RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 FGF1P05230 155 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 ZDHHC11BP0C7U3 371 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 SMIM10L1P0DMW3 83 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 PSMC3P17980 439 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 PGAM1P18669 254 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 OMGP23515 440 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 NPY1RP25929 384 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 GDI1P31150 447 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 PRPHP41219 470 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 RFX3P48380 749 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 CCR8P51685 355 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 SLC7A9P82251 487 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 MRPL28Q13084 256 aaKnown RBP1.2□□□□□ -2.22
SMC4-220ENST00000488017 GK3PQ14409 553 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 PON3Q15166 354 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 STK11Q15831 433 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 KRTAP13-4Q3LI77 160 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 COX19Q49B96 90 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 LRRC23Q53EV4 343 aaPredicted RBP1.2□□□□□ -2.22
SMC4-220ENST00000488017 COA6Q5JTJ3 125 aaKnown RBP1.2□□□□□ -2.22
SMC4-220ENST00000488017 DNAJC24Q6P3W2 148 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 RGS9BPQ6ZS82 235 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 STRADAQ7RTN6 431 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 ASCL5Q7RTU5 278 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 EFL1Q7Z2Z2 1120 aaKnown RBP1.2□□□□□ -2.22
SMC4-220ENST00000488017 PSTKQ8IV42 348 aaKnown RBP1.2□□□□□ -2.22
SMC4-220ENST00000488017 PGAM4Q8N0Y7 254 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 LRRC75A-AS1Q8N1F1 130 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 STPG2Q8N412 459 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 MREGQ8N565 214 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 EIF1ADQ8N9N8 165 aaKnown RBP1.2□□□□□ -2.22
SMC4-220ENST00000488017 BHLHE23Q8NDY6 225 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 FAM83FQ8NEG4 500 aaPredicted RBP1.2□□□□□ -2.22
SMC4-220ENST00000488017 TRPV1Q8NER1 839 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 OR5W2Q8NH69 310 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 TMEM54Q969K7 222 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 RMI2Q96E14 147 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 SMIM10Q96HG1 83 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 WFIKKN1Q96NZ8 548 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 TSSK3Q96PN8 268 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 CRACR2AQ9BSW2 395 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 ULBP2Q9BZM5 246 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 ROPN1BQ9BZX4 212 aaPredicted RBP1.2□□□□□ -2.22
SMC4-220ENST00000488017 MFFQ9GZY8 342 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 FN3KRPQ9HA64 309 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 NOX3Q9HBY0 568 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 ZNF222Q9UK12 451 aa1.2□□□□□ -2.22
SMC4-220ENST00000488017 MRPS18BQ9Y676 258 aaKnown RBP1.2□□□□□ -2.22
SMC4-220ENST00000488017 IGSF9BQ9UPX0 1349 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 NUP214P35658 2090 aaPredicted RBP1.19□□□□□ -2.22
SMC4-220ENST00000488017 A0A1B0GVX0 72 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 A0A1W2PP18 115 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 C7orf66A4D0T2 115 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 ARHGEF35A5YM69 484 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 ZNF705GA8MUZ8 300 aaPredicted RBP1.19□□□□□ -2.22
SMC4-220ENST00000488017 INS-IGF2F8WCM5 200 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 PPP1R2P9O14990 202 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 UTS2O95399 124 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 GNAO1P09471 354 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 CT62P0C5K7 136 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 FOLR1P15328 257 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 AK4P27144 223 aaPredicted RBP1.19□□□□□ -2.22
SMC4-220ENST00000488017 HSD17B2P37059 387 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 VHLP40337 213 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 GYG1P46976 350 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 CEBPDP49716 269 aaPredicted RBP1.19□□□□□ -2.22
SMC4-220ENST00000488017 TPMTP51580 245 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 FBXW4P57775 412 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 ZSCAN26Q16670 478 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 PHYHD1Q5SRE7 291 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 DNLZQ5SXM8 178 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 CENPPQ6IPU0 288 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 CASC1Q6TDU7 716 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 LRRC74BQ6ZQY2 392 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 ZNF493Q6ZR52 646 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 SHISA6Q6ZSJ9 500 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 FAM92BQ6ZTR7 304 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 H2AFVQ71UI9 128 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 TBC1D21Q8IYX1 336 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 CEP112Q8N8E3 955 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 C15orf56Q8N910 161 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 OR4F6Q8NGB9 312 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 OR2A5Q96R48 311 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 TCHPQ9BT92 498 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 CHAC1Q9BUX1 264 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 OSBPL10Q9BXB5 764 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 RPF2Q9H7B2 306 aaKnown RBP1.19□□□□□ -2.22
SMC4-220ENST00000488017 SGK2Q9HBY8 427 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 CD84Q9UIB8 345 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 PSG8Q9UQ74 426 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 N6AMT1Q9Y5N5 214 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 NPTNQ9Y639 398 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 BRWD3Q6RI45 1802 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 MYO15BQ96JP2 1530 aa1.19□□□□□ -2.22
SMC4-220ENST00000488017 ATAD2BQ9ULI0 1458 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 CENPJQ9HC77 1338 aaPredicted RBP1.18□□□□□ -2.22
SMC4-220ENST00000488017 IGHV5-51A0A0C4DH38 117 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 A0A1W2PPE3 182 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 ZNF233A6NK53 670 aa1.18□□□□□ -2.22
SMC4-220ENST00000488017 OR52A4PA6NMU1 304 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms