RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 SGCGQ13326 291 aa18.78■□□□□ 0.6
COL13A1-208ENST00000479733 RAB11BQ15907 218 aa18.78■□□□□ 0.6
COL13A1-208ENST00000479733 LINC00114Q6XXX2 140 aa18.78■□□□□ 0.6
COL13A1-208ENST00000479733 RAB11FIP2Q7L804 512 aa18.78■□□□□ 0.6
COL13A1-208ENST00000479733 THAP6Q8TBB0 222 aa18.78■□□□□ 0.6
COL13A1-208ENST00000479733 UPB1Q9UBR1 384 aa18.78■□□□□ 0.6
COL13A1-208ENST00000479733 DTX4Q9Y2E6 619 aa18.78■□□□□ 0.6
COL13A1-208ENST00000479733 SLC31A1O15431 190 aa18.78■□□□□ 0.6
COL13A1-208ENST00000479733 CENPAP49450 140 aa18.78■□□□□ 0.6
COL13A1-208ENST00000479733 CCR4P51679 360 aa18.78■□□□□ 0.6
COL13A1-208ENST00000479733 SCRN3Q0VDG4 424 aa18.78■□□□□ 0.6
COL13A1-208ENST00000479733 SLC35D2Q76EJ3 337 aa18.78■□□□□ 0.6
COL13A1-208ENST00000479733 OR5M8Q8NGP6 311 aa18.78■□□□□ 0.6
COL13A1-208ENST00000479733 CCL4L1Q8NHW4 92 aa18.78■□□□□ 0.6
COL13A1-208ENST00000479733 CASTOR1Q8WTX7 329 aa18.78■□□□□ 0.6
COL13A1-208ENST00000479733 HHIPL1Q96JK4 782 aa18.78■□□□□ 0.6
COL13A1-208ENST00000479733 MOGAT1Q96PD6 335 aa18.78■□□□□ 0.6
COL13A1-208ENST00000479733 POTEKPQ9BYX7 375 aa18.78■□□□□ 0.6
COL13A1-208ENST00000479733 LRIT1Q9P2V4 623 aa18.78■□□□□ 0.6
COL13A1-208ENST00000479733 SLC22A13Q9Y226 551 aa18.78■□□□□ 0.6
COL13A1-208ENST00000479733 COLEC10Q9Y6Z7 277 aa18.78■□□□□ 0.6
COL13A1-208ENST00000479733 DENND4AQ7Z401 1863 aa18.77■□□□□ 0.6
COL13A1-208ENST00000479733 ARPC3O15145 178 aa18.77■□□□□ 0.6
COL13A1-208ENST00000479733 CDC40O60508 579 aaKnown RBP eCLIP18.77■□□□□ 0.6
COL13A1-208ENST00000479733 SRPX2O60687 465 aaPredicted RBP18.77■□□□□ 0.6
COL13A1-208ENST00000479733 ABHD16AO95870 558 aa18.77■□□□□ 0.6
COL13A1-208ENST00000479733 AVPR2P30518 371 aa18.77■□□□□ 0.6
COL13A1-208ENST00000479733 PRAMEF17Q5VTA0 474 aa18.77■□□□□ 0.6
COL13A1-208ENST00000479733 C3orf33Q6P1S2 294 aa18.77■□□□□ 0.6
COL13A1-208ENST00000479733 PSRC1Q6PGN9 363 aaPredicted RBP18.77■□□□□ 0.6
COL13A1-208ENST00000479733 ENPP7Q6UWV6 458 aa18.77■□□□□ 0.6
COL13A1-208ENST00000479733 OR4C3Q8NH37 302 aa18.77■□□□□ 0.6
COL13A1-208ENST00000479733 NKD1Q969G9 470 aa18.77■□□□□ 0.6
COL13A1-208ENST00000479733 ZBTB8AQ96BR9 441 aa18.77■□□□□ 0.6
COL13A1-208ENST00000479733 SEH1LQ96EE3 360 aa18.77■□□□□ 0.6
COL13A1-208ENST00000479733 LRFN5Q96NI6 719 aa18.77■□□□□ 0.6
COL13A1-208ENST00000479733 RSPH9Q9H1X1 276 aaPredicted RBP18.77■□□□□ 0.6
COL13A1-208ENST00000479733 GAREM1Q9H706 876 aa18.77■□□□□ 0.6
COL13A1-208ENST00000479733 FANCFQ9NPI8 374 aa18.77■□□□□ 0.6
COL13A1-208ENST00000479733 A0A087WV62 115 aa18.77■□□□□ 0.6
COL13A1-208ENST00000479733 EEF1E1-BLOC1S5C9J1V9 151 aa18.77■□□□□ 0.6
COL13A1-208ENST00000479733 CSTAP01040 98 aa18.77■□□□□ 0.6
COL13A1-208ENST00000479733 GPR143P51810 404 aa18.77■□□□□ 0.6
COL13A1-208ENST00000479733 VITQ6UXI7 678 aa18.77■□□□□ 0.6
COL13A1-208ENST00000479733 ELF4Q99607 663 aaPredicted RBP18.77■□□□□ 0.6
COL13A1-208ENST00000479733 TLNRD1Q9H1K6 362 aa18.77■□□□□ 0.6
COL13A1-208ENST00000479733 FGF22Q9HCT0 170 aa18.77■□□□□ 0.6
COL13A1-208ENST00000479733 A0A087WUJ7 227 aa18.77■□□□□ 0.59
COL13A1-208ENST00000479733 OR2F2O95006 317 aa18.77■□□□□ 0.59
COL13A1-208ENST00000479733 GRK6P43250 576 aa18.77■□□□□ 0.59
COL13A1-208ENST00000479733 TAS2R19P59542 299 aa18.77■□□□□ 0.59
COL13A1-208ENST00000479733 OR2F1Q13607 317 aa18.77■□□□□ 0.59
COL13A1-208ENST00000479733 KCTD9Q7L273 389 aa18.77■□□□□ 0.59
COL13A1-208ENST00000479733 ZNF761Q86XN6 746 aaPredicted RBP18.77■□□□□ 0.59
COL13A1-208ENST00000479733 BPIFB2Q8N4F0 458 aa18.77■□□□□ 0.59
COL13A1-208ENST00000479733 GPX8Q8TED1 209 aa18.77■□□□□ 0.59
COL13A1-208ENST00000479733 CPNE2Q96FN4 548 aaPredicted RBP18.77■□□□□ 0.59
COL13A1-208ENST00000479733 SPACA7Q96KW9 195 aa18.77■□□□□ 0.59
COL13A1-208ENST00000479733 COA4Q9NYJ1 87 aa18.77■□□□□ 0.59
COL13A1-208ENST00000479733 CGGBP1Q9UFW8 167 aaPredicted RBP18.77■□□□□ 0.59
COL13A1-208ENST00000479733 CYB5R1Q9UHQ9 305 aa18.77■□□□□ 0.59
COL13A1-208ENST00000479733 FITM1A5D6W6 292 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 TMEM200CA6NKL6 621 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 ACTL6AO96019 429 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 AK1P00568 194 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 H3F3CQ6NXT2 135 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 NT5CQ8TCD5 201 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 C1orf198Q9H425 327 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 TRBV5-7A0A0A0MS05 114 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 NKX2-2O95096 273 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 DCNP07585 359 aaKnown RBP18.76■□□□□ 0.59
COL13A1-208ENST00000479733 SMIM10L1P0DMW3 83 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 SPP1P10451 314 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 CSF2RAP15509 400 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 MAP3K8P41279 467 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 ACTBP60709 375 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 SKP1P63208 163 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 ACTG1P63261 375 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 WDR38Q5JTN6 314 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 EXOSC6Q5RKV6 272 aaKnown RBP18.76■□□□□ 0.59
COL13A1-208ENST00000479733 ACOT7LQ6ZUV0 252 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 ABHD13Q7L211 337 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 SMIM10Q96HG1 83 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 TREM1Q9NP99 234 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 CTSFQ9UBX1 484 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 KCNK7Q9Y2U2 307 aa18.76■□□□□ 0.59
COL13A1-208ENST00000479733 LOC100289279A0A1B0GTE1 492 aa18.75■□□□□ 0.59
COL13A1-208ENST00000479733 CYB5AP00167 134 aa18.75■□□□□ 0.59
COL13A1-208ENST00000479733 HLA-DQA2P01906 255 aa18.75■□□□□ 0.59
COL13A1-208ENST00000479733 CASRP41180 1078 aa18.75■□□□□ 0.59
COL13A1-208ENST00000479733 ADPRHP54922 357 aa18.75■□□□□ 0.59
COL13A1-208ENST00000479733 SQSTM1Q13501 440 aa18.75■□□□□ 0.59
COL13A1-208ENST00000479733 GAB4Q2WGN9 574 aa18.75■□□□□ 0.59
COL13A1-208ENST00000479733 ITPRIPL2Q3MIP1 535 aa18.75■□□□□ 0.59
COL13A1-208ENST00000479733 PLEKHN1Q494U1 663 aaPredicted RBP18.75■□□□□ 0.59
COL13A1-208ENST00000479733 ALG10Q5BKT4 473 aa18.75■□□□□ 0.59
COL13A1-208ENST00000479733 ZNF550Q7Z398 422 aa18.75■□□□□ 0.59
COL13A1-208ENST00000479733 GTPBP8Q8N3Z3 284 aaPredicted RBP18.75■□□□□ 0.59
COL13A1-208ENST00000479733 SLC6A7Q99884 636 aa18.75■□□□□ 0.59
COL13A1-208ENST00000479733 UQCC2Q9BRT2 126 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms