RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 SLC36A2Q495M3 483 aa12.55□□□□□ -0.4
HDAC6-224ENST00000481929 ZMAT1Q5H9K5 638 aa12.55□□□□□ -0.4
HDAC6-224ENST00000481929 SPATA46Q5T0L3 261 aa12.55□□□□□ -0.4
HDAC6-224ENST00000481929 KPRPQ5T749 579 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-224ENST00000481929 BRD3OSQ6XYD6 125 aa12.55□□□□□ -0.4
HDAC6-224ENST00000481929 ZNF620Q6ZNG0 422 aa12.55□□□□□ -0.4
HDAC6-224ENST00000481929 ZNF621Q6ZSS3 439 aa12.55□□□□□ -0.4
HDAC6-224ENST00000481929 LRRC28Q86X40 367 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-224ENST00000481929 C4orf33Q8N1A6 199 aa12.55□□□□□ -0.4
HDAC6-224ENST00000481929 SCAIQ8N9R8 606 aa12.55□□□□□ -0.4
HDAC6-224ENST00000481929 LINC01006Q8NI28 216 aa12.55□□□□□ -0.4
HDAC6-224ENST00000481929 MRAPQ8TCY5 172 aa12.55□□□□□ -0.4
HDAC6-224ENST00000481929 PANX1Q96RD7 426 aa12.55□□□□□ -0.4
HDAC6-224ENST00000481929 CGGBP1Q9UFW8 167 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-224ENST00000481929 ZDHHC8Q9ULC8 765 aa12.55□□□□□ -0.4
HDAC6-224ENST00000481929 CHST2Q9Y4C5 530 aa12.55□□□□□ -0.4
HDAC6-224ENST00000481929 IGKV1D-42A0A075B6H8 117 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 C5orf63A6NC05 138 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 E9PBE3 544 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 CSF1P09603 554 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 CCNOP22674 350 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 SERPINB5P36952 375 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 BIDP55957 195 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 PROK1P58294 105 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 TNFAIP6P98066 277 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-224ENST00000481929 PDCD4Q53EL6 469 aaKnown RBP12.54□□□□□ -0.4
HDAC6-224ENST00000481929 SPRNQ5BIV9 151 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 RPS26P11Q5JNZ5 115 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-224ENST00000481929 THEM4Q5T1C6 240 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 NHLRC1Q6VVB1 395 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 Q6YL49 198 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 WDR88Q6ZMY6 472 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 SLC16A14Q7RTX9 510 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 PXKQ7Z7A4 578 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 RBM15BQ8NDT2 890 aaKnown RBP12.54□□□□□ -0.4
HDAC6-224ENST00000481929 OR4K5Q8NGD3 323 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 OR6S1Q8NH40 331 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 TMEM54Q969K7 222 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 SLC35B4Q969S0 331 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 THOC1Q96FV9 657 aaKnown RBP12.54□□□□□ -0.4
HDAC6-224ENST00000481929 SSBP3Q9BWW4 388 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-224ENST00000481929 SLC19A3Q9BZV2 496 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 GLTPQ9NZD2 209 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 KLHL21Q9UJP4 597 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 TRIM33Q9UPN9 1127 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 IFT52Q9Y366 437 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 POMT1Q9Y6A1 747 aa12.54□□□□□ -0.4
HDAC6-224ENST00000481929 IGHV2-70DA0A0C4DH43 119 aa12.53□□□□□ -0.4
HDAC6-224ENST00000481929 KRT75O95678 551 aa12.53□□□□□ -0.4
HDAC6-224ENST00000481929 AHCYP23526 432 aa12.53□□□□□ -0.4
HDAC6-224ENST00000481929 PAX2Q02962 417 aa12.53□□□□□ -0.4
HDAC6-224ENST00000481929 HSF2Q03933 536 aa12.53□□□□□ -0.4
HDAC6-224ENST00000481929 ZMYND11Q15326 602 aa12.53□□□□□ -0.4
HDAC6-224ENST00000481929 TMEM255AQ5JRV8 349 aa12.53□□□□□ -0.4
HDAC6-224ENST00000481929 GPR157Q5UAW9 335 aa12.53□□□□□ -0.4
HDAC6-224ENST00000481929 MBNL2Q5VZF2 373 aaKnown RBP12.53□□□□□ -0.4
HDAC6-224ENST00000481929 UNQ6126/PRO20091Q6UXV3 157 aa12.53□□□□□ -0.4
HDAC6-224ENST00000481929 POU5F2Q8N7G0 328 aa12.53□□□□□ -0.4
HDAC6-224ENST00000481929 ZNF283Q8N7M2 679 aa12.53□□□□□ -0.4
HDAC6-224ENST00000481929 SLC47A1Q96FL8 570 aa12.53□□□□□ -0.4
HDAC6-224ENST00000481929 MARS2Q96GW9 593 aaKnown RBP12.53□□□□□ -0.4
HDAC6-224ENST00000481929 FAM71F1Q96KD3 344 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-224ENST00000481929 PPP1R36Q96LQ0 422 aa12.53□□□□□ -0.4
HDAC6-224ENST00000481929 ZIM3Q96PE6 472 aa12.53□□□□□ -0.4
HDAC6-224ENST00000481929 EPYCQ99645 322 aa12.53□□□□□ -0.4
HDAC6-224ENST00000481929 AKTIPQ9H8T0 292 aa12.53□□□□□ -0.4
HDAC6-224ENST00000481929 MRPL39Q9NYK5 338 aaKnown RBP12.53□□□□□ -0.4
HDAC6-224ENST00000481929 EIF3KQ9UBQ5 218 aaKnown RBP12.53□□□□□ -0.4
HDAC6-224ENST00000481929 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-224ENST00000481929 A0A1B0GWA3 101 aa12.52□□□□□ -0.41
HDAC6-224ENST00000481929 SMIM23A6NLE4 172 aa12.52□□□□□ -0.41
HDAC6-224ENST00000481929 DHHO43323 396 aa12.52□□□□□ -0.41
HDAC6-224ENST00000481929 BGLAPP02818 100 aa12.52□□□□□ -0.41
HDAC6-224ENST00000481929 MELTFP08582 738 aa12.52□□□□□ -0.41
HDAC6-224ENST00000481929 MDH2P40926 338 aaKnown RBP12.52□□□□□ -0.41
HDAC6-224ENST00000481929 CDKN2CP42773 168 aa12.52□□□□□ -0.41
HDAC6-224ENST00000481929 BPIFB3P59826 476 aa12.52□□□□□ -0.41
HDAC6-224ENST00000481929 ALG10BQ5I7T1 473 aa12.52□□□□□ -0.41
HDAC6-224ENST00000481929 VAX1Q5SQQ9 334 aa12.52□□□□□ -0.41
HDAC6-224ENST00000481929 SAMD5Q5TGI4 173 aa12.52□□□□□ -0.41
HDAC6-224ENST00000481929 ZNF101Q8IZC7 436 aa12.52□□□□□ -0.41
HDAC6-224ENST00000481929 MUC20Q8N307 709 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-224ENST00000481929 C10orf53Q8N6V4 93 aa12.52□□□□□ -0.41
HDAC6-224ENST00000481929 OR6X1Q8NH79 312 aa12.52□□□□□ -0.41
HDAC6-224ENST00000481929 SLC25A40Q8TBP6 338 aa12.52□□□□□ -0.41
HDAC6-224ENST00000481929 KLF14Q8TD94 323 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-224ENST00000481929 SLC38A5Q8WUX1 472 aa12.52□□□□□ -0.41
HDAC6-224ENST00000481929 DNAJA4Q8WW22 397 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-224ENST00000481929 SSMEM1Q8WWF3 244 aa12.52□□□□□ -0.41
HDAC6-224ENST00000481929 RAB40AQ8WXH6 277 aa12.52□□□□□ -0.41
HDAC6-224ENST00000481929 DYRK2Q92630 601 aa12.52□□□□□ -0.41
HDAC6-224ENST00000481929 ARHGDIGQ99819 225 aa12.52□□□□□ -0.41
HDAC6-224ENST00000481929 MSL2Q9HCI7 577 aa12.52□□□□□ -0.41
HDAC6-224ENST00000481929 A4GALTQ9NPC4 353 aa12.52□□□□□ -0.41
HDAC6-224ENST00000481929 A0A0G2JPF8 293 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 TMEM247A6NEH6 219 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 CEACAM18A8MTB9 384 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 HNRNPCL2B2RXH8 293 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 HNRNPCL3B7ZW38 293 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 C11orf98E9PRG8 122 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms