RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 A0A1W2PR80 420 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 A0A1W2PRG6 482 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 NPIPB13A6NJU9 1138 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 NPIPB4C9JG80 1138 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 ATP6V1G2-DDX39BF2Z307 99 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 M0R3G1 203 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 MRASO14807 208 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 ATP8B1O43520 1251 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 CD5LO43866 347 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 SSX4O60224 188 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 TPST1O60507 370 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 UPK3AO75631 287 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 UBL3O95164 117 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 OR5F1O95221 314 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 RAB36O95755 333 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 BCL10O95999 233 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 IGHG1P01857 330 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 BGLAPP02818 100 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 ADORA3P0DMS8 318 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 OR8G3PP0DMU2 310 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 ACVR1BP36896 505 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 GUCA1AP43080 201 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-215ENST00000484203 CAPZA2P47755 286 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 CSNK1A1P48729 337 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 PPOXP50336 477 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 PDLIM4P50479 330 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 DAP3P51398 398 aaKnown RBP5.35□□□□□ -1.55
PTCD3-215ENST00000484203 ARF1P84077 181 aaKnown RBP5.35□□□□□ -1.55
PTCD3-215ENST00000484203 NAAAQ02083 359 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 LOXL1Q08397 574 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-215ENST00000484203 ZNF74Q16587 644 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 MOGQ16653 247 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 DUSP7Q16829 419 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 GSG1Q2KHT4 349 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 CEACAM16Q2WEN9 425 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 ANKDD1AQ495B1 522 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 ENTPD8Q5MY95 495 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 C11orf71Q6IPW1 123 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 DNM1P46Q6ZS02 220 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 SLC46A3Q7Z3Q1 461 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 NANOGNBQ7Z5D8 188 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 C1orf174Q8IYL3 243 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 SMYD1Q8NB12 490 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 OR6T1Q8NGN1 323 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 RP9Q8TA86 221 aaKnown RBP5.35□□□□□ -1.55
PTCD3-215ENST00000484203 ADAMTS16Q8TE57 1224 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 NEU4Q8WWR8 484 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-215ENST00000484203 NEUROG1Q92886 237 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 ZNF566Q969W8 418 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 SLC25A44Q96H78 314 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-215ENST00000484203 HOPXQ9BPY8 73 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-215ENST00000484203 SPATA25Q9BR10 227 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 PIMREGQ9BSJ6 248 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 ZNF426Q9BUY5 554 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 LRMDAQ9H2I8 198 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 KCNN2Q9H2S1 579 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 ZCCHC4Q9H5U6 513 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 SAR1AQ9NR31 198 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 TMEM160Q9NX00 188 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 LPAR3Q9UBY5 353 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 MOKQ9UQ07 419 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 SH3GLB1Q9Y371 365 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 VPS13CQ709C8 3753 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 IGHV1-18A0A0C4DH31 117 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 ELOVL7A1L3X0 281 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 CPSF4LA6NMK7 179 aaKnown RBP5.34□□□□□ -1.55
PTCD3-215ENST00000484203 A8MV72 311 aaPredicted RBP5.34□□□□□ -1.55
PTCD3-215ENST00000484203 FAM220BPB1ANY3 271 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 MCIDASD6RGH6 385 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 MS4A18H0YCH9 400 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 M0R3H8 397 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 RNF13O43567 381 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 CRLF1O75462 422 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 GMNNO75496 209 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 CH25HO95992 272 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 MT-ND1P03886 318 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 MT-ND5P03915 603 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 OR4A8P0C604 315 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 CECR9P0C854 216 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 UMPSP11172 480 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 CD79AP11912 226 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 NPR2P20594 1047 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 USF1P22415 310 aaPredicted RBP5.34□□□□□ -1.55
PTCD3-215ENST00000484203 KDELR2P33947 212 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 GZMKP49863 264 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 ZNF84P51523 738 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 IDH3GP51553 393 aaPredicted RBP5.34□□□□□ -1.55
PTCD3-215ENST00000484203 SLURP1P55000 103 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 FOXG1P55316 489 aaPredicted RBP5.34□□□□□ -1.55
PTCD3-215ENST00000484203 TAS2R41P59536 307 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 VLDLRP98155 873 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 GALK2Q01415 458 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 PLP2Q04941 152 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 ST3GAL3Q11203 375 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 KLF10Q13118 480 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 CAMK2DQ13557 499 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 DAG1Q14118 895 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 MS4A18Q3C1V0 323 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 SLC36A2Q495M3 483 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 GLIPR1L2Q4G1C9 344 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms