RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 SLC16A14Q7RTX9 510 aa14.51□□□□□ -0.09
VIM-204ENST00000478746 KIRREL3Q8IZU9 778 aa14.51□□□□□ -0.09
VIM-204ENST00000478746 OR4K5Q8NGD3 323 aa14.51□□□□□ -0.09
VIM-204ENST00000478746 OR6X1Q8NH79 312 aa14.51□□□□□ -0.09
VIM-204ENST00000478746 DCLRE1CQ96SD1 692 aaKnown RBP14.51□□□□□ -0.09
VIM-204ENST00000478746 PKP2Q99959 881 aa14.51□□□□□ -0.09
VIM-204ENST00000478746 MEAF6Q9HAF1 191 aa14.51□□□□□ -0.09
VIM-204ENST00000478746 INSIG2Q9Y5U4 225 aa14.51□□□□□ -0.09
VIM-204ENST00000478746 NPTNQ9Y639 398 aa14.51□□□□□ -0.09
VIM-204ENST00000478746 A0A1B0GUS0 222 aa14.5□□□□□ -0.09
VIM-204ENST00000478746 LRRN3E7EW58 273 aa14.5□□□□□ -0.09
VIM-204ENST00000478746 TM9SF1O15321 606 aa14.5□□□□□ -0.09
VIM-204ENST00000478746 BIRC5O15392 142 aa14.5□□□□□ -0.09
VIM-204ENST00000478746 OR6A2O95222 327 aa14.5□□□□□ -0.09
VIM-204ENST00000478746 ADORA3P0DMS8 318 aa14.5□□□□□ -0.09
VIM-204ENST00000478746 APLNRP35414 380 aa14.5□□□□□ -0.09
VIM-204ENST00000478746 SLC1A6P48664 564 aa14.5□□□□□ -0.09
VIM-204ENST00000478746 MMP15P51511 669 aa14.5□□□□□ -0.09
VIM-204ENST00000478746 HIST2H2BDQ6DRA6 164 aa14.5□□□□□ -0.09
VIM-204ENST00000478746 SLC35D2Q76EJ3 337 aa14.5□□□□□ -0.09
VIM-204ENST00000478746 KLHL36Q8N4N3 616 aa14.5□□□□□ -0.09
VIM-204ENST00000478746 KIR3DL3Q8N743 410 aa14.5□□□□□ -0.09
VIM-204ENST00000478746 RBM15BQ8NDT2 890 aaKnown RBP14.5□□□□□ -0.09
VIM-204ENST00000478746 OR52E2Q8NGJ4 325 aa14.5□□□□□ -0.09
VIM-204ENST00000478746 BBS10Q8TAM1 723 aa14.5□□□□□ -0.09
VIM-204ENST00000478746 ZNF566Q969W8 418 aa14.5□□□□□ -0.09
VIM-204ENST00000478746 SORT1Q99523 831 aa14.5□□□□□ -0.09
VIM-204ENST00000478746 MMP27Q9H306 513 aa14.5□□□□□ -0.09
VIM-204ENST00000478746 TMEM27Q9HBJ8 222 aa14.5□□□□□ -0.09
VIM-204ENST00000478746 NPHS2Q9NP85 383 aa14.5□□□□□ -0.09
VIM-204ENST00000478746 C5orf58C9J3I9 102 aa14.49□□□□□ -0.09
VIM-204ENST00000478746 NUDT7P0C024 238 aa14.49□□□□□ -0.09
VIM-204ENST00000478746 CCNOP22674 350 aa14.49□□□□□ -0.09
VIM-204ENST00000478746 PRKAR1BP31321 381 aa14.49□□□□□ -0.09
VIM-204ENST00000478746 SLC6A9P48067 706 aa14.49□□□□□ -0.09
VIM-204ENST00000478746 GTDC1Q4AE62 458 aa14.49□□□□□ -0.09
VIM-204ENST00000478746 THEM4Q5T1C6 240 aa14.49□□□□□ -0.09
VIM-204ENST00000478746 JAZF1Q86VZ6 243 aa14.49□□□□□ -0.09
VIM-204ENST00000478746 OR5J2Q8NH18 312 aa14.49□□□□□ -0.09
VIM-204ENST00000478746 MAL2Q969L2 176 aa14.49□□□□□ -0.09
VIM-204ENST00000478746 DIRC2Q96SL1 478 aa14.49□□□□□ -0.09
VIM-204ENST00000478746 RSPO3Q9BXY4 272 aaPredicted RBP14.49□□□□□ -0.09
VIM-204ENST00000478746 PATZ1Q9HBE1 687 aaKnown RBP14.49□□□□□ -0.09
VIM-204ENST00000478746 BEX1Q9HBH7 125 aa14.49□□□□□ -0.09
VIM-204ENST00000478746 CYSLTR2Q9NS75 346 aa14.49□□□□□ -0.09
VIM-204ENST00000478746 HAO1Q9UJM8 370 aa14.49□□□□□ -0.09
VIM-204ENST00000478746 SOX21Q9Y651 276 aaPredicted RBP14.49□□□□□ -0.09
VIM-204ENST00000478746 IGHV3OR16-10A0A075B7F0 116 aa14.48□□□□□ -0.09
VIM-204ENST00000478746 M0QZ24 198 aa14.48□□□□□ -0.09
VIM-204ENST00000478746 IGHV2-70P01814 119 aa14.48□□□□□ -0.09
VIM-204ENST00000478746 QDPRP09417 244 aa14.48□□□□□ -0.09
VIM-204ENST00000478746 ETS2P15036 469 aa14.48□□□□□ -0.09
VIM-204ENST00000478746 LIPAP38571 399 aa14.48□□□□□ -0.09
VIM-204ENST00000478746 MPV17P39210 176 aa14.48□□□□□ -0.09
VIM-204ENST00000478746 NCALDP61601 193 aa14.48□□□□□ -0.09
VIM-204ENST00000478746 HSF2Q03933 536 aa14.48□□□□□ -0.09
VIM-204ENST00000478746 RGNQ15493 299 aa14.48□□□□□ -0.09
VIM-204ENST00000478746 OR1Q1Q15612 314 aa14.48□□□□□ -0.09
VIM-204ENST00000478746 ZNF362Q5T0B9 420 aaPredicted RBP14.48□□□□□ -0.09
VIM-204ENST00000478746 SPATA46Q5T0L3 261 aa14.48□□□□□ -0.09
VIM-204ENST00000478746 SPICQ8N5J4 248 aa14.48□□□□□ -0.09
VIM-204ENST00000478746 WFDC12Q8WWY7 111 aa14.48□□□□□ -0.09
VIM-204ENST00000478746 GEMIN6Q8WXD5 167 aaKnown RBP14.48□□□□□ -0.09
VIM-204ENST00000478746 VPS33AQ96AX1 596 aa14.48□□□□□ -0.09
VIM-204ENST00000478746 SLC25A44Q96H78 314 aaPredicted RBP14.48□□□□□ -0.09
VIM-204ENST00000478746 ITCHQ96J02 903 aa14.48□□□□□ -0.09
VIM-204ENST00000478746 RMND5AQ9H871 391 aa14.48□□□□□ -0.09
VIM-204ENST00000478746 A4GALTQ9NPC4 353 aa14.48□□□□□ -0.09
VIM-204ENST00000478746 PNPOQ9NVS9 261 aa14.48□□□□□ -0.09
VIM-204ENST00000478746 EIF3KQ9UBQ5 218 aaKnown RBP14.48□□□□□ -0.09
VIM-204ENST00000478746 ZDHHC8Q9ULC8 765 aa14.48□□□□□ -0.09
VIM-204ENST00000478746 ZSCAN5BA6NJL1 495 aa14.47□□□□□ -0.09
VIM-204ENST00000478746 SDHDO14521 159 aa14.47□□□□□ -0.09
VIM-204ENST00000478746 SLC22A3O75751 556 aa14.47□□□□□ -0.09
VIM-204ENST00000478746 MT-ATP6P00846 226 aa14.47□□□□□ -0.09
VIM-204ENST00000478746 CRYBA1P05813 215 aa14.47□□□□□ -0.09
VIM-204ENST00000478746 ADH4P08319 380 aa14.47□□□□□ -0.09
VIM-204ENST00000478746 IGHV4-38-2P0DP08 117 aa14.47□□□□□ -0.09
VIM-204ENST00000478746 SEC61A1P61619 476 aaKnown RBP14.47□□□□□ -0.09
VIM-204ENST00000478746 PAX8Q06710 450 aa14.47□□□□□ -0.09
VIM-204ENST00000478746 SPRNQ5BIV9 151 aa14.47□□□□□ -0.09
VIM-204ENST00000478746 BRICD5Q6PL45 260 aa14.47□□□□□ -0.09
VIM-204ENST00000478746 UNQ6126/PRO20091Q6UXV3 157 aa14.47□□□□□ -0.09
VIM-204ENST00000478746 C9orf139Q6ZV77 190 aa14.47□□□□□ -0.09
VIM-204ENST00000478746 COMTD1Q86VU5 262 aa14.47□□□□□ -0.09
VIM-204ENST00000478746 PARP8Q8N3A8 854 aa14.47□□□□□ -0.09
VIM-204ENST00000478746 LRRC18Q8N456 261 aa14.47□□□□□ -0.09
VIM-204ENST00000478746 MREGQ8N565 214 aa14.47□□□□□ -0.09
VIM-204ENST00000478746 OR4F5Q8NH21 305 aa14.47□□□□□ -0.09
VIM-204ENST00000478746 IPCEF1Q8WWN9 437 aaPredicted RBP14.47□□□□□ -0.09
VIM-204ENST00000478746 MARS2Q96GW9 593 aaKnown RBP14.47□□□□□ -0.09
VIM-204ENST00000478746 TMEM43Q9BTV4 400 aa14.47□□□□□ -0.09
VIM-204ENST00000478746 ARGLU1Q9NWB6 273 aaPredicted RBP14.47□□□□□ -0.09
VIM-204ENST00000478746 DCAF16Q9NXF7 216 aa14.47□□□□□ -0.09
VIM-204ENST00000478746 TANC2Q9HCD6 1990 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 A0A0B4J2E0 115 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 A0A1B0GX12 115 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 FAM181BA6NEQ2 426 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 TIMM23O14925 209 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 RNF13O43567 381 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms