RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 ZAR1Q86SH2 424 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 CDH26Q8IXH8 852 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 C9orf40Q8IXQ3 194 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 ACBD7Q8N6N7 88 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 OR2Y1Q8NGV0 311 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 ABHD4Q8TB40 342 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 FANK1Q8TC84 345 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 OSTF1Q92882 214 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 LRRC46Q96FV0 321 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 SLC46A1Q96NT5 459 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 FANCFQ9NPI8 374 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 CTPS2Q9NRF8 586 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 COPS7AQ9UBW8 275 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 PRODH2Q9UF12 536 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 NDRG3Q9UGV2 375 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 WDR45Q9Y484 360 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 CEP250Q9BV73 2442 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 FREM2Q5SZK8 3169 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 A0A0G2JPF8 293 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 HNRNPCL3B7ZW38 293 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 PRSS44E7EML9 344 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 HNRNPCL4P0DMR1 293 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 SNRPBP14678 240 aaKnown RBP12.41□□□□□ -0.42
COPS7B-221ENST00000488111 RAB3BP20337 219 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 FOLR3P41439 243 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 GPR143P51810 404 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 RSPO4Q2I0M5 234 aaPredicted RBP12.41□□□□□ -0.42
COPS7B-221ENST00000488111 TMEM255AQ5JRV8 349 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 ARL9Q6T311 187 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 FRRS1Q6ZNA5 592 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 PRSS45Q7RTY3 260 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 NFAM1Q8NET5 270 aaPredicted RBP12.41□□□□□ -0.42
COPS7B-221ENST00000488111 OR51G2Q8NGK0 314 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 BBS10Q8TAM1 723 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 THAP3Q8WTV1 239 aaPredicted RBP12.41□□□□□ -0.42
COPS7B-221ENST00000488111 HOXB13Q92826 284 aaPredicted RBP12.41□□□□□ -0.42
COPS7B-221ENST00000488111 FAM46AQ96IP4 442 aaKnown RBP12.41□□□□□ -0.42
COPS7B-221ENST00000488111 ART5Q96L15 291 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 LPAR4Q99677 370 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 UTP23Q9BRU9 249 aaKnown RBP12.41□□□□□ -0.42
COPS7B-221ENST00000488111 TEX12Q9BXU0 123 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 NXF5Q9H1B4 397 aaKnown RBP12.41□□□□□ -0.42
COPS7B-221ENST00000488111 ANKRD19PQ9H560 264 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 BCL2L10Q9HD36 194 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 HINT3Q9NQE9 182 aaKnown RBP12.41□□□□□ -0.42
COPS7B-221ENST00000488111 CLEC4AQ9UMR7 237 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 OR10H1Q9Y4A9 318 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 CENPVL1A0A0U1RR11 272 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 PRR23D1E9PI22 279 aaPredicted RBP12.41□□□□□ -0.42
COPS7B-221ENST00000488111 F8W036 122 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 MASP2O00187 686 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 ARPC1BO15143 372 aaKnown RBP12.41□□□□□ -0.42
COPS7B-221ENST00000488111 AQP8O94778 261 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 IGKV1D-16P01601 117 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 IL5P05113 134 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 PRR23D2P0DMB1 279 aaPredicted RBP12.41□□□□□ -0.42
COPS7B-221ENST00000488111 ATF1P18846 271 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 STAT5AP42229 794 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 MAPK14Q16539 360 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 ZNF626Q68DY1 528 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 GSG1LQ6UXU4 331 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 C16orf47Q6ZP98 133 aaPredicted RBP12.41□□□□□ -0.42
COPS7B-221ENST00000488111 VRK2Q86Y07 508 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 ZSCAN1Q8NBB4 408 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 APCDD1LQ8NCL9 501 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 C7orf57Q8NEG2 295 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 WDR89Q96FK6 387 aaPredicted RBP12.41□□□□□ -0.42
COPS7B-221ENST00000488111 Q9N2J8 555 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 TAS2R5Q9NYW4 299 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 ZNF223Q9UK11 482 aaPredicted RBP12.41□□□□□ -0.42
COPS7B-221ENST00000488111 TCFL5Q9UL49 500 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 FARSAQ9Y285 508 aaKnown RBP12.41□□□□□ -0.42
COPS7B-221ENST00000488111 GPR55Q9Y2T6 319 aaPredicted RBP12.41□□□□□ -0.42
COPS7B-221ENST00000488111 SLC6A5Q9Y345 797 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 PCDHGA9Q9Y5G4 932 aaKnown RBP12.41□□□□□ -0.42
COPS7B-221ENST00000488111 NINQ8N4C6 2090 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 SDK2Q58EX2 2172 aa12.41□□□□□ -0.42
COPS7B-221ENST00000488111 SNRPGP15A8MWD9 76 aa12.4□□□□□ -0.42
COPS7B-221ENST00000488111 RAD1O60671 282 aa12.4□□□□□ -0.42
COPS7B-221ENST00000488111 SLC2A10O95528 541 aa12.4□□□□□ -0.42
COPS7B-221ENST00000488111 ZNF660Q6AZW8 331 aaPredicted RBP12.4□□□□□ -0.42
COPS7B-221ENST00000488111 MTFR2Q6P444 385 aa12.4□□□□□ -0.42
COPS7B-221ENST00000488111 ESPNLQ6ZVH7 1005 aa12.4□□□□□ -0.42
COPS7B-221ENST00000488111 CXXC5Q7LFL8 322 aaKnown RBP12.4□□□□□ -0.42
COPS7B-221ENST00000488111 PRR22Q8IZ63 422 aa12.4□□□□□ -0.42
COPS7B-221ENST00000488111 TMEM99Q8N816 258 aa12.4□□□□□ -0.42
COPS7B-221ENST00000488111 KLHL1Q9NR64 748 aa12.4□□□□□ -0.42
COPS7B-221ENST00000488111 MED11Q9P086 117 aa12.4□□□□□ -0.42
COPS7B-221ENST00000488111 H2AFY2Q9P0M6 372 aaPredicted RBP12.4□□□□□ -0.42
COPS7B-221ENST00000488111 C19orf25Q9UFG5 118 aaPredicted RBP12.4□□□□□ -0.42
COPS7B-221ENST00000488111 RCE1Q9Y256 329 aa12.4□□□□□ -0.42
COPS7B-221ENST00000488111 HS3ST3B1Q9Y662 390 aa12.4□□□□□ -0.42
COPS7B-221ENST00000488111 CELSR3Q9NYQ7 3312 aa12.4□□□□□ -0.42
COPS7B-221ENST00000488111 A0A0B4J203 849 aa12.4□□□□□ -0.43
COPS7B-221ENST00000488111 PQLC2LA1A4F0 135 aa12.4□□□□□ -0.43
COPS7B-221ENST00000488111 E9PI62 339 aa12.4□□□□□ -0.43
COPS7B-221ENST00000488111 PEX12O00623 359 aa12.4□□□□□ -0.43
COPS7B-221ENST00000488111 STX11O75558 287 aa12.4□□□□□ -0.43
COPS7B-221ENST00000488111 KDM4BO94953 1096 aa12.4□□□□□ -0.43
COPS7B-221ENST00000488111 ECDO95905 644 aaPredicted RBP12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms