RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 IL17RDQ8NFM7 739 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 SMAP2Q8WU79 429 aaPredicted RBP13.12□□□□□ -0.31
CXCL12-207ENST00000488591 NSMAFQ92636 917 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 NEUROG1Q92886 237 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 Q96M85 177 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 GPX7Q96SL4 187 aaPredicted RBP13.12□□□□□ -0.31
CXCL12-207ENST00000488591 GPA33Q99795 319 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 KCNN2Q9H2S1 579 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 NRIP3Q9NQ35 241 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 SLC7A8Q9UHI5 535 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 FBXL3Q9UKT7 428 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 MOKQ9UQ07 419 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 ADAM18Q9Y3Q7 739 aa13.12□□□□□ -0.31
CXCL12-207ENST00000488591 HEATR1Q9H583 2144 aaKnown RBP13.12□□□□□ -0.31
CXCL12-207ENST00000488591 CCDC168Q8NDH2 2452 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 TEX13CA0A0J9YWL9 993 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 SLC2A10O95528 541 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 IGLV1-44P01699 117 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 CECR9P0C854 216 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 SDHAP31040 664 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 SLC6A6P31641 620 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 IDH3GP51553 393 aaPredicted RBP13.11□□□□□ -0.31
CXCL12-207ENST00000488591 RAB1AP62820 205 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 MRPS34P82930 218 aaKnown RBP13.11□□□□□ -0.31
CXCL12-207ENST00000488591 SPOCK1Q08629 439 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 NPRL3Q12980 569 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 MICAQ29983 383 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 SLC36A2Q495M3 483 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 RPL13AP3Q6NVV1 102 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 SLC16A14Q7RTX9 510 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 FAM122BQ7Z309 247 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 OR4C15Q8NGM1 316 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 SH3GL3Q99963 347 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 IFT27Q9BW83 186 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 LRMDAQ9H2I8 198 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 OR52D1Q9H346 318 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 CXorf56Q9H5V9 222 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 RNF121Q9H920 327 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 SIAEQ9HAT2 523 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 B3GNT2Q9NY97 397 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 IL20RAQ9UHF4 553 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 LAMP3Q9UQV4 416 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 IER3IP1Q9Y5U9 82 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 U3KQV3 271 aa13.11□□□□□ -0.31
CXCL12-207ENST00000488591 RAI1Q7Z5J4 1906 aaPredicted RBP13.11□□□□□ -0.31
CXCL12-207ENST00000488591 DSCAMO60469 2012 aa13.1□□□□□ -0.31
CXCL12-207ENST00000488591 ROS1P08922 2347 aa13.1□□□□□ -0.31
CXCL12-207ENST00000488591 TCRBV3S1A0A5B6 114 aa13.1□□□□□ -0.31
CXCL12-207ENST00000488591 ATP6V1G2-DDX39BF2Z307 99 aa13.1□□□□□ -0.31
CXCL12-207ENST00000488591 EBAG9O00559 213 aa13.1□□□□□ -0.31
CXCL12-207ENST00000488591 IMPA2O14732 288 aa13.1□□□□□ -0.31
CXCL12-207ENST00000488591 GASTP01350 101 aa13.1□□□□□ -0.31
CXCL12-207ENST00000488591 APEHP13798 732 aaKnown RBP13.1□□□□□ -0.31
CXCL12-207ENST00000488591 GSTM3P21266 225 aa13.1□□□□□ -0.31
CXCL12-207ENST00000488591 PTDSS1P48651 473 aaKnown RBP13.1□□□□□ -0.31
CXCL12-207ENST00000488591 NAAAQ02083 359 aa13.1□□□□□ -0.31
CXCL12-207ENST00000488591 FMODQ06828 376 aa13.1□□□□□ -0.31
CXCL12-207ENST00000488591 PPP1R8Q12972 351 aaKnown RBP13.1□□□□□ -0.31
CXCL12-207ENST00000488591 KRR1Q13601 381 aaKnown RBP13.1□□□□□ -0.31
CXCL12-207ENST00000488591 SGCAQ16586 387 aa13.1□□□□□ -0.31
CXCL12-207ENST00000488591 C1orf146Q5VVC0 180 aa13.1□□□□□ -0.31
CXCL12-207ENST00000488591 TMEM53Q6P2H8 277 aa13.1□□□□□ -0.31
CXCL12-207ENST00000488591 SLC25A47Q6Q0C1 308 aa13.1□□□□□ -0.31
CXCL12-207ENST00000488591 THSD4Q6ZMP0 1018 aa13.1□□□□□ -0.31
CXCL12-207ENST00000488591 ADCK1Q86TW2 530 aa13.1□□□□□ -0.31
CXCL12-207ENST00000488591 OR4F15Q8NGB8 312 aa13.1□□□□□ -0.31
CXCL12-207ENST00000488591 OR9Q2Q8NGE9 314 aa13.1□□□□□ -0.31
CXCL12-207ENST00000488591 OR52L1Q8NGH7 329 aa13.1□□□□□ -0.31
CXCL12-207ENST00000488591 NMD3Q96D46 503 aaKnown RBP13.1□□□□□ -0.31
CXCL12-207ENST00000488591 ERMAPQ96PL5 475 aaPredicted RBP13.1□□□□□ -0.31
CXCL12-207ENST00000488591 DHRS9Q9BPW9 319 aa13.1□□□□□ -0.31
CXCL12-207ENST00000488591 SEC61A2Q9H9S3 476 aa13.1□□□□□ -0.31
CXCL12-207ENST00000488591 CADP27708 2225 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 MYO9AB2RTY4 2548 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 SLC22A23A1A5C7 686 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 PRSS37A4D1T9 235 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 ZNF503-AS2A6NEH8 195 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 VSTM5A8MXK1 200 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 E7EQL1 145 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 H7C1C5 153 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 SOCS2O14508 198 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 IDH3BO43837 385 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 FKBP6O75344 327 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 CIB2O75838 187 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 PPP1R3DO95685 299 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 TXNDC12O95881 172 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 NOS3P29474 1203 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 GIPRP48546 466 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 FABP6P51161 128 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 FXYD6P3P58550 94 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 LCN6P62502 163 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 CBX1P83916 185 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 MESTQ5EB52 335 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 AGAP6Q5VW22 663 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 ZNF770Q6IQ21 691 aaPredicted RBP13.09□□□□□ -0.31
CXCL12-207ENST00000488591 ZNF544Q6NX49 715 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 JAZF1Q86VZ6 243 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 FBXL14Q8N1E6 418 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 LRRC18Q8N456 261 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 CLDN22Q8N7P3 220 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms