RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 WNT11O96014 354 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 TP53P04637 393 aaPredicted RBP10.01□□□□□ -0.81
NUP50-216ENST00000486184 HMGN1P05114 100 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 PAICSP22234 425 aaKnown RBP10.01□□□□□ -0.81
NUP50-216ENST00000486184 CRABP1P29762 137 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 CAPZA2P47755 286 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 GIPRP48546 466 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 CENPAP49450 140 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 FOXG1P55316 489 aaPredicted RBP10.01□□□□□ -0.81
NUP50-216ENST00000486184 FMODQ06828 376 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 GABRA6Q16445 453 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 HIST3H3Q16695 136 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 LRRC36Q1X8D7 754 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 SP5Q6BEB4 398 aaPredicted RBP10.01□□□□□ -0.81
NUP50-216ENST00000486184 LINGO2Q7L985 606 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 SSX8Q7RTT4 187 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 P2RY8Q86VZ1 359 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 IQCF1Q8N6M8 205 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 OR4Q3Q8NH05 313 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 NANOS1Q8WY41 292 aaKnown RBP10.01□□□□□ -0.81
NUP50-216ENST00000486184 HSD17B8Q92506 261 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 OTULINQ96BN8 352 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 ZC3HAV1LQ96H79 300 aaKnown RBP10.01□□□□□ -0.81
NUP50-216ENST00000486184 SNX18Q96RF0 628 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 NMNAT3Q96T66 252 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 SYT4Q9H2B2 425 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 KCNN2Q9H2S1 579 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 SEC61A2Q9H9S3 476 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 C8orf4Q9NR00 106 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 USE1Q9NZ43 259 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 VSX1Q9NZR4 365 aaPredicted RBP10.01□□□□□ -0.81
NUP50-216ENST00000486184 AMDHD2Q9Y303 409 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 RRP15Q9Y3B9 282 aaKnown RBP10.01□□□□□ -0.81
NUP50-216ENST00000486184 RELNP78509 3460 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 ALPK2Q86TB3 2170 aa10□□□□□ -0.81
NUP50-216ENST00000486184 A0A096LPE4 126 aa10□□□□□ -0.81
NUP50-216ENST00000486184 A0A1W2PPZ6 126 aa10□□□□□ -0.81
NUP50-216ENST00000486184 OR5H1A6NKK0 313 aa10□□□□□ -0.81
NUP50-216ENST00000486184 SLC16A7O60669 478 aa10□□□□□ -0.81
NUP50-216ENST00000486184 KHDRBS3O75525 346 aaKnown RBP10□□□□□ -0.81
NUP50-216ENST00000486184 SEC14L2O76054 403 aa10□□□□□ -0.81
NUP50-216ENST00000486184 ALPLP05186 524 aa10□□□□□ -0.81
NUP50-216ENST00000486184 B4GALT1P15291 398 aa10□□□□□ -0.81
NUP50-216ENST00000486184 NPR2P20594 1047 aa10□□□□□ -0.81
NUP50-216ENST00000486184 CCKARP32238 428 aa10□□□□□ -0.81
NUP50-216ENST00000486184 CDKN2AP42771 156 aaKnown RBP10□□□□□ -0.81
NUP50-216ENST00000486184 SLC34A1Q06495 639 aa10□□□□□ -0.81
NUP50-216ENST00000486184 NPRL3Q12980 569 aa10□□□□□ -0.81
NUP50-216ENST00000486184 PPA1Q15181 289 aa10□□□□□ -0.81
NUP50-216ENST00000486184 PTGES3Q15185 160 aaKnown RBP10□□□□□ -0.81
NUP50-216ENST00000486184 TBRG1Q3YBR2 411 aa10□□□□□ -0.81
NUP50-216ENST00000486184 TIMM23BQ5SRD1 257 aa10□□□□□ -0.81
NUP50-216ENST00000486184 C10orf128Q5T292 105 aa10□□□□□ -0.81
NUP50-216ENST00000486184 LPCAT4Q643R3 524 aa10□□□□□ -0.81
NUP50-216ENST00000486184 LRFN4Q6PJG9 635 aa10□□□□□ -0.81
NUP50-216ENST00000486184 PTCHD4Q6ZW05 846 aa10□□□□□ -0.81
NUP50-216ENST00000486184 WFDC8Q8IUA0 241 aa10□□□□□ -0.81
NUP50-216ENST00000486184 DMRTC2Q8IXT2 367 aaPredicted RBP10□□□□□ -0.81
NUP50-216ENST00000486184 OR52N5Q8NH56 324 aa10□□□□□ -0.81
NUP50-216ENST00000486184 LINC01560Q8TB33 94 aa10□□□□□ -0.81
NUP50-216ENST00000486184 DACH2Q96NX9 599 aa10□□□□□ -0.81
NUP50-216ENST00000486184 PSMG3-AS1Q96PY0 264 aa10□□□□□ -0.81
NUP50-216ENST00000486184 GABARAPL3Q9BY60 117 aa10□□□□□ -0.81
NUP50-216ENST00000486184 RNPEPL1Q9HAU8 725 aa10□□□□□ -0.81
NUP50-216ENST00000486184 SLC25A19Q9HC21 320 aa10□□□□□ -0.81
NUP50-216ENST00000486184 NGBQ9NPG2 151 aa10□□□□□ -0.81
NUP50-216ENST00000486184 OBP2BQ9NPH6 170 aa10□□□□□ -0.81
NUP50-216ENST00000486184 RPRD1BQ9NQG5 326 aaKnown RBP10□□□□□ -0.81
NUP50-216ENST00000486184 CMC2Q9NRP2 79 aa10□□□□□ -0.81
NUP50-216ENST00000486184 TMEFF2Q9UIK5 374 aaPredicted RBP10□□□□□ -0.81
NUP50-216ENST00000486184 ICE1Q9Y2F5 2266 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 PRR23D1E9PI22 279 aaPredicted RBP9.99□□□□□ -0.81
NUP50-216ENST00000486184 HLA-DQA2P01906 255 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 PRR23D2P0DMB1 279 aaPredicted RBP9.99□□□□□ -0.81
NUP50-216ENST00000486184 OR8G3PP0DMU2 310 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 PEX2P28328 305 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 ZNF133P52736 654 aaPredicted RBP9.99□□□□□ -0.81
NUP50-216ENST00000486184 CDK5Q00535 292 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 SNAPC1Q16533 368 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 SGCAQ16586 387 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 ZIK1Q3SY52 487 aaPredicted RBP9.99□□□□□ -0.81
NUP50-216ENST00000486184 HIKESHIQ53FT3 197 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 C1QTNF12Q5T7M4 302 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 TMEM236Q5W0B7 351 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 FBXW10Q5XX13 1052 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 SLC25A47Q6Q0C1 308 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 CCDC36Q8IYA8 594 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 GALNT4Q8N4A0 578 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 PACRGLQ8N7B6 248 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 CYB561A3Q8NBI2 242 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 SLC37A3Q8NCC5 494 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 PROKR2Q8NFJ6 384 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 OR2T4Q8NH00 348 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 FAM222BQ8WU58 562 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 BCL2L2Q92843 193 aaPredicted RBP9.99□□□□□ -0.81
NUP50-216ENST00000486184 ZNF837Q96EG3 531 aaPredicted RBP9.99□□□□□ -0.81
NUP50-216ENST00000486184 MUS81Q96NY9 551 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 WFIKKN1Q96NZ8 548 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 SPOCK3Q9BQ16 436 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 NUAK2Q9H093 628 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms