RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 ASB17Q8WXJ9 295 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 PNPLA2Q96AD5 504 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 SLC25A44Q96H78 314 aaPredicted RBP6.3□□□□□ -1.4
SF3A3-206ENST00000487062 CENPOQ9BU64 300 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 SF3B5Q9BWJ5 86 aaKnown RBP6.3□□□□□ -1.4
SF3A3-206ENST00000487062 KCNN2Q9H2S1 579 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 ZNF552Q9H707 407 aaPredicted RBP6.3□□□□□ -1.4
SF3A3-206ENST00000487062 WDR76Q9H967 626 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 ISG20L2Q9H9L3 353 aaKnown RBP6.3□□□□□ -1.4
SF3A3-206ENST00000487062 MED29Q9NX70 200 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 CCDC59Q9P031 241 aaKnown RBP6.3□□□□□ -1.4
SF3A3-206ENST00000487062 B3GAT1Q9P2W7 334 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 MED13Q9UHV7 2174 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 EP300Q09472 2414 aaPredicted RBP6.29□□□□□ -1.4
SF3A3-206ENST00000487062 IGLV1-36A0A0B4J1U3 117 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 SLC35F4A4IF30 521 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 PINLYPA6NC86 204 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 METTL15A6NJ78 407 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 TNFSF11O14788 317 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 SMAD7O15105 426 aaKnown RBP6.29□□□□□ -1.4
SF3A3-206ENST00000487062 PLPP2O43688 288 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 TRAF3IP2O43734 574 aaPredicted RBP6.29□□□□□ -1.4
SF3A3-206ENST00000487062 GPRIN2O60269 458 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 TMCC2O75069 709 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 SULT1C4O75897 302 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 RGS9O75916 674 aaPredicted RBP6.29□□□□□ -1.4
SF3A3-206ENST00000487062 LALBAP00709 142 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 SERPINA3P01011 423 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 CD1AP06126 327 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 GAAP10253 952 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 CTLA4P16410 223 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 EDNRAP25101 427 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 FGF9P31371 208 aaPredicted RBP6.29□□□□□ -1.4
SF3A3-206ENST00000487062 GUCA1AP43080 201 aaPredicted RBP6.29□□□□□ -1.4
SF3A3-206ENST00000487062 CD97P48960 835 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 ENTPD1P49961 510 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 HCCSP53701 268 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 GFRA1P56159 465 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 CARD18P57730 90 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 RPS25P62851 125 aaKnown RBP6.29□□□□□ -1.4
SF3A3-206ENST00000487062 SIRPAP78324 504 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 ADAM8P78325 824 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 ROR2Q01974 943 aaKnown RBP6.29□□□□□ -1.4
SF3A3-206ENST00000487062 EGR3Q06889 387 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 C19orf57Q0VDD7 668 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 DOC2BQ14184 412 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 SLC10A1Q14973 349 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 MOGQ16653 247 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 HYAL4Q2M3T9 481 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 DEFB109BQ30KR1 87 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 ZNF404Q494X3 552 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 TP53I3Q53FA7 332 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 ZNF766Q5HY98 468 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 VASNQ6EMK4 673 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 SLC18B1Q6NT16 456 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 ZNF544Q6NX49 715 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 RPL22L1Q6P5R6 122 aaKnown RBP6.29□□□□□ -1.4
SF3A3-206ENST00000487062 KCTD18Q6PI47 426 aaPredicted RBP6.29□□□□□ -1.4
SF3A3-206ENST00000487062 CD200R1LQ6Q8B3 271 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 ARL9Q6T311 187 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 PAMR1Q6UXH9 720 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 SSX6Q7RTT6 188 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 DPY19L4Q7Z388 723 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 GLB1L2Q8IW92 636 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 MS4A15Q8N5U1 240 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 MEIOBQ8N635 442 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 FAM169BQ8N8A8 192 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 YIPF7Q8N8F6 280 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 ZFP41Q8N8Y5 198 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 SYT14Q8NB59 555 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 NOXO1Q8NFA2 376 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 OR2V1Q8NHB1 315 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 OTOSQ8NHW6 89 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 MCFD2Q8NI22 146 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 THEM6Q8WUY1 208 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 TMEM203Q969S6 136 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 CPNE4Q96A23 557 aaPredicted RBP6.29□□□□□ -1.4
SF3A3-206ENST00000487062 INTS12Q96CB8 462 aaKnown RBP6.29□□□□□ -1.4
SF3A3-206ENST00000487062 ANAPC16Q96DE5 110 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 SCMH1Q96GD3 660 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 TXNDC15Q96J42 360 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 KCTD7Q96MP8 289 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 TTYH2Q9BSA4 534 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 EMC6Q9BV81 110 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 TMED9Q9BVK6 235 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 HES7Q9BYE0 225 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 TTTY12Q9BZ98 90 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 MMP27Q9H306 513 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 ZNF703Q9H7S9 590 aaPredicted RBP6.29□□□□□ -1.4
SF3A3-206ENST00000487062 ZFAND3Q9H8U3 227 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 TXNL4BQ9NX01 149 aaKnown RBP6.29□□□□□ -1.4
SF3A3-206ENST00000487062 KLHL9Q9P2J3 617 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 KLHL13Q9P2N7 655 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 GNG8Q9UK08 70 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 IKZF2Q9UKS7 526 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 COPS3Q9UNS2 423 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 COA3Q9Y2R0 106 aaPredicted RBP6.29□□□□□ -1.4
SF3A3-206ENST00000487062 SF3B6Q9Y3B4 125 aaKnown RBP6.29□□□□□ -1.4
SF3A3-206ENST00000487062 A3GALT2U3KPV4 340 aa6.29□□□□□ -1.4
SF3A3-206ENST00000487062 ZNF292O60281 2723 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms