RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 NMNAT1Q9HAN9 279 aaPredicted RBP15.84■□□□□ 0.13
CLDN11-206ENST00000486429 FBXO9Q9UK97 447 aaPredicted RBP15.84■□□□□ 0.13
CLDN11-206ENST00000486429 TMEM5Q9Y2B1 443 aa15.84■□□□□ 0.13
CLDN11-206ENST00000486429 SPEF1Q9Y4P9 236 aa15.84■□□□□ 0.13
CLDN11-206ENST00000486429 V9GYQ6 96 aa15.84■□□□□ 0.13
CLDN11-206ENST00000486429 CSPG4Q6UVK1 2322 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 hCG_2039718K7EN88 272 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 DYNC1I1O14576 645 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 SLC2A10O95528 541 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 HSD17B1P14061 328 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 PPOXP50336 477 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 CTXN1P60606 82 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 MXRA7P84157 204 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 GALK2Q01415 458 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 FMODQ06828 376 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 RAB39AQ14964 217 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 FXNQ16595 210 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 TMEM53Q6P2H8 277 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 C16orf89Q6UX73 402 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 TSEN54Q7Z6J9 526 aaKnown RBP15.83■□□□□ 0.12
CLDN11-206ENST00000486429 SVOPLQ8N434 492 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 FGFBP3Q8TAT2 258 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 SLC7A13Q8TCU3 470 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 FAM168AQ92567 244 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 KCNK17Q96T54 332 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 VRK1Q99986 396 aaPredicted RBP15.83■□□□□ 0.12
CLDN11-206ENST00000486429 ALG12Q9BV10 488 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 NDEL1Q9GZM8 345 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 GORASP2Q9H8Y8 452 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 RNF121Q9H920 327 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 NDUFAF4Q9P032 175 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 ARFGEF3Q5TH69 2177 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 HIVEP2P31629 2446 aa15.83■□□□□ 0.12
CLDN11-206ENST00000486429 FN1P02751 2386 aaKnown RBP15.82■□□□□ 0.12
CLDN11-206ENST00000486429 A0A1W2PRQ8 180 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 A6NIZ1 184 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 LY6HO94772 140 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 SERPINA5P05154 406 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 ZNF35P13682 527 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 RHCEP18577 417 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 NR4A1P22736 598 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 RAP1BP61224 184 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 RPS23P62266 143 aaKnown RBP15.82■□□□□ 0.12
CLDN11-206ENST00000486429 RAP1AP62834 184 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 MRPS34P82930 218 aaKnown RBP15.82■□□□□ 0.12
CLDN11-206ENST00000486429 VLDLRP98155 873 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 DGCR6Q14129 220 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 GKAP1Q5VSY0 366 aaPredicted RBP15.82■□□□□ 0.12
CLDN11-206ENST00000486429 TBPL2Q6SJ96 375 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 TMPRSS11FQ6ZWK6 438 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 ZNF584Q8IVC4 421 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 ANKS4BQ8N8V4 417 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 LRRC75AQ8NAA5 344 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 OR10H5Q8NGA6 315 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 FNDC8Q8TC99 324 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 NMD3Q96D46 503 aaKnown RBP15.82■□□□□ 0.12
CLDN11-206ENST00000486429 TSPAN32Q96QS1 320 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 C1orf198Q9H425 327 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 DYNLRB1Q9NP97 96 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 CMAHPQ9Y471 501 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 CR1P17927 2039 aa15.82■□□□□ 0.12
CLDN11-206ENST00000486429 CDC42EP2O14613 210 aa15.81■□□□□ 0.12
CLDN11-206ENST00000486429 ARPC2O15144 300 aa15.81■□□□□ 0.12
CLDN11-206ENST00000486429 MGRN1O60291 552 aa15.81■□□□□ 0.12
CLDN11-206ENST00000486429 F12P00748 615 aaPredicted RBP15.81■□□□□ 0.12
CLDN11-206ENST00000486429 SLC25A16P16260 332 aa15.81■□□□□ 0.12
CLDN11-206ENST00000486429 ITGA2P17301 1181 aa15.81■□□□□ 0.12
CLDN11-206ENST00000486429 RPL4P36578 427 aaKnown RBP15.81■□□□□ 0.12
CLDN11-206ENST00000486429 KRTAP1-1Q07627 177 aa15.81■□□□□ 0.12
CLDN11-206ENST00000486429 FHL1Q13642 323 aa15.81■□□□□ 0.12
CLDN11-206ENST00000486429 KRT72Q14CN4 511 aa15.81■□□□□ 0.12
CLDN11-206ENST00000486429 PODNL1Q6PEZ8 512 aa15.81■□□□□ 0.12
CLDN11-206ENST00000486429 DEFB107AQ8IZN7 70 aa15.81■□□□□ 0.12
CLDN11-206ENST00000486429 SLC30A7Q8NEW0 376 aa15.81■□□□□ 0.12
CLDN11-206ENST00000486429 ZNF519Q8TB69 540 aa15.81■□□□□ 0.12
CLDN11-206ENST00000486429 NSMAFQ92636 917 aa15.81■□□□□ 0.12
CLDN11-206ENST00000486429 FAM46AQ96IP4 442 aaKnown RBP15.81■□□□□ 0.12
CLDN11-206ENST00000486429 C7orf34Q96L11 122 aa15.81■□□□□ 0.12
CLDN11-206ENST00000486429 NSMCE2Q96MF7 247 aa15.81■□□□□ 0.12
CLDN11-206ENST00000486429 RBP7Q96R05 134 aa15.81■□□□□ 0.12
CLDN11-206ENST00000486429 TNFRSF13CQ96RJ3 184 aa15.81■□□□□ 0.12
CLDN11-206ENST00000486429 CDRT15Q96T59 188 aa15.81■□□□□ 0.12
CLDN11-206ENST00000486429 KRCC1Q9NPI7 259 aaPredicted RBP15.81■□□□□ 0.12
CLDN11-206ENST00000486429 SLC7A8Q9UHI5 535 aa15.81■□□□□ 0.12
CLDN11-206ENST00000486429 ZNF346Q9UL40 294 aaKnown RBP15.81■□□□□ 0.12
CLDN11-206ENST00000486429 UGT2A1Q9Y4X1 527 aa15.81■□□□□ 0.12
CLDN11-206ENST00000486429 GPRIN2O60269 458 aa15.8■□□□□ 0.12
CLDN11-206ENST00000486429 DIRAS1O95057 198 aa15.8■□□□□ 0.12
CLDN11-206ENST00000486429 TP53P04637 393 aaPredicted RBP15.8■□□□□ 0.12
CLDN11-206ENST00000486429 ERCC1P07992 297 aaPredicted RBP15.8■□□□□ 0.12
CLDN11-206ENST00000486429 PCSK6P29122 969 aa15.8■□□□□ 0.12
CLDN11-206ENST00000486429 CDAP32320 146 aa15.8■□□□□ 0.12
CLDN11-206ENST00000486429 GLRXP35754 106 aa15.8■□□□□ 0.12
CLDN11-206ENST00000486429 MNAT1P51948 309 aa15.8■□□□□ 0.12
CLDN11-206ENST00000486429 PPP2R2BQ00005 443 aa15.8■□□□□ 0.12
CLDN11-206ENST00000486429 PLP2Q04941 152 aa15.8■□□□□ 0.12
CLDN11-206ENST00000486429 ZBED5Q49AG3 693 aa15.8■□□□□ 0.12
CLDN11-206ENST00000486429 LRRC18Q8N456 261 aa15.8■□□□□ 0.12
CLDN11-206ENST00000486429 C10orf105Q8TEF2 133 aa15.8■□□□□ 0.12
CLDN11-206ENST00000486429 MRPL24Q96A35 216 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms