RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 CARD17Q5XLA6 110 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 RPUSD3Q6P087 351 aaKnown RBP8.97□□□□□ -0.97
HDAC6-226ENST00000483656 LRFN4Q6PJG9 635 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 C19orf48Q6RUI8 117 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 ZNF322Q6U7Q0 402 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-226ENST00000483656 LRRC69Q6ZNQ3 347 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 FCRLAQ7L513 359 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 SLC16A9Q7RTY1 509 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 CDC20BQ86Y33 519 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 TMEM123Q8N131 208 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 KLHL36Q8N4N3 616 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 NOXO1Q8NFA2 376 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 OR2T27Q8NH04 317 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 OR52N1Q8NH53 320 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 SPRYD4Q8WW59 207 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-226ENST00000483656 GATAD2BQ8WXI9 593 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 TMEM54Q969K7 222 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 CPNE4Q96A23 557 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-226ENST00000483656 ZNF775Q96BV0 537 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-226ENST00000483656 ADAD1Q96M93 576 aaKnown RBP8.97□□□□□ -0.97
HDAC6-226ENST00000483656 OR2M2Q96R28 347 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 DOK1Q99704 481 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 ARHGAP9Q9BRR9 750 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 ALG8Q9BVK2 526 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 LDAHQ9H6V9 325 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 WDR76Q9H967 626 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 TIGARQ9NQ88 270 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 PLSCR2Q9NRY7 297 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 CHCHD3Q9NX63 227 aaKnown RBP8.97□□□□□ -0.97
HDAC6-226ENST00000483656 ZMIZ1Q9ULJ6 1067 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 TP53TG5Q9Y2B4 290 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 CAB39Q9Y376 341 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-226ENST00000483656 FLVCR1Q9Y5Y0 555 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 PTPRQQ9UMZ3 2332 aa8.97□□□□□ -0.97
HDAC6-226ENST00000483656 IGKV3D-15A0A087WSY6 115 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 ZNF726A6NNF4 738 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 NPIPA2E9PIF3 369 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 NPIPA3F8WFD2 350 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 AQP7O14520 342 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 MAGEB4O15481 346 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-226ENST00000483656 ZNHIT1O43257 154 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 KHDRBS3O75525 346 aaKnown RBP8.96□□□□□ -0.98
HDAC6-226ENST00000483656 AQP8O94778 261 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 IGHG1P01857 330 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 HSMCR30P0CW71 290 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 CD36P16671 472 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 RPS27P42677 84 aaKnown RBP8.96□□□□□ -0.98
HDAC6-226ENST00000483656 RGS6P49758 472 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 SELENOPP49908 381 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 ZNF133P52736 654 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-226ENST00000483656 UCNP55089 124 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 RPS3AP61247 264 aaKnown RBP8.96□□□□□ -0.98
HDAC6-226ENST00000483656 ACTC1P68032 377 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 ACTA1P68133 377 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 RASGEF1BQ0VAM2 473 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 MLLT11Q13015 90 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-226ENST00000483656 TSTQ16762 297 aaKnown RBP8.96□□□□□ -0.98
HDAC6-226ENST00000483656 LINC00303Q3SY05 128 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 THEM4Q5T1C6 240 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 ZNF684Q5T5D7 378 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 ATCAYQ86WG3 371 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 ANKRD13BQ86YJ7 626 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 ERI1Q8IV48 349 aaKnown RBP8.96□□□□□ -0.98
HDAC6-226ENST00000483656 C20orf196Q8IYI0 205 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 SLC26A10Q8NG04 563 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 RNF128Q8TEB7 428 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 ABHD3Q8WU67 409 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 MCHR2Q969V1 340 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 ISOC1Q96CN7 298 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 RBP7Q96R05 134 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 INTS14Q96SY0 518 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 TTTY10Q9BZA0 68 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 YIPF3Q9GZM5 350 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 EXO5Q9H790 373 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 ISYNA1Q9NPH2 558 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 RSL24D1Q9UHA3 163 aaKnown RBP8.96□□□□□ -0.98
HDAC6-226ENST00000483656 ENPP5Q9UJA9 477 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 FOXD3Q9UJU5 478 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-226ENST00000483656 UGT2A1Q9Y4X1 527 aa8.96□□□□□ -0.98
HDAC6-226ENST00000483656 SIRT4Q9Y6E7 314 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-226ENST00000483656 DNAJC13O75165 2243 aa8.95□□□□□ -0.98
HDAC6-226ENST00000483656 CCDC160A6NGH7 325 aa8.95□□□□□ -0.98
HDAC6-226ENST00000483656 TRIM64BA6NI03 449 aa8.95□□□□□ -0.98
HDAC6-226ENST00000483656 CENPBD1B2RD01 187 aa8.95□□□□□ -0.98
HDAC6-226ENST00000483656 E9PI62 339 aa8.95□□□□□ -0.98
HDAC6-226ENST00000483656 H3BMQ9 156 aa8.95□□□□□ -0.98
HDAC6-226ENST00000483656 ZNF701M0R085 212 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-226ENST00000483656 ZNF593O00488 134 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-226ENST00000483656 LRRTM2O43300 516 aa8.95□□□□□ -0.98
HDAC6-226ENST00000483656 GABARAPO95166 117 aa8.95□□□□□ -0.98
HDAC6-226ENST00000483656 ATE1O95260 518 aa8.95□□□□□ -0.98
HDAC6-226ENST00000483656 SYNGR4O95473 234 aa8.95□□□□□ -0.98
HDAC6-226ENST00000483656 QDPRP09417 244 aa8.95□□□□□ -0.98
HDAC6-226ENST00000483656 ALOX5APP20292 161 aa8.95□□□□□ -0.98
HDAC6-226ENST00000483656 NR4A1P22736 598 aa8.95□□□□□ -0.98
HDAC6-226ENST00000483656 GADD45AP24522 165 aa8.95□□□□□ -0.98
HDAC6-226ENST00000483656 CENPAP49450 140 aa8.95□□□□□ -0.98
HDAC6-226ENST00000483656 BLVRAP53004 296 aa8.95□□□□□ -0.98
HDAC6-226ENST00000483656 TMBIM6P55061 237 aa8.95□□□□□ -0.98
HDAC6-226ENST00000483656 OR12D2P58182 307 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms