-210ENST00000489108 TMEM106BQ9NUM4 274 aa13.59□□□□□ -0.23
USP48-210ENST00000489108 THUMPD1Q9NXG2 353 aaKnown RBP13.59□□□□□ -0.23
USP48-210ENST00000489108 SELENONQ9NZV5 590 aa13.59□□□□□ -0.23
USP48-210ENST00000489108 OR5V1Q9UGF6 321 aa13.59□□□□□ -0.23
USP48-210ENST00000489108 ZDHHC8Q9ULC8 765 aa13.59□□□□□ -0.23
USP48-210ENST00000489108 TRAV40A0A0B4J280 105 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 F5H0A9 414 aaPredicted RBP13.58□□□□□ -0.24
USP48-210ENST00000489108 TPST1O60507 370 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 NDUFA7O95182 113 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 OR6A2O95222 327 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 CD55P08174 381 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 ZCCHC18P0CG32 403 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 PPIAL4GP0DN37 164 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 STOMP27105 288 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms