RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 GPRC6AQ5T6X5 926 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 N4BP2L1Q5TBK1 243 aaPredicted RBP3.28□□□□□ -1.88
PTCD3-216ENST00000487043 HHATQ5VTY9 493 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 FAM219BQ5XKK7 198 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 TTC19Q6DKK2 380 aaPredicted RBP3.28□□□□□ -1.88
PTCD3-216ENST00000487043 PTRHD1Q6GMV3 140 aaKnown RBP3.28□□□□□ -1.88
PTCD3-216ENST00000487043 Q6ZS52 159 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 LANCL3Q6ZV70 420 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 LRRC70Q7Z2Q7 622 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 HORMAD1Q86X24 394 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 ZNF679Q8IYX0 411 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 ZCCHC7Q8N3Z6 543 aaKnown RBP3.28□□□□□ -1.88
PTCD3-216ENST00000487043 SPEM1Q8N4L4 309 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 CLDN19Q8N6F1 224 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 STEAP2Q8NFT2 490 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 RHEBL1Q8TAI7 183 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 CD200R1Q8TD46 325 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 KCTD4Q8WVF5 259 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 ANKRD49Q8WVL7 239 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 SPRYD4Q8WW59 207 aaPredicted RBP3.28□□□□□ -1.88
PTCD3-216ENST00000487043 RLN3Q8WXF3 142 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 DNASE2BQ8WZ79 361 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 CLDN23Q96B33 292 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 NUS1Q96E22 293 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 MOCOSQ96EN8 888 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 DNAJA3Q96EY1 480 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 DCUN1D1Q96GG9 259 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 COX14Q96I36 57 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 ZNF514Q96K75 400 aaPredicted RBP3.28□□□□□ -1.88
PTCD3-216ENST00000487043 MAGEB18Q96M61 343 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 TSNARE1Q96NA8 513 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 GPR21Q99679 349 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 CCT7Q99832 543 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 PAIP2Q9BPZ3 127 aaKnown RBP3.28□□□□□ -1.88
PTCD3-216ENST00000487043 MRPL57Q9BQC6 102 aaKnown RBP3.28□□□□□ -1.88
PTCD3-216ENST00000487043 EDEM2Q9BV94 578 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 SLC17A9Q9BYT1 436 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 IQCGQ9H095 443 aaKnown RBP3.28□□□□□ -1.88
PTCD3-216ENST00000487043 ELOVL3Q9HB03 270 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 NMRAL1Q9HBL8 299 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 SGK2Q9HBY8 427 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 TAS2R13Q9NYV9 303 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 GALPQ9UBC7 116 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 GNPTGQ9UJJ9 305 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 CLEC4AQ9UMR7 237 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 RNF6Q9Y252 685 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 PRSS21Q9Y6M0 314 aa3.28□□□□□ -1.88
PTCD3-216ENST00000487043 LRRK1Q38SD2 2015 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 PLXNB3Q9ULL4 1909 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 PLXNA2O75051 1894 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 IGLV4-3A0A075B6K6 122 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 IQCF5A8MTL0 148 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 E5RI56 91 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 C11orf98E9PRG8 122 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 NTN3O00634 580 aaPredicted RBP3.27□□□□□ -1.89
PTCD3-216ENST00000487043 PPIHO43447 177 aaKnown RBP3.27□□□□□ -1.89
PTCD3-216ENST00000487043 LATO43561 262 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 STX11O75558 287 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 CDK14O94921 469 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 TSPAN12O95859 305 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 FTH1P02794 183 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 HOXC4P09017 264 aaPredicted RBP3.27□□□□□ -1.89
PTCD3-216ENST00000487043 TAC1P20366 129 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 ALDH3A1P30838 453 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 CCR7P32248 378 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 CAPGP40121 348 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 CXCL12P48061 93 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 POU3F4P49335 361 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 DHPSP49366 369 aaPredicted RBP3.27□□□□□ -1.89
PTCD3-216ENST00000487043 PRLHRP49683 370 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 KPNA2P52292 529 aaKnown RBP3.27□□□□□ -1.89
PTCD3-216ENST00000487043 MFAP2P55001 183 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 TTLL9Q3SXZ7 439 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 ACSBG2Q5FVE4 666 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 TTC23Q5W5X9 447 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 SEL1L3Q68CR1 1132 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 PYHIN1Q6K0P9 492 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 TMEM220Q6QAJ8 160 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 CYHR1Q6ZMK1 362 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 PARGQ86W56 976 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 TRIM69Q86WT6 500 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 RNF130Q86XS8 419 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 NUDCD3Q8IVD9 361 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 C10orf67Q8IYJ2 551 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 ZNF491Q8N8L2 437 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 SUMF1Q8NBK3 374 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 TSTD1Q8NFU3 115 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 NANPQ8TBE9 248 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 RAB3IL1Q8TBN0 382 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 STAG3L4Q8TBR4 150 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 EEF1AKMT1Q8WVE0 214 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 DYDC1Q8WWB3 177 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 ASZ1Q8WWH4 475 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 GTF3AQ92664 365 aaKnown RBP3.27□□□□□ -1.89
PTCD3-216ENST00000487043 ZNF75CPQ92670 426 aaPredicted RBP3.27□□□□□ -1.89
PTCD3-216ENST00000487043 RPL3LQ92901 407 aaKnown RBP3.27□□□□□ -1.89
PTCD3-216ENST00000487043 CCDC126Q96EE4 140 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 CHMP6Q96FZ7 201 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 ZNF317Q96PQ6 595 aaPredicted RBP3.27□□□□□ -1.89
PTCD3-216ENST00000487043 CCT8L2Q96SF2 557 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms