RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 SLC22A23A1A5C7 686 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 PRSS37A4D1T9 235 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 ZNF503-AS2A6NEH8 195 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 H3BN98 237 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 ABCD4O14678 606 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 IMPA2O14732 288 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 FARS2O95363 451 aaKnown RBP10.34□□□□□ -0.75
HPS4-214ENST00000485842 TXNDC12O95881 172 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 HLA-HP01893 362 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 FCGR1AP12314 374 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 HOXB1P14653 301 aaPredicted RBP10.34□□□□□ -0.75
HPS4-214ENST00000485842 CDAP32320 146 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 PIGFQ07326 219 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 SPOCK1Q08629 439 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 NPRL3Q12980 569 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 ZSCAN26Q16670 478 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 SLC36A3Q495N2 470 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 THEM4Q5T1C6 240 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 SLC35F1Q5T1Q4 408 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 ADAM5Q6NVV9 412 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 LEG1Q6P5S2 330 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 SHQ1Q6PI26 577 aaKnown RBP10.34□□□□□ -0.75
HPS4-214ENST00000485842 SLC25A47Q6Q0C1 308 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 TMEM108Q6UXF1 575 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 PTCHD4Q6ZW05 846 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 ZNF627Q7L945 461 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 ADCK1Q86TW2 530 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 MDP1Q86V88 176 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 ATG16L2Q8NAA4 619 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 KBTBD8Q8NFY9 601 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 OR4K13Q8NH42 304 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 OR5K1Q8NHB7 308 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 TEX47Q8TBZ9 253 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 FNDC8Q8TC99 324 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 NANOS1Q8WY41 292 aaKnown RBP10.34□□□□□ -0.75
HPS4-214ENST00000485842 BOD1Q96IK1 185 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 SH3GL3Q99963 347 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 BDH2Q9BUT1 245 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 TSSK6Q9BXA6 273 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 SYT4Q9H2B2 425 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 SEC61A2Q9H9S3 476 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 UBTD1Q9HAC8 227 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 ZNF556Q9HAH1 456 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 SMURF2Q9HAU4 748 aa10.34□□□□□ -0.75
HPS4-214ENST00000485842 HRNRQ86YZ3 2850 aaPredicted RBP10.34□□□□□ -0.75
HPS4-214ENST00000485842 ARPC3O15145 178 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 ENTPD5O75356 428 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 CELA3BP08861 270 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 OR8G3PP0DMU2 310 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 APEHP13798 732 aaKnown RBP10.33□□□□□ -0.76
HPS4-214ENST00000485842 ANXA8P13928 327 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 HIST1H1CP16403 213 aaKnown RBP10.33□□□□□ -0.76
HPS4-214ENST00000485842 CTLA4P16410 223 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 ZNF23P17027 643 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 PTAFRP25105 342 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 CD40P25942 277 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 POU1F1P28069 291 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 CDKN2AP42771 156 aaKnown RBP10.33□□□□□ -0.76
HPS4-214ENST00000485842 PTDSS1P48651 473 aaKnown RBP10.33□□□□□ -0.76
HPS4-214ENST00000485842 IDH3GP51553 393 aaPredicted RBP10.33□□□□□ -0.76
HPS4-214ENST00000485842 ZNF133P52736 654 aaPredicted RBP10.33□□□□□ -0.76
HPS4-214ENST00000485842 MRPS34P82930 218 aaKnown RBP10.33□□□□□ -0.76
HPS4-214ENST00000485842 SGCAQ16586 387 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 GSG1Q2KHT4 349 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 CD300LDQ6UXZ3 194 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 SKA3Q8IX90 412 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 CCDC36Q8IYA8 594 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 LRRC18Q8N456 261 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 IQCF1Q8N6M8 205 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 ICA1LQ8NDH6 482 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 SDR9C7Q8NEX9 313 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 RADILQ96JH8 1075 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 FOXN4Q96NZ1 517 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 SLC38A2Q96QD8 506 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 NMNAT3Q96T66 252 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 SEMA6AQ9H2E6 1030 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 LIME1Q9H400 295 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 NOX3Q9HBY0 568 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 IL20Q9NYY1 176 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 VSX1Q9NZR4 365 aaPredicted RBP10.33□□□□□ -0.76
HPS4-214ENST00000485842 UGT2A1Q9Y4X1 527 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 APCP25054 2843 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 ITPR2Q14571 2701 aa10.33□□□□□ -0.76
HPS4-214ENST00000485842 CADP27708 2225 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 IGHV1-18A0A0C4DH31 117 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 ERICH4A6NGS2 130 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 SAC3D1A6NKF1 404 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 ANKRD65E5RJM6 399 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 ATP6V1G2-DDX39BF2Z307 99 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 BHLHE40O14503 412 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 IDH3BO43837 385 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 AHCYL1O43865 530 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 SLC16A7O60669 478 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 UBL3O95164 117 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 RAB36O95755 333 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 RENP00797 406 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 TP53P04637 393 aaPredicted RBP10.32□□□□□ -0.76
HPS4-214ENST00000485842 PATE4P0C8F1 98 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 CBR1P16152 277 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 GUCA1AP43080 201 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms