RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 SLC36A3Q495N2 470 aa17.27■□□□□ 0.36
LIME1-205ENST00000480139 BEX5Q5H9J7 111 aa17.27■□□□□ 0.36
LIME1-205ENST00000480139 ZNF813Q6ZN06 617 aa17.27■□□□□ 0.36
LIME1-205ENST00000480139 PTCHD4Q6ZW05 846 aa17.27■□□□□ 0.36
LIME1-205ENST00000480139 WFDC8Q8IUA0 241 aa17.27■□□□□ 0.36
LIME1-205ENST00000480139 OR52N5Q8NH56 324 aa17.27■□□□□ 0.36
LIME1-205ENST00000480139 PAPOLBQ9NRJ5 636 aaKnown RBP17.27■□□□□ 0.36
LIME1-205ENST00000480139 OAZ3Q9UMX2 235 aa17.27■□□□□ 0.36
LIME1-205ENST00000480139 UGT2A1Q9Y4X1 527 aa17.27■□□□□ 0.36
LIME1-205ENST00000480139 A0A096LPE4 126 aa17.26■□□□□ 0.35
LIME1-205ENST00000480139 A0A1W2PPZ6 126 aa17.26■□□□□ 0.35
LIME1-205ENST00000480139 H3BN98 237 aa17.26■□□□□ 0.35
LIME1-205ENST00000480139 IGFBP1P08833 259 aaPredicted RBP17.26■□□□□ 0.35
LIME1-205ENST00000480139 HIST1H1CP16403 213 aaKnown RBP17.26■□□□□ 0.35
LIME1-205ENST00000480139 CDKN2AP42771 156 aaKnown RBP17.26■□□□□ 0.35
LIME1-205ENST00000480139 NR1H2P55055 460 aa17.26■□□□□ 0.35
LIME1-205ENST00000480139 MRPS34P82930 218 aaKnown RBP17.26■□□□□ 0.35
LIME1-205ENST00000480139 TLE4Q04727 773 aa17.26■□□□□ 0.35
LIME1-205ENST00000480139 KDM4DQ6B0I6 523 aa17.26■□□□□ 0.35
LIME1-205ENST00000480139 FOXL2NBQ6ZUU3 175 aa17.26■□□□□ 0.35
LIME1-205ENST00000480139 JAZF1Q86VZ6 243 aa17.26■□□□□ 0.35
LIME1-205ENST00000480139 FAM169BQ8N8A8 192 aa17.26■□□□□ 0.35
LIME1-205ENST00000480139 RASSF1Q9NS23 344 aa17.26■□□□□ 0.35
LIME1-205ENST00000480139 NBPF19A0A087WUL8 3843 aa17.26■□□□□ 0.35
LIME1-205ENST00000480139 IGKV1D-43A0A0B4J1Z2 117 aa17.25■□□□□ 0.35
LIME1-205ENST00000480139 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.25■□□□□ 0.35
LIME1-205ENST00000480139 ANKRD65E5RJM6 399 aa17.25■□□□□ 0.35
LIME1-205ENST00000480139 H7C1C5 153 aa17.25■□□□□ 0.35
LIME1-205ENST00000480139 SIAH2O43255 324 aa17.25■□□□□ 0.35
LIME1-205ENST00000480139 SEC14L2O76054 403 aa17.25■□□□□ 0.35
LIME1-205ENST00000480139 HRGP04196 525 aa17.25■□□□□ 0.35
LIME1-205ENST00000480139 OR8G3PP0DMU2 310 aa17.25■□□□□ 0.35
LIME1-205ENST00000480139 B4GALT1P15291 398 aa17.25■□□□□ 0.35
LIME1-205ENST00000480139 NPR2P20594 1047 aa17.25■□□□□ 0.35
LIME1-205ENST00000480139 LCN6P62502 163 aa17.25■□□□□ 0.35
LIME1-205ENST00000480139 C3orf36Q3SXR2 165 aa17.25■□□□□ 0.35
LIME1-205ENST00000480139 SLC27A4Q6P1M0 643 aa17.25■□□□□ 0.35
LIME1-205ENST00000480139 PQLC1Q8N2U9 271 aa17.25■□□□□ 0.35
LIME1-205ENST00000480139 SLC22A24Q8N4F4 322 aa17.25■□□□□ 0.35
LIME1-205ENST00000480139 OR4Q3Q8NH05 313 aa17.25■□□□□ 0.35
LIME1-205ENST00000480139 NANOS1Q8WY41 292 aaKnown RBP17.25■□□□□ 0.35
LIME1-205ENST00000480139 SYT4Q9H2B2 425 aa17.25■□□□□ 0.35
LIME1-205ENST00000480139 ESRP2Q9H6T0 727 aaKnown RBP17.25■□□□□ 0.35
LIME1-205ENST00000480139 NPAP1Q9NZP6 1156 aa17.25■□□□□ 0.35
LIME1-205ENST00000480139 CRNNQ9UBG3 495 aaPredicted RBP17.25■□□□□ 0.35
LIME1-205ENST00000480139 ENOPH1Q9UHY7 261 aa17.25■□□□□ 0.35
LIME1-205ENST00000480139 DCHS2Q6V1P9 2916 aa17.25■□□□□ 0.35
LIME1-205ENST00000480139 A0A1W2PR80 420 aa17.24■□□□□ 0.35
LIME1-205ENST00000480139 FARS2O95363 451 aaKnown RBP17.24■□□□□ 0.35
LIME1-205ENST00000480139 RENP00797 406 aa17.24■□□□□ 0.35
LIME1-205ENST00000480139 PRF1P14222 555 aa17.24■□□□□ 0.35
LIME1-205ENST00000480139 LOXP28300 417 aaPredicted RBP17.24■□□□□ 0.35
LIME1-205ENST00000480139 CRABP1P29762 137 aa17.24■□□□□ 0.35
LIME1-205ENST00000480139 GRK5P34947 590 aa17.24■□□□□ 0.35
LIME1-205ENST00000480139 ESRRGP62508 458 aa17.24■□□□□ 0.35
LIME1-205ENST00000480139 PPP2R2BQ00005 443 aa17.24■□□□□ 0.35
LIME1-205ENST00000480139 PGGHGQ32M88 737 aa17.24■□□□□ 0.35
LIME1-205ENST00000480139 LEG1Q6P5S2 330 aa17.24■□□□□ 0.35
LIME1-205ENST00000480139 DNM1P34Q6PK57 102 aa17.24■□□□□ 0.35
LIME1-205ENST00000480139 DPPA2Q7Z7J5 298 aa17.24■□□□□ 0.35
LIME1-205ENST00000480139 ICA1LQ8NDH6 482 aa17.24■□□□□ 0.35
LIME1-205ENST00000480139 OR4K13Q8NH42 304 aa17.24■□□□□ 0.35
LIME1-205ENST00000480139 NABP1Q96AH0 204 aa17.24■□□□□ 0.35
LIME1-205ENST00000480139 NMNAT3Q96T66 252 aa17.24■□□□□ 0.35
LIME1-205ENST00000480139 SIAEQ9HAT2 523 aa17.24■□□□□ 0.35
LIME1-205ENST00000480139 KRT84Q9NSB2 600 aa17.24■□□□□ 0.35
LIME1-205ENST00000480139 KLHL21Q9UJP4 597 aa17.24■□□□□ 0.35
LIME1-205ENST00000480139 PRR14LQ5THK1 2151 aa17.23■□□□□ 0.35
LIME1-205ENST00000480139 SAC3D1A6NKF1 404 aa17.23■□□□□ 0.35
LIME1-205ENST00000480139 UBL3O95164 117 aa17.23■□□□□ 0.35
LIME1-205ENST00000480139 CTLA4P16410 223 aa17.23■□□□□ 0.35
LIME1-205ENST00000480139 GIPRP48546 466 aa17.23■□□□□ 0.35
LIME1-205ENST00000480139 CDK5Q00535 292 aa17.23■□□□□ 0.35
LIME1-205ENST00000480139 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.23■□□□□ 0.35
LIME1-205ENST00000480139 ZNF362Q5T0B9 420 aaPredicted RBP17.23■□□□□ 0.35
LIME1-205ENST00000480139 SLC35F1Q5T1Q4 408 aa17.23■□□□□ 0.35
LIME1-205ENST00000480139 NCMAPQ5T1S8 102 aa17.23■□□□□ 0.35
LIME1-205ENST00000480139 TMEM108Q6UXF1 575 aa17.23■□□□□ 0.35
LIME1-205ENST00000480139 NPEPL1Q8NDH3 523 aa17.23■□□□□ 0.35
LIME1-205ENST00000480139 SDR9C7Q8NEX9 313 aa17.23■□□□□ 0.35
LIME1-205ENST00000480139 OR52E2Q8NGJ4 325 aa17.23■□□□□ 0.35
LIME1-205ENST00000480139 NSMAFQ92636 917 aa17.23■□□□□ 0.35
LIME1-205ENST00000480139 PLPPR2Q96GM1 343 aa17.23■□□□□ 0.35
LIME1-205ENST00000480139 DDOQ99489 341 aa17.23■□□□□ 0.35
LIME1-205ENST00000480139 RBM4BQ9BQ04 359 aaKnown RBP17.23■□□□□ 0.35
LIME1-205ENST00000480139 RBM4Q9BWF3 364 aaKnown RBP17.23■□□□□ 0.35
LIME1-205ENST00000480139 NUAK2Q9H093 628 aa17.23■□□□□ 0.35
LIME1-205ENST00000480139 SLC25A19Q9HC21 320 aa17.23■□□□□ 0.35
LIME1-205ENST00000480139 B3GNT2Q9NY97 397 aa17.23■□□□□ 0.35
LIME1-205ENST00000480139 ZNF224Q9NZL3 707 aa17.23■□□□□ 0.35
LIME1-205ENST00000480139 TMEFF2Q9UIK5 374 aaPredicted RBP17.23■□□□□ 0.35
LIME1-205ENST00000480139 SETXQ7Z333 2677 aaKnown RBP17.23■□□□□ 0.35
LIME1-205ENST00000480139 SLC16A7O60669 478 aa17.22■□□□□ 0.35
LIME1-205ENST00000480139 KHDRBS3O75525 346 aaKnown RBP17.22■□□□□ 0.35
LIME1-205ENST00000480139 IFNGP01579 166 aa17.22■□□□□ 0.35
LIME1-205ENST00000480139 IGKV3-15P01624 115 aa17.22■□□□□ 0.35
LIME1-205ENST00000480139 CBR1P16152 277 aa17.22■□□□□ 0.35
LIME1-205ENST00000480139 ARR3P36575 388 aa17.22■□□□□ 0.35
LIME1-205ENST00000480139 GUCA1AP43080 201 aaPredicted RBP17.22■□□□□ 0.35
LIME1-205ENST00000480139 CRISP1P54107 249 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms