RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 USF2Q15853 346 aaPredicted RBP4.07□□□□□ -1.76
COPA-203ENST00000481040 PSMD5Q16401 504 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 C18orf21Q32NC0 220 aaPredicted RBP4.07□□□□□ -1.76
COPA-203ENST00000481040 KRTAP24-1Q3LI83 254 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 DUX4L9Q6RFH8 374 aaPredicted RBP4.07□□□□□ -1.76
COPA-203ENST00000481040 TMIGD1Q6UXZ0 262 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 SLC35D2Q76EJ3 337 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 NDUFAF7Q7L592 441 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 COPS6Q7L5N1 327 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 TMEM135Q86UB9 458 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 KIR2DL5AQ8N109 375 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 KIR2DL5BQ8NHK3 375 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 ACOT11Q8WXI4 607 aaPredicted RBP4.07□□□□□ -1.76
COPA-203ENST00000481040 FRAT1Q92837 279 aaPredicted RBP4.07□□□□□ -1.76
COPA-203ENST00000481040 GLT1D1Q96MS3 346 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 TRIM51Q9BSJ1 452 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 HES7Q9BYE0 225 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 NAA50Q9GZZ1 169 aaKnown RBP4.07□□□□□ -1.76
COPA-203ENST00000481040 NXF3Q9H4D5 531 aaKnown RBP4.07□□□□□ -1.76
COPA-203ENST00000481040 IL26Q9NPH9 171 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 CLEC5AQ9NY25 188 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 DUX4Q9UBX2 424 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 UGT2A1Q9Y4X1 527 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 FLVCR1Q9Y5Y0 555 aa4.07□□□□□ -1.76
COPA-203ENST00000481040 MSH6P52701 1360 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 ZNF816-ZNF321PA0A0X1KG74 233 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 TSPAN11A1L157 253 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 SLC22A20A6NK97 555 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 LYRM9A8MSI8 78 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 PLPP1O14494 284 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 XRCC2O43543 280 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 LSM8O95777 96 aaKnown RBP4.06□□□□□ -1.76
COPA-203ENST00000481040 HBE1P02100 147 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 SLC26A3P40879 764 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 RFC3P40938 356 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 CSKP41240 450 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 BTDP43251 543 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 CRIP2P52943 208 aaPredicted RBP4.06□□□□□ -1.76
COPA-203ENST00000481040 SLC25A1P53007 311 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 SUB1P53999 127 aaKnown RBP eCLIP4.06□□□□□ -1.76
COPA-203ENST00000481040 SP4Q02446 784 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 TGFBR3Q03167 851 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 ZNF763Q0D2J5 394 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 ANGPT1Q15389 498 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 ATP6AP1Q15904 470 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 C1orf146Q5VVC0 180 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 ZNF343Q6P1L6 599 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 CNIH2Q6PI25 160 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 LINC00336Q6ZUF6 198 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 PID1Q7Z2X4 250 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 CDC20BQ86Y33 519 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 ZNF547Q8IVP9 402 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 TMEM54Q969K7 222 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 RIOK2Q9BVS4 552 aaKnown RBP4.06□□□□□ -1.76
COPA-203ENST00000481040 KIR3DX1Q9H7L2 352 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 EML4Q9HC35 981 aaKnown RBP4.06□□□□□ -1.76
COPA-203ENST00000481040 CD209Q9NNX6 404 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 ZNF581Q9P0T4 197 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 CD300AQ9UGN4 299 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 ZNF229Q9UJW7 825 aa4.06□□□□□ -1.76
COPA-203ENST00000481040 IGLV8-61A0A075B6I0 122 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 A0A1W2PPR1 153 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 NDUFAF8A1L188 74 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 C12orf77C9JDV5 145 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 PRSS44E7EML9 344 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 F6UB75 175 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 RFXANKO14593 260 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 ENTPD5O75356 428 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 LYPLA1O75608 230 aaPredicted RBP4.05□□□□□ -1.76
COPA-203ENST00000481040 KLK1P06870 262 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 VDAC2P45880 294 aaPredicted RBP4.05□□□□□ -1.76
COPA-203ENST00000481040 RORCP51449 518 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 CCR8P51685 355 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 MAP3K7CLP57077 242 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 MS4A2Q01362 244 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 SLC25A11Q02978 314 aaKnown RBP4.05□□□□□ -1.76
COPA-203ENST00000481040 TPRG1LQ5T0D9 272 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 ADNP2Q6IQ32 1131 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 OR51S1Q8NGJ8 323 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 CLHC1Q8NHS4 586 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 SUN5Q8TC36 379 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 ACBD6Q9BR61 282 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 OSBPL10Q9BXB5 764 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 MAP1LC3CQ9BXW4 147 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 OR51J1Q9H342 316 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 TMEM38AQ9H6F2 299 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 PATZ1Q9HBE1 687 aaKnown RBP4.05□□□□□ -1.76
COPA-203ENST00000481040 CLN6Q9NWW5 311 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 QPCTLQ9NXS2 382 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 MOB4Q9Y3A3 225 aa4.05□□□□□ -1.76
COPA-203ENST00000481040 GOLGA8QA0A0J9YX86 632 aa4.04□□□□□ -1.76
COPA-203ENST00000481040 A0A1W2PRF3 423 aa4.04□□□□□ -1.76
COPA-203ENST00000481040 A0A1W2PRM7 423 aa4.04□□□□□ -1.76
COPA-203ENST00000481040 ZNF726A6NNF4 738 aa4.04□□□□□ -1.76
COPA-203ENST00000481040 AGPAT2O15120 278 aa4.04□□□□□ -1.76
COPA-203ENST00000481040 ZG16O60844 167 aa4.04□□□□□ -1.76
COPA-203ENST00000481040 SEMG1P04279 462 aa4.04□□□□□ -1.76
COPA-203ENST00000481040 CCDC166P0CW27 439 aa4.04□□□□□ -1.76
COPA-203ENST00000481040 FOLR1P15328 257 aa4.04□□□□□ -1.76
COPA-203ENST00000481040 KCNJ3P48549 501 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms