RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 TSEN54Q7Z6J9 526 aaKnown RBP15.32■□□□□ 0.04
ITGB1-215ENST00000488494 OAFQ86UD1 273 aa15.32■□□□□ 0.04
ITGB1-215ENST00000488494 OR51A7Q8NH64 312 aa15.32■□□□□ 0.04
ITGB1-215ENST00000488494 DYNLRB1Q9NP97 96 aa15.32■□□□□ 0.04
ITGB1-215ENST00000488494 ARL2BPQ9Y2Y0 163 aa15.32■□□□□ 0.04
ITGB1-215ENST00000488494 SPEF1Q9Y4P9 236 aa15.32■□□□□ 0.04
ITGB1-215ENST00000488494 ARFGEF3Q5TH69 2177 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 VSTM5A8MXK1 200 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 SERPINA5P05154 406 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 TCN1P20061 433 aaPredicted RBP15.31■□□□□ 0.04
ITGB1-215ENST00000488494 CDAP32320 146 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 ZNF133P52736 654 aaPredicted RBP15.31■□□□□ 0.04
ITGB1-215ENST00000488494 RPL27P61353 136 aaKnown RBP15.31■□□□□ 0.04
ITGB1-215ENST00000488494 FHL1Q13642 323 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 TAF11Q15544 211 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 CARTPTQ16568 116 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 MSMPQ1L6U9 139 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 SLC36A2Q495M3 483 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 NRN1LQ496H8 165 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 FGD3Q5JSP0 725 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 GLYATQ6IB77 296 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 DPPA2Q7Z7J5 298 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 CLDN22Q8N7P3 220 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 LRRC75AQ8NAA5 344 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 SLC30A7Q8NEW0 376 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 NSMAFQ92636 917 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 NMD3Q96D46 503 aaKnown RBP15.31■□□□□ 0.04
ITGB1-215ENST00000488494 TSPAN32Q96QS1 320 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 KCNK17Q96T54 332 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 ANKRD19PQ9H560 264 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 RNF121Q9H920 327 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 NMNAT1Q9HAN9 279 aaPredicted RBP15.31■□□□□ 0.04
ITGB1-215ENST00000488494 SMURF2Q9HAU4 748 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 DCAF13Q9NV06 445 aaKnown RBP15.31■□□□□ 0.04
ITGB1-215ENST00000488494 ARL8BQ9NVJ2 186 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 NDUFAF4Q9P032 175 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 SAMD4AQ9UPU9 718 aaKnown RBP15.31■□□□□ 0.04
ITGB1-215ENST00000488494 CMAHPQ9Y471 501 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 UGT2A1Q9Y4X1 527 aa15.31■□□□□ 0.04
ITGB1-215ENST00000488494 IGKV1D-43A0A0B4J1Z2 117 aa15.3■□□□□ 0.04
ITGB1-215ENST00000488494 SH3PXD2BA1X283 911 aa15.3■□□□□ 0.04
ITGB1-215ENST00000488494 CDC42EP2O14613 210 aa15.3■□□□□ 0.04
ITGB1-215ENST00000488494 GMNNO75496 209 aa15.3■□□□□ 0.04
ITGB1-215ENST00000488494 H1F0P07305 194 aaKnown RBP15.3■□□□□ 0.04
ITGB1-215ENST00000488494 NR2C1P13056 603 aa15.3■□□□□ 0.04
ITGB1-215ENST00000488494 SLC9A3P48764 834 aa15.3■□□□□ 0.04
ITGB1-215ENST00000488494 PDLIM4P50479 330 aa15.3■□□□□ 0.04
ITGB1-215ENST00000488494 CTXN1P60606 82 aa15.3■□□□□ 0.04
ITGB1-215ENST00000488494 RPS23P62266 143 aaKnown RBP15.3■□□□□ 0.04
ITGB1-215ENST00000488494 FXNQ16595 210 aa15.3■□□□□ 0.04
ITGB1-215ENST00000488494 FAM205BPQ63HN1 556 aa15.3■□□□□ 0.04
ITGB1-215ENST00000488494 RNF113BQ8IZP6 322 aaKnown RBP15.3■□□□□ 0.04
ITGB1-215ENST00000488494 PGAM4Q8N0Y7 254 aa15.3■□□□□ 0.04
ITGB1-215ENST00000488494 LRRC18Q8N456 261 aa15.3■□□□□ 0.04
ITGB1-215ENST00000488494 ZNF519Q8TB69 540 aa15.3■□□□□ 0.04
ITGB1-215ENST00000488494 SLC7A13Q8TCU3 470 aa15.3■□□□□ 0.04
ITGB1-215ENST00000488494 MRPL24Q96A35 216 aaKnown RBP15.3■□□□□ 0.04
ITGB1-215ENST00000488494 LRRC37BQ96QE4 947 aa15.3■□□□□ 0.04
ITGB1-215ENST00000488494 DOK1Q99704 481 aa15.3■□□□□ 0.04
ITGB1-215ENST00000488494 ALG12Q9BV10 488 aa15.3■□□□□ 0.04
ITGB1-215ENST00000488494 MRPL37Q9BZE1 423 aaKnown RBP15.3■□□□□ 0.04
ITGB1-215ENST00000488494 SLC7A8Q9UHI5 535 aa15.3■□□□□ 0.04
ITGB1-215ENST00000488494 TAGLN3Q9UI15 199 aa15.3■□□□□ 0.04
ITGB1-215ENST00000488494 MAGEL2Q9UJ55 1249 aa15.3■□□□□ 0.04
ITGB1-215ENST00000488494 FBXO9Q9UK97 447 aaPredicted RBP15.3■□□□□ 0.04
ITGB1-215ENST00000488494 FZR1Q9UM11 496 aa15.3■□□□□ 0.04
ITGB1-215ENST00000488494 FAM32AQ9Y421 112 aaKnown RBP15.3■□□□□ 0.04
ITGB1-215ENST00000488494 A0A1W2PRQ8 180 aa15.29■□□□□ 0.04
ITGB1-215ENST00000488494 TMEM129A0AVI4 362 aa15.29■□□□□ 0.04
ITGB1-215ENST00000488494 H7C1C5 153 aa15.29■□□□□ 0.04
ITGB1-215ENST00000488494 CD5LO43866 347 aa15.29■□□□□ 0.04
ITGB1-215ENST00000488494 DCTN3O75935 186 aa15.29■□□□□ 0.04
ITGB1-215ENST00000488494 DIRAS1O95057 198 aa15.29■□□□□ 0.04
ITGB1-215ENST00000488494 ERCC1P07992 297 aaPredicted RBP15.29■□□□□ 0.04
ITGB1-215ENST00000488494 CCL2P13500 99 aa15.29■□□□□ 0.04
ITGB1-215ENST00000488494 LCN6P62502 163 aa15.29■□□□□ 0.04
ITGB1-215ENST00000488494 MRPS34P82930 218 aaKnown RBP15.29■□□□□ 0.04
ITGB1-215ENST00000488494 VLDLRP98155 873 aa15.29■□□□□ 0.04
ITGB1-215ENST00000488494 LOXL1Q08397 574 aaPredicted RBP15.29■□□□□ 0.04
ITGB1-215ENST00000488494 DGCR6Q14129 220 aa15.29■□□□□ 0.04
ITGB1-215ENST00000488494 TMEM249Q2WGJ8 235 aa15.29■□□□□ 0.04
ITGB1-215ENST00000488494 PODNL1Q6PEZ8 512 aa15.29■□□□□ 0.04
ITGB1-215ENST00000488494 PIGWQ7Z7B1 504 aa15.29■□□□□ 0.04
ITGB1-215ENST00000488494 ZCCHC24Q8N2G6 241 aaKnown RBP15.29■□□□□ 0.04
ITGB1-215ENST00000488494 PAQR4Q8N4S7 273 aaPredicted RBP15.29■□□□□ 0.04
ITGB1-215ENST00000488494 NABP1Q96AH0 204 aa15.29■□□□□ 0.04
ITGB1-215ENST00000488494 FAM46AQ96IP4 442 aaKnown RBP15.29■□□□□ 0.04
ITGB1-215ENST00000488494 TNFRSF13CQ96RJ3 184 aa15.29■□□□□ 0.04
ITGB1-215ENST00000488494 SYT3Q9BQG1 590 aa15.29■□□□□ 0.04
ITGB1-215ENST00000488494 PIMREGQ9BSJ6 248 aa15.29■□□□□ 0.04
ITGB1-215ENST00000488494 RAB1BQ9H0U4 201 aa15.29■□□□□ 0.04
ITGB1-215ENST00000488494 CDH20Q9HBT6 801 aa15.29■□□□□ 0.04
ITGB1-215ENST00000488494 ZNF346Q9UL40 294 aaKnown RBP15.29■□□□□ 0.04
ITGB1-215ENST00000488494 TMEM5Q9Y2B1 443 aa15.29■□□□□ 0.04
ITGB1-215ENST00000488494 ADAM18Q9Y3Q7 739 aa15.29■□□□□ 0.04
ITGB1-215ENST00000488494 A6NIZ1 184 aa15.28■□□□□ 0.04
ITGB1-215ENST00000488494 IGFBP1P08833 259 aaPredicted RBP15.28■□□□□ 0.04
ITGB1-215ENST00000488494 ADRA2AP08913 450 aa15.28■□□□□ 0.04
ITGB1-215ENST00000488494 MMP7P09237 267 aaPredicted RBP15.28■□□□□ 0.04
ITGB1-215ENST00000488494 HSD17B1P14061 328 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms