RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 C6orf50Q9HD87 102 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 SH2D2AQ9NP31 389 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 ZNF275Q9NSD4 429 aaPredicted RBP3.64□□□□□ -1.83
CCDC171-207ENST00000478913 B4GALT7Q9UBV7 327 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 IL20RAQ9UHF4 553 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 IGHV3-35A0A0C4DH35 117 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 VGLL3A8MV65 326 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 KLLNB2CW77 178 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 PNMA6AP0CW24 399 aaPredicted RBP3.63□□□□□ -1.83
CCDC171-207ENST00000478913 ADRB3P13945 408 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 ZNF24P17028 368 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 NELFEP18615 380 aaKnown RBP3.63□□□□□ -1.83
CCDC171-207ENST00000478913 MMP11P24347 488 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 PRDX2P32119 198 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 IGLV3-21P80748 117 aaPredicted RBP3.63□□□□□ -1.83
CCDC171-207ENST00000478913 SCGB2A2Q13296 93 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 GAMTQ14353 236 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 GGTLC2Q14390 218 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 RAB35Q15286 201 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 LGSNQ5TDP6 509 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 PNCKQ6P2M8 343 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 CLEC2AQ6UVW9 174 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 KDM8Q8N371 416 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 ARFGAP2Q8N6H7 521 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 DQX1Q8TE96 717 aaKnown RBP3.63□□□□□ -1.83
CCDC171-207ENST00000478913 SLC37A2Q8TED4 501 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 TMEM237Q96Q45 408 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 BPIFA3Q9BQP9 254 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 LLPHQ9BRT6 129 aaKnown RBP3.63□□□□□ -1.83
CCDC171-207ENST00000478913 HCAR1Q9BXC0 346 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 CCSER1Q9C0I3 900 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 SLC7A5P2Q9GIP4 190 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 MED4Q9NPJ6 270 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 GDAP2Q9NXN4 497 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 Q9UF83 564 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 FAM215AQ9Y5M1 114 aa3.63□□□□□ -1.83
CCDC171-207ENST00000478913 DYNC1H1Q14204 4646 aaKnown RBP3.63□□□□□ -1.83
CCDC171-207ENST00000478913 ALPK2Q86TB3 2170 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 HUWE1Q7Z6Z7 4374 aaKnown RBP3.62□□□□□ -1.83
CCDC171-207ENST00000478913 RNF103-CHMP3A0A140T963 221 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 GOLGA6L7A0A1B0GV03 622 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 EEF1E1-BLOC1S5C9J1V9 151 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 HAT1O14929 419 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 ALOX15BO15296 676 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 EEF1E1O43324 174 aaKnown RBP3.62□□□□□ -1.83
CCDC171-207ENST00000478913 LCA5LO95447 670 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 SLC2A10O95528 541 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 PCCBP05166 539 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 CLTAP09496 248 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 H2AFZP0C0S5 128 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 INAFM2P0DMQ5 153 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 H2AFXP16104 143 aaPredicted RBP3.62□□□□□ -1.83
CCDC171-207ENST00000478913 SLC25A16P16260 332 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 RORAP35398 523 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 XCR1P46094 333 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 OR1D4P47884 311 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 ALDH3B2P48448 385 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 MEOX2P50222 304 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 SLC26A5P58743 744 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 CD47Q08722 323 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 ZP4Q12836 540 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 TRDNQ13061 729 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 EIF4EBP2Q13542 120 aaPredicted RBP3.62□□□□□ -1.83
CCDC171-207ENST00000478913 SERTAD2Q14140 314 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 STK38Q15208 465 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 FBXL19-AS1Q494R0 122 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 DNAJC21Q5F1R6 531 aaKnown RBP3.62□□□□□ -1.83
CCDC171-207ENST00000478913 MEDAGQ5VYS4 303 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 DMKNQ6E0U4 476 aaPredicted RBP3.62□□□□□ -1.83
CCDC171-207ENST00000478913 SYT10Q6XYQ8 523 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 RBM43Q6ZSC3 357 aaKnown RBP3.62□□□□□ -1.83
CCDC171-207ENST00000478913 PAQR9Q6ZVX9 377 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 C10orf67Q8IYJ2 551 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 C11orf42Q8N5U0 333 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 CCDC148Q8NFR7 591 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 OR2Y1Q8NGV0 311 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 ZNF514Q96K75 400 aaPredicted RBP3.62□□□□□ -1.83
CCDC171-207ENST00000478913 GSDMAQ96QA5 445 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 SLC6A7Q99884 636 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 WRAP53Q9BUR4 548 aaKnown RBP3.62□□□□□ -1.83
CCDC171-207ENST00000478913 SUCNR1Q9BXA5 334 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 ELOVL4Q9GZR5 314 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 OPN3Q9H1Y3 402 aaPredicted RBP3.62□□□□□ -1.83
CCDC171-207ENST00000478913 MIEF1Q9NQG6 463 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 CNOT2Q9NZN8 540 aaKnown RBP3.62□□□□□ -1.83
CCDC171-207ENST00000478913 KLRF1Q9NZS2 232 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 DPM3Q9P2X0 92 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 GHRLQ9UBU3 117 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 SLC2A6Q9UGQ3 507 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 CDH9Q9ULB4 789 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 RRP15Q9Y3B9 282 aaKnown RBP3.62□□□□□ -1.83
CCDC171-207ENST00000478913 ALMS1Q8TCU4 4167 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 ATP8B3O60423 1300 aa3.62□□□□□ -1.83
CCDC171-207ENST00000478913 IGHV5-51A0A0C4DH38 117 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 KLF18A0A0U1RQI7 1052 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 A8MU10 97 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 H0YHG0 523 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 PES1O00541 588 aaKnown RBP3.61□□□□□ -1.83
CCDC171-207ENST00000478913 SLC17A2O00624 439 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 TOX3O15405 576 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms