RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 C1orf122Q6ZSJ8 110 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 KLHL7Q8IXQ5 586 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 ICA1LQ8NDH6 482 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 OR7A2PQ8NGA2 310 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 OR4F17Q8NGA8 305 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 OR5P2Q8WZ92 322 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 MRRFQ96E11 262 aaKnown RBP6.8□□□□□ -1.32
XRN1-212ENST00000486211 MTERF3Q96E29 417 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 OR4F4Q96R69 305 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 FOXB1Q99853 325 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 MECRQ9BV79 373 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 TRIM15Q9C019 465 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 CDH20Q9HBT6 801 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 TNFRSF12AQ9NP84 129 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.8□□□□□ -1.32
XRN1-212ENST00000486211 ATP6V1HQ9UI12 483 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 POFUT2Q9Y2G5 429 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 STK38LQ9Y2H1 464 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 WDR45Q9Y484 360 aa6.8□□□□□ -1.32
XRN1-212ENST00000486211 LOC102725191A0A1B0GVB3 256 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 PLSCR5A0PG75 271 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 PRAMEF27A3QJZ7 478 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 DUXAA6NLW8 204 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 TMEM178BH3BS89 294 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 C6orf47O95873 294 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 IMPDH1P20839 514 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 MATN1P21941 496 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 CRHR1P34998 444 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 RPL4P36578 427 aaKnown RBP6.79□□□□□ -1.32
XRN1-212ENST00000486211 TNFAIP6P98066 277 aaPredicted RBP6.79□□□□□ -1.32
XRN1-212ENST00000486211 EMX1Q04741 257 aaPredicted RBP6.79□□□□□ -1.32
XRN1-212ENST00000486211 COX10Q12887 443 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 GSTA3Q16772 222 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 TEX35Q5T0J7 233 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 SPATA46Q5T0L3 261 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 THEM4Q5T1C6 240 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 ZBTB37Q5TC79 503 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 MBNL2Q5VZF2 373 aaKnown RBP6.79□□□□□ -1.32
XRN1-212ENST00000486211 C11orf88Q6PI97 169 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 NHLRC1Q6VVB1 395 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 C16orf62Q7Z3J2 963 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 RNF144BQ7Z419 303 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 NDUFA11Q86Y39 141 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 ZNF101Q8IZC7 436 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 PAPD5Q8NDF8 572 aaKnown RBP6.79□□□□□ -1.32
XRN1-212ENST00000486211 OR1J1Q8NGS3 322 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 MFSD8Q8NHS3 518 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 PPP1R35Q8TAP8 253 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 FBXO25Q8TCJ0 367 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 MOAP1Q96BY2 351 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 RBMXL1Q96E39 390 aaKnown RBP6.79□□□□□ -1.32
XRN1-212ENST00000486211 L3HYPDHQ96EM0 354 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 NEIL1Q96FI4 390 aaPredicted RBP6.79□□□□□ -1.32
XRN1-212ENST00000486211 MAP6Q96JE9 813 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 LRR1Q96L50 414 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 GSTO2Q9H4Y5 243 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 CNTD2Q9H8S5 307 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 MSL2Q9HCI7 577 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 MID1IP1Q9NPA3 183 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 RRAGDQ9NQL2 400 aaPredicted RBP6.79□□□□□ -1.32
XRN1-212ENST00000486211 POLE3Q9NRF9 147 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 CYSLTR2Q9NS75 346 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 C1orf109Q9NX04 203 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 ZNRD1Q9P1U0 126 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 MIOXQ9UGB7 285 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 ZDHHC8Q9ULC8 765 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 U3KQE9 123 aa6.79□□□□□ -1.32
XRN1-212ENST00000486211 CFAP73A6NFT4 308 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 ZNF879B4DU55 563 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 E9PQ18 207 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 TOX4O94842 621 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 HPRP00739 348 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 CD28P10747 220 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 SLC6A2P23975 617 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 EPHA3P29320 983 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 LIPAP38571 399 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 WNT5AP41221 380 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 ETV4P43268 484 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 KIR2DS4P43632 304 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 PITPNBP48739 271 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 PRKAA2P54646 552 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 HBA1P69905 142 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 EGR4Q05215 589 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 C1DQ13901 141 aaKnown RBP6.78□□□□□ -1.32
XRN1-212ENST00000486211 UAP1Q16222 522 aaPredicted RBP6.78□□□□□ -1.32
XRN1-212ENST00000486211 TBC1D28Q2M2D7 210 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 RFTN2Q52LD8 501 aaPredicted RBP6.78□□□□□ -1.32
XRN1-212ENST00000486211 LIPMQ5VYY2 423 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 SLC27A4Q6P1M0 643 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 ZNF841Q6ZN19 808 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 C6orf120Q7Z4R8 191 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 CLEC4FQ8N1N0 589 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 OR2T11Q8NH01 316 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 PNPT1Q8TCS8 783 aaKnown RBP6.78□□□□□ -1.32
XRN1-212ENST00000486211 MIPOL1Q8TD10 442 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 KLF14Q8TD94 323 aaPredicted RBP6.78□□□□□ -1.32
XRN1-212ENST00000486211 ROPN1LQ96C74 230 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 PLEKHA8Q96JA3 519 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 SAMD8Q96LT4 415 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 RHOXF2Q9BQY4 288 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms