RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 TMEM246Q9BRR3 403 aa12.56□□□□□ -0.4
U2AF1-211ENST00000486519 RNF121Q9H920 327 aa12.56□□□□□ -0.4
U2AF1-211ENST00000486519 FBLN5Q9UBX5 448 aa12.56□□□□□ -0.4
U2AF1-211ENST00000486519 TMED5Q9Y3A6 229 aa12.56□□□□□ -0.4
U2AF1-211ENST00000486519 DNAJC15Q9Y5T4 150 aa12.56□□□□□ -0.4
U2AF1-211ENST00000486519 STARD9Q9P2P6 4700 aa12.56□□□□□ -0.4
U2AF1-211ENST00000486519 HUWE1Q7Z6Z7 4374 aaKnown RBP12.55□□□□□ -0.4
U2AF1-211ENST00000486519 CDHR4A6H8M9 788 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 AIM2O14862 343 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 AKAP8O43823 692 aaKnown RBP12.55□□□□□ -0.4
U2AF1-211ENST00000486519 CYB5R3P00387 301 aaPredicted RBP12.55□□□□□ -0.4
U2AF1-211ENST00000486519 CCNOP22674 350 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 UQCRC2P22695 453 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 SLC6A2P23975 617 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 GCAP28676 217 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 GTF2E2P29084 291 aaKnown RBP12.55□□□□□ -0.4
U2AF1-211ENST00000486519 MMP16P51512 607 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 CDK5R2Q13319 367 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 DOC2BQ14184 412 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 PGS1Q32NB8 556 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 ZNF718Q3SXZ3 478 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 TTMPQ5BVD1 217 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 MBNL2Q5VZF2 373 aaKnown RBP12.55□□□□□ -0.4
U2AF1-211ENST00000486519 PGBD2Q6P3X8 592 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 PIWIL3Q7Z3Z3 882 aaKnown RBP12.55□□□□□ -0.4
U2AF1-211ENST00000486519 ANKRD46Q86W74 232 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 OR4K5Q8NGD3 323 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 LHX4Q969G2 390 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 FUT8Q9BYC5 575 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 POFUT1Q9H488 388 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 B3GAT2Q9NPZ5 323 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 TMEM38BQ9NVV0 291 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 VPREB3Q9UKI3 123 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 U3KQK5 164 aa12.55□□□□□ -0.4
U2AF1-211ENST00000486519 IGKV1D-42A0A075B6H8 117 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 LOC102725191A0A1B0GVB3 256 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 AZIN1O14977 448 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 PEX11AO75192 247 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 SERPINI2O75830 405 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 NEFHP12036 1026 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 IL7RP16871 459 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 GABRA5P31644 462 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 RPL3P39023 403 aaKnown RBP12.54□□□□□ -0.4
U2AF1-211ENST00000486519 HOXA4Q00056 320 aaPredicted RBP12.54□□□□□ -0.4
U2AF1-211ENST00000486519 PRB3Q04118 309 aaPredicted RBP12.54□□□□□ -0.4
U2AF1-211ENST00000486519 KANK2Q63ZY3 851 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 LRFN4Q6PJG9 635 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 ZYG11AQ6WRX3 759 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 ZNF841Q6ZN19 808 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 H1FNTQ75WM6 255 aaPredicted RBP12.54□□□□□ -0.4
U2AF1-211ENST00000486519 SERPINA11Q86U17 422 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 OR4A15Q8NGL6 344 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 R3HDM4Q96D70 268 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 NEIL1Q96FI4 390 aaPredicted RBP12.54□□□□□ -0.4
U2AF1-211ENST00000486519 SAMD8Q96LT4 415 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 C3orf30Q96M34 536 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 OCSTAMPQ9BR26 566 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 PPA2Q9H2U2 334 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 ZDHHC18Q9NUE0 388 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 ATAD3AQ9NVI7 634 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 ZDHHC8Q9ULC8 765 aa12.54□□□□□ -0.4
U2AF1-211ENST00000486519 LOC100509620A0A075B734 347 aa12.53□□□□□ -0.4
U2AF1-211ENST00000486519 LRRN3E7EW58 273 aa12.53□□□□□ -0.4
U2AF1-211ENST00000486519 TOX4O94842 621 aa12.53□□□□□ -0.4
U2AF1-211ENST00000486519 MMP7P09237 267 aaPredicted RBP12.53□□□□□ -0.4
U2AF1-211ENST00000486519 CD28P10747 220 aa12.53□□□□□ -0.4
U2AF1-211ENST00000486519 UQCRBP14927 111 aa12.53□□□□□ -0.4
U2AF1-211ENST00000486519 PTMSP20962 102 aa12.53□□□□□ -0.4
U2AF1-211ENST00000486519 ARRB2P32121 409 aa12.53□□□□□ -0.4
U2AF1-211ENST00000486519 RPL4P36578 427 aaKnown RBP12.53□□□□□ -0.4
U2AF1-211ENST00000486519 PITPNBP48739 271 aa12.53□□□□□ -0.4
U2AF1-211ENST00000486519 HPCAP84074 193 aa12.53□□□□□ -0.4
U2AF1-211ENST00000486519 COX10Q12887 443 aa12.53□□□□□ -0.4
U2AF1-211ENST00000486519 UGT3A2Q3SY77 523 aa12.53□□□□□ -0.4
U2AF1-211ENST00000486519 XKR7Q5GH72 579 aa12.53□□□□□ -0.4
U2AF1-211ENST00000486519 WDR25Q64LD2 544 aaPredicted RBP12.53□□□□□ -0.4
U2AF1-211ENST00000486519 OR2Z1Q8NG97 314 aa12.53□□□□□ -0.4
U2AF1-211ENST00000486519 TMEM54Q969K7 222 aa12.53□□□□□ -0.4
U2AF1-211ENST00000486519 DPY30Q9C005 99 aa12.53□□□□□ -0.4
U2AF1-211ENST00000486519 ZNF180Q9UJW8 692 aa12.53□□□□□ -0.4
U2AF1-211ENST00000486519 PPP1R3CQ9UQK1 317 aa12.53□□□□□ -0.4
U2AF1-211ENST00000486519 USH1CQ9Y6N9 552 aa12.53□□□□□ -0.4
U2AF1-211ENST00000486519 STAB2Q8WWQ8 2551 aa12.52□□□□□ -0.4
U2AF1-211ENST00000486519 A0A087WUJ7 227 aa12.52□□□□□ -0.41
U2AF1-211ENST00000486519 IGHV3-64DA0A0J9YX35 117 aa12.52□□□□□ -0.41
U2AF1-211ENST00000486519 MEGF11A6BM72 1044 aa12.52□□□□□ -0.41
U2AF1-211ENST00000486519 GOLGA6L6A8MZA4 724 aa12.52□□□□□ -0.41
U2AF1-211ENST00000486519 P2RY10O00398 339 aa12.52□□□□□ -0.41
U2AF1-211ENST00000486519 NPHS1O60500 1241 aa12.52□□□□□ -0.41
U2AF1-211ENST00000486519 CPSF4O95639 269 aaKnown RBP12.52□□□□□ -0.41
U2AF1-211ENST00000486519 AGR2O95994 175 aa12.52□□□□□ -0.41
U2AF1-211ENST00000486519 SNRPAP09012 282 aaKnown RBP12.52□□□□□ -0.41
U2AF1-211ENST00000486519 NCF2P19878 526 aaPredicted RBP12.52□□□□□ -0.41
U2AF1-211ENST00000486519 MAPK1P28482 360 aa12.52□□□□□ -0.41
U2AF1-211ENST00000486519 PHBP35232 272 aa12.52□□□□□ -0.41
U2AF1-211ENST00000486519 CSNK1A1P48729 337 aa12.52□□□□□ -0.41
U2AF1-211ENST00000486519 CAV1Q03135 178 aa12.52□□□□□ -0.41
U2AF1-211ENST00000486519 PSG7Q13046 419 aa12.52□□□□□ -0.41
U2AF1-211ENST00000486519 MTX3Q5HYI7 312 aa12.52□□□□□ -0.41
U2AF1-211ENST00000486519 DMRTC1Q5HYR2 192 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms