RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 BLVRAP53004 296 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 RHBDD2Q6NTF9 364 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 TMEM71Q6P5X7 295 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 GLDNQ6ZMI3 551 aaPredicted RBP23.56■■□□□ 1.36
HLA-C-208ENST00000487245 NLRC3Q7RTR2 1065 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 GRINAQ7Z429 371 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 OR6N2Q8NGY6 317 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 GPR119Q8TDV5 335 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 DCBLD2Q96PD2 775 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 SLC7A5P2Q9GIP4 190 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 KLK11Q9UBX7 282 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 IKZF2Q9UKS7 526 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 SPTBN5Q9NRC6 3674 aaKnown RBP23.56■■□□□ 1.36
HLA-C-208ENST00000487245 LEUTXA8MZ59 168 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 G3V3Q6 166 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 SUSD5O60279 629 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 NPIPB7O75200 414 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 PNLIPP16233 465 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 ZNF227Q86WZ6 799 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 C17orf50Q8WW18 174 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 METTL21AQ8WXB1 218 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 GCDHQ92947 438 aaPredicted RBP23.56■■□□□ 1.36
HLA-C-208ENST00000487245 MCHR2Q969V1 340 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 C4orf45Q96LM5 186 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 CITED4Q96RK1 184 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 NKIRAS2Q9NYR9 191 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 STEAP1Q9UHE8 339 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 FLVCR2Q9UPI3 526 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 TTLL8A6PVC2 850 aa23.55■■□□□ 1.36
HLA-C-208ENST00000487245 SNAPC5O75971 98 aa23.55■■□□□ 1.36
HLA-C-208ENST00000487245 SOX2P48431 317 aa23.55■■□□□ 1.36
HLA-C-208ENST00000487245 VEGFCP49767 419 aa23.55■■□□□ 1.36
HLA-C-208ENST00000487245 ACY1Q03154 408 aa23.55■■□□□ 1.36
HLA-C-208ENST00000487245 COX15Q7KZN9 410 aa23.55■■□□□ 1.36
HLA-C-208ENST00000487245 ZNF676Q8N7Q3 588 aa23.55■■□□□ 1.36
HLA-C-208ENST00000487245 OTOSQ8NHW6 89 aa23.55■■□□□ 1.36
HLA-C-208ENST00000487245 ELF4Q99607 663 aaPredicted RBP23.55■■□□□ 1.36
HLA-C-208ENST00000487245 NUDT22Q9BRQ3 303 aa23.55■■□□□ 1.36
HLA-C-208ENST00000487245 PTDSS2Q9BVG9 487 aa23.55■■□□□ 1.36
HLA-C-208ENST00000487245 NOX3Q9HBY0 568 aa23.55■■□□□ 1.36
HLA-C-208ENST00000487245 ANXA2P2A6NMY6 339 aa23.54■■□□□ 1.36
HLA-C-208ENST00000487245 H7C1C5 153 aa23.54■■□□□ 1.36
HLA-C-208ENST00000487245 XRCC3O43542 346 aa23.54■■□□□ 1.36
HLA-C-208ENST00000487245 GMFGO60234 142 aa23.54■■□□□ 1.36
HLA-C-208ENST00000487245 DXOO77932 396 aaKnown RBP23.54■■□□□ 1.36
HLA-C-208ENST00000487245 ANXA2P07355 339 aaKnown RBP23.54■■□□□ 1.36
HLA-C-208ENST00000487245 RPL27P61353 136 aaKnown RBP23.54■■□□□ 1.36
HLA-C-208ENST00000487245 LCN6P62502 163 aa23.54■■□□□ 1.36
HLA-C-208ENST00000487245 RPS15P62841 145 aaKnown RBP23.54■■□□□ 1.36
HLA-C-208ENST00000487245 DHODHQ02127 395 aa23.54■■□□□ 1.36
HLA-C-208ENST00000487245 SQSTM1Q13501 440 aa23.54■■□□□ 1.36
HLA-C-208ENST00000487245 POMZP3Q6PJE2 187 aa23.54■■□□□ 1.36
HLA-C-208ENST00000487245 Q6ZTK2 550 aa23.54■■□□□ 1.36
HLA-C-208ENST00000487245 DPY19L4Q7Z388 723 aa23.54■■□□□ 1.36
HLA-C-208ENST00000487245 TMPRSS12Q86WS5 348 aa23.54■■□□□ 1.36
HLA-C-208ENST00000487245 PRSS35Q8N3Z0 413 aa23.54■■□□□ 1.36
HLA-C-208ENST00000487245 ASB17Q8WXJ9 295 aa23.54■■□□□ 1.36
HLA-C-208ENST00000487245 OR10A4Q9H209 315 aa23.54■■□□□ 1.36
HLA-C-208ENST00000487245 PRO3102Q9H379 93 aa23.54■■□□□ 1.36
HLA-C-208ENST00000487245 CTSFQ9UBX1 484 aa23.54■■□□□ 1.36
HLA-C-208ENST00000487245 IGLV3-12A0A075B6K2 115 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 SNRPGP15A8MWD9 76 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 K7ESF4 209 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 ARPC1BO15143 372 aaKnown RBP23.53■■□□□ 1.36
HLA-C-208ENST00000487245 OR2T1O43869 369 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 ICMTO60725 284 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 NDUFB6O95139 128 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 IFNGR1P15260 489 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 RGS19P49795 217 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 SELENOPP49908 381 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 SLC26A5P58743 744 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 RNF4P78317 190 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 C1orf140Q5VVS0 124 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 LANCL3Q6ZV70 420 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 ADGRG3Q86Y34 549 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 OR6S1Q8NH40 331 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 TMEM234Q8WY98 164 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 OR8B4Q96RC9 309 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 SEMA4CQ9C0C4 833 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 SYT4Q9H2B2 425 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 TRAV8-7A0A075B6U6 113 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 OR6A2O95222 327 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 MYF5P13349 255 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 KIR3DL2P43630 455 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 C1QL3Q5VWW1 255 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 CHRDL2Q6WN34 429 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 PM20D2Q8IYS1 436 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 STT3BQ8TCJ2 826 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 SLC25A36Q96CQ1 311 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 TXNIPQ9H3M7 391 aa23.53■■□□□ 1.36
HLA-C-208ENST00000487245 C11orf98E9PRG8 122 aa23.52■■□□□ 1.36
HLA-C-208ENST00000487245 IGHMP01871 453 aa23.52■■□□□ 1.36
HLA-C-208ENST00000487245 SHBQ15464 509 aa23.52■■□□□ 1.36
HLA-C-208ENST00000487245 OR2T35Q8NGX2 323 aa23.52■■□□□ 1.36
HLA-C-208ENST00000487245 ZNF519Q8TB69 540 aa23.52■■□□□ 1.36
HLA-C-208ENST00000487245 DUSP23Q9BVJ7 150 aa23.52■■□□□ 1.36
HLA-C-208ENST00000487245 METTL17Q9H7H0 456 aaPredicted RBP23.52■■□□□ 1.36
HLA-C-208ENST00000487245 BEX1Q9HBH7 125 aa23.52■■□□□ 1.36
HLA-C-208ENST00000487245 GPN1Q9HCN4 374 aaPredicted RBP23.52■■□□□ 1.36
HLA-C-208ENST00000487245 SLC22A11Q9NSA0 550 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms