RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 SDC4P31431 198 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 RBMXP38159 391 aaKnown RBP2.66□□□□□ -1.98
CBX3-207ENST00000481300 TUFMP49411 452 aaKnown RBP2.66□□□□□ -1.98
CBX3-207ENST00000481300 CAV2P51636 162 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 HNRNPA3P51991 378 aaKnown RBP2.66□□□□□ -1.98
CBX3-207ENST00000481300 WNT4P56705 351 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 RWDD2BP57060 319 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 DAOAP59103 153 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 RPL10AP62906 217 aaKnown RBP2.66□□□□□ -1.98
CBX3-207ENST00000481300 OGDHQ02218 1023 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 CKAP4Q07065 602 aaKnown RBP2.66□□□□□ -1.98
CBX3-207ENST00000481300 ADIGQ0VDE8 80 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 ARFRP1Q13795 201 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 PIGHQ14442 188 aaPredicted RBP2.66□□□□□ -1.98
CBX3-207ENST00000481300 GANABQ14697 944 aaKnown RBP2.66□□□□□ -1.98
CBX3-207ENST00000481300 SHHQ15465 462 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 PSMD5Q16401 504 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 HADHQ16836 314 aaKnown RBP2.66□□□□□ -1.98
CBX3-207ENST00000481300 SLC25A52Q3SY17 297 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 CCDC14Q49A88 953 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 TP53I3Q53FA7 332 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 CFAP157Q5JU67 520 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 SDHAF4Q5VUM1 108 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 TPGS2Q68CL5 300 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 SLC8B1Q6J4K2 584 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 UNQ9370/PRO34162Q6UXP9 181 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 CTAGE6Q86UF2 777 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 NT5DC3Q86UY8 548 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 ARHGAP18Q8N392 663 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 CEP112Q8N8E3 955 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 ANKFN1Q8N957 763 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 OR52I1Q8NGK6 324 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 JOSD2Q8TAC2 188 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 SPPL2BQ8TCT7 592 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 RNF139Q8WU17 664 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 C2orf15Q8WU43 125 aaKnown RBP2.66□□□□□ -1.98
CBX3-207ENST00000481300 DNAJA4Q8WW22 397 aaPredicted RBP2.66□□□□□ -1.98
CBX3-207ENST00000481300 RXFP2Q8WXD0 754 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 OR1E3Q8WZA6 343 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 DCUN1D4Q92564 292 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 NDRG1Q92597 394 aaKnown RBP2.66□□□□□ -1.98
CBX3-207ENST00000481300 PELI1Q96FA3 418 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 CAPZA3Q96KX2 299 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 PGLYRP4Q96LB8 373 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 NIPSNAP3BQ9BS92 247 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 TRIM62Q9BVG3 475 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 POLR2J2Q9GZM3 115 aaKnown RBP2.66□□□□□ -1.98
CBX3-207ENST00000481300 MAGT1Q9H0U3 335 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 POLR2J3Q9H1A7 115 aaKnown RBP2.66□□□□□ -1.98
CBX3-207ENST00000481300 OR51J1Q9H342 316 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 CSNK1G1Q9HCP0 422 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 SH2D2AQ9NP31 389 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 ABCB10Q9NRK6 738 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 ANAPC11Q9NYG5 84 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 TREM2Q9NZC2 230 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 IL36GQ9NZH8 169 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 PACSIN2Q9UNF0 486 aaPredicted RBP2.66□□□□□ -1.98
CBX3-207ENST00000481300 COPS3Q9UNS2 423 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.66□□□□□ -1.98
CBX3-207ENST00000481300 LCTP09848 1927 aa2.66□□□□□ -1.98
CBX3-207ENST00000481300 COL11A1P12107 1806 aaPredicted RBP2.65□□□□□ -1.98
CBX3-207ENST00000481300 PARP14Q460N5 1801 aa2.65□□□□□ -1.98
CBX3-207ENST00000481300 SYNJ2BP-COX16A0A087WUM0 186 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 A0A0J9YXY3 114 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 LRP5LA4QPB2 252 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 VSTM2BA6NLU5 285 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 TRDCB7Z8K6 153 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 PGRMC1O00264 195 aaKnown RBP2.65□□□□□ -1.99
CBX3-207ENST00000481300 TAPBPO15533 448 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 PSTPIP1O43586 416 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 CXCL13O43927 109 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 SCGNO76038 276 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 SNAPINO95295 136 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 FGGP02679 453 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 POLR2EP19388 210 aaKnown RBP2.65□□□□□ -1.99
CBX3-207ENST00000481300 ELK1P19419 428 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 HNF1AP20823 631 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 FUT3P21217 361 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 MIPP30301 263 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 PCK1P35558 622 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 P2RY1P47900 373 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 MARCKSL1P49006 195 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 SULT1E1P49888 294 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 YWHAGP61981 247 aaKnown RBP eCLIP2.65□□□□□ -1.99
CBX3-207ENST00000481300 CSNK1G2P78368 415 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 TLE4Q04727 773 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 HERPUD1Q15011 391 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 KRTAP13-3Q3SY46 172 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 BOLA3Q53S33 107 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 C2orf83Q53S99 150 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 SYPL2Q5VXT5 272 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 ACOT7LQ6ZUV0 252 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 GDPD3Q7L5L3 318 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 FAM220AQ7Z4H9 259 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 SCD5Q86SK9 330 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 SLC35F2Q8IXU6 374 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 KATNAL2Q8IYT4 538 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 DEFB106AQ8N104 65 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 OR4D9Q8NGE8 314 aa2.65□□□□□ -1.99
CBX3-207ENST00000481300 OR4D5Q8NGN0 318 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms