RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 ETV1P50549 477 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 EMX1Q04741 257 aaPredicted RBP12.86□□□□□ -0.35
LRIF1-202ENST00000485275 GUSBP1Q15486 140 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 MEP1BQ16820 701 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 ZNF585AQ6P3V2 769 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 SLC25A47Q6Q0C1 308 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 SSX6Q7RTT6 188 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 NUFIP2Q7Z417 695 aaKnown RBP12.86□□□□□ -0.35
LRIF1-202ENST00000485275 TIGD4Q8IY51 512 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 C20orf196Q8IYI0 205 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 GCNT2Q8N0V5 402 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 STX19Q8N4C7 294 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 ALKBH3Q96Q83 286 aaPredicted RBP12.86□□□□□ -0.35
LRIF1-202ENST00000485275 CALHM2Q9HA72 323 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 CCNB1IP1Q9NPC3 277 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 GLTPQ9NZD2 209 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 SCOCQ9UIL1 159 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 UGT2A1Q9Y4X1 527 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 PHF3Q92576 2039 aaKnown RBP12.86□□□□□ -0.35
LRIF1-202ENST00000485275 SNTNA6NMZ2 147 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 ZNF724A8MTY0 619 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 PRR32B1ATL7 298 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 M0R3G1 203 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 IGHV3-9P01782 118 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 TPOP07202 933 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 QDPRP09417 244 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 LIMS3P0CW19 117 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 LIMS4P0CW20 117 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 ZNF133P52736 654 aaPredicted RBP12.86□□□□□ -0.35
LRIF1-202ENST00000485275 TUBA4AP68366 448 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 TMED1Q13445 227 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 RNPS1Q15287 305 aaKnown RBP12.86□□□□□ -0.35
LRIF1-202ENST00000485275 C3P1Q6ZMU1 363 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 KCTD8Q6ZWB6 473 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 AAED1Q7RTV5 226 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 HDDC2Q7Z4H3 204 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 SLC26A10Q8NG04 563 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 MYDGFQ969H8 173 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 TMEM80Q96HE8 168 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 TBX5Q99593 518 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 CDCA4Q9BXL8 241 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 MARCH7Q9H992 704 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 COPS3Q9UNS2 423 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 KLHDC2Q9Y2U9 406 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 ZGRF1Q86YA3 2104 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 AHCYL1O43865 530 aa12.85□□□□□ -0.35
LRIF1-202ENST00000485275 TOXO94900 526 aa12.85□□□□□ -0.35
LRIF1-202ENST00000485275 RAB36O95755 333 aa12.85□□□□□ -0.35
LRIF1-202ENST00000485275 CLPTM1O96005 669 aa12.85□□□□□ -0.35
LRIF1-202ENST00000485275 LCKP06239 509 aa12.85□□□□□ -0.35
LRIF1-202ENST00000485275 CDAP32320 146 aa12.85□□□□□ -0.35
LRIF1-202ENST00000485275 CSNK1A1P48729 337 aa12.85□□□□□ -0.35
LRIF1-202ENST00000485275 NEDD8Q15843 81 aa12.85□□□□□ -0.35
LRIF1-202ENST00000485275 THEM4Q5T1C6 240 aa12.85□□□□□ -0.35
LRIF1-202ENST00000485275 LCN1P1Q5VSP4 162 aa12.85□□□□□ -0.35
LRIF1-202ENST00000485275 FAM57AQ8TBR7 257 aa12.85□□□□□ -0.35
LRIF1-202ENST00000485275 CNN2Q99439 309 aaKnown RBP12.85□□□□□ -0.35
LRIF1-202ENST00000485275 TTTY10Q9BZA0 68 aa12.85□□□□□ -0.35
LRIF1-202ENST00000485275 ACOT13Q9NPJ3 140 aa12.85□□□□□ -0.35
LRIF1-202ENST00000485275 MOKQ9UQ07 419 aa12.85□□□□□ -0.35
LRIF1-202ENST00000485275 NOSIPQ9Y314 301 aaKnown RBP12.85□□□□□ -0.35
LRIF1-202ENST00000485275 LSM2Q9Y333 95 aaKnown RBP12.85□□□□□ -0.35
LRIF1-202ENST00000485275 PCDHGB1Q9Y5G3 927 aa12.85□□□□□ -0.35
LRIF1-202ENST00000485275 IGSF10Q6WRI0 2623 aa12.85□□□□□ -0.35
LRIF1-202ENST00000485275 C12orf71A8MTZ7 269 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 AHRRA9YTQ3 701 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 CENPBD1B2RD01 187 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 SS18L1O75177 396 aaPredicted RBP12.84□□□□□ -0.35
LRIF1-202ENST00000485275 WNT11O96014 354 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 YES1P07947 543 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 FCGR2AP12318 317 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 CRABP1P29762 137 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 ZNF85Q03923 595 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 TBCEQ15813 527 aaPredicted RBP12.84□□□□□ -0.35
LRIF1-202ENST00000485275 KLHL22Q53GT1 634 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 TSPO2Q5TGU0 170 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 NSUN5P2Q63ZY6 315 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.84□□□□□ -0.35
LRIF1-202ENST00000485275 ERI1Q8IV48 349 aaKnown RBP12.84□□□□□ -0.35
LRIF1-202ENST00000485275 OR6N1Q8NGY5 312 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 TMIGD2Q96BF3 282 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 OR5M11Q96RB7 305 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 JAM3Q9BX67 310 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 EMC3Q9P0I2 261 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 A0A1W2PQL4 384 aaPredicted RBP12.84□□□□□ -0.35
LRIF1-202ENST00000485275 GPR171O14626 319 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 INMTO95050 263 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 DCKP27707 260 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 ALDH3B2P48448 385 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 FOXG1P55316 489 aaPredicted RBP12.84□□□□□ -0.35
LRIF1-202ENST00000485275 FOXF2Q12947 444 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 ST3GAL2Q16842 350 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 C10orf128Q5T292 105 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 OR2G6Q5TZ20 316 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 P4HA3Q7Z4N8 544 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 LHFPL3Q86UP9 236 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 POMGNT2Q8NAT1 580 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 ZNF485Q8NCK3 441 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 NAXEQ8NCW5 288 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 OR10H4Q8NGA5 316 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms