RNA–Protein interactions for RNA: ENST00000483768.1

ZNF561-216, Transcript of zinc finger protein 561, humanhuman

TSL 1 (best)

Gene ZNF561, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-216ENST00000483768 HDAC3O15379 428 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 COCHO43405 550 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 SNAI2O43623 268 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 HSBP1O75506 76 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 ATP5HO75947 161 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 FARS2O95363 451 aaKnown RBP2.74□□□□□ -1.97
ZNF561-216ENST00000483768 BRI3O95415 125 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 SEC24AO95486 1093 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 C1orf105O95561 183 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 NTN1O95631 604 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 OXSR1O95747 527 aaPredicted RBP2.74□□□□□ -1.97
ZNF561-216ENST00000483768 NGFP01138 241 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 IGHV4-39P01824 125 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 GPIP06744 558 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 RETP07949 1114 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 KRT16P08779 473 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 SNHG28P0DPA3 235 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 SYT1P21579 422 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 UGT1A4P22310 534 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 EDNRAP25101 427 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 RPL9P32969 192 aaKnown RBP2.74□□□□□ -1.97
ZNF561-216ENST00000483768 MAP3K8P41279 467 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 NSG1P42857 185 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 XCR1P46094 333 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 CX3CR1P49238 355 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 MRPL19P49406 292 aaKnown RBP2.74□□□□□ -1.97
ZNF561-216ENST00000483768 CDC34P49427 236 aaPredicted RBP2.74□□□□□ -1.97
ZNF561-216ENST00000483768 CLDN18P56856 261 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 OR2B6P58173 313 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 ATP6V0D1P61421 351 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 HERV-K104P61576 105 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 RPS15AP62244 130 aaKnown RBP2.74□□□□□ -1.97
ZNF561-216ENST00000483768 CDR2Q01850 454 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 ST3GAL3Q11203 375 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 MADCAM1Q13477 382 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 P2RY6Q15077 328 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 PSG3Q16557 428 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 DUSP7Q16829 419 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 QRICH1Q2TAL8 776 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 HLA-BQ31612 363 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 PTPN20Q4JDL3 420 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 SLC22A6Q4U2R8 563 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 C10orf25Q5T742 122 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 C9orf139Q6ZV77 190 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 GPRIN3Q6ZVF9 776 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 BHLHA15Q7RTS1 189 aaPredicted RBP2.74□□□□□ -1.97
ZNF561-216ENST00000483768 HDDC2Q7Z4H3 204 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 ABHD12BQ7Z5M8 362 aaPredicted RBP2.74□□□□□ -1.97
ZNF561-216ENST00000483768 MRPL10Q7Z7H8 261 aaKnown RBP2.74□□□□□ -1.97
ZNF561-216ENST00000483768 C12orf56Q8IXR9 622 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 CMTM1Q8IZ96 169 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 SLC22A15Q8IZD6 547 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 SPAG16Q8N0X2 631 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 C17orf78Q8N4C9 275 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 JAGN1Q8N5M9 183 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 MS4A15Q8N5U1 240 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 NANOGP1Q8N7R0 232 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 TPRX1Q8N7U7 411 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 TTC29Q8NA56 475 aaPredicted RBP2.74□□□□□ -1.97
ZNF561-216ENST00000483768 CATSPER1Q8NEC5 780 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 OR9Q2Q8NGE9 314 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 OR56A4Q8NGH8 313 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 OR5B3Q8NH48 314 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 GPR151Q8TDV0 419 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 TM9SF4Q92544 642 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 GTF2H4Q92759 462 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 MYDGFQ969H8 173 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 ISOC2Q96AB3 205 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 ZBED6CLQ96FA7 236 aaPredicted RBP2.74□□□□□ -1.97
ZNF561-216ENST00000483768 JSRP1Q96MG2 331 aaPredicted RBP2.74□□□□□ -1.97
ZNF561-216ENST00000483768 FAM218AQ96MZ4 157 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 OPALINQ96PE5 141 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 XPO6Q96QU8 1125 aaKnown RBP2.74□□□□□ -1.97
ZNF561-216ENST00000483768 C7orf50Q9BRJ6 194 aaKnown RBP2.74□□□□□ -1.97
ZNF561-216ENST00000483768 MED10Q9BTT4 135 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 OSBPL10Q9BXB5 764 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 MAP1LC3CQ9BXW4 147 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 TRIM4Q9C037 500 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 ACTR3CQ9C0K3 210 aaPredicted RBP2.74□□□□□ -1.97
ZNF561-216ENST00000483768 NAA50Q9GZZ1 169 aaKnown RBP2.74□□□□□ -1.97
ZNF561-216ENST00000483768 RBM38Q9H0Z9 239 aaKnown RBP2.74□□□□□ -1.97
ZNF561-216ENST00000483768 PIGUQ9H490 435 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 NHEJ1Q9H9Q4 299 aaPredicted RBP2.74□□□□□ -1.97
ZNF561-216ENST00000483768 UCK1Q9HA47 277 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 DMAP1Q9NPF5 467 aaPredicted RBP2.74□□□□□ -1.97
ZNF561-216ENST00000483768 STMN3Q9NZ72 180 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 DCDC2Q9UHG0 476 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 MRM2Q9UI43 246 aaKnown RBP2.74□□□□□ -1.97
ZNF561-216ENST00000483768 FAF1Q9UNN5 650 aaPredicted RBP2.74□□□□□ -1.97
ZNF561-216ENST00000483768 KCNIP3Q9Y2W7 256 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 HS3ST3B1Q9Y662 390 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 TEX15Q9BXT5 2789 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 PLIN4Q96Q06 1357 aa2.74□□□□□ -1.97
ZNF561-216ENST00000483768 ANKRD17O75179 2603 aaKnown RBP2.73□□□□□ -1.97
ZNF561-216ENST00000483768 NRCAMQ92823 1304 aa2.73□□□□□ -1.97
ZNF561-216ENST00000483768 IGSF9BQ9UPX0 1349 aa2.73□□□□□ -1.97
ZNF561-216ENST00000483768 A0A1W2PRD5 423 aa2.73□□□□□ -1.97
ZNF561-216ENST00000483768 CCDC182A6NF36 153 aa2.73□□□□□ -1.97
ZNF561-216ENST00000483768 SIRPB1O00241 398 aa2.73□□□□□ -1.97
ZNF561-216ENST00000483768 CCL16O15467 120 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms