RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 BHLHE40O14503 412 aa23.42■■□□□ 1.34
CCM2-211ENST00000478582 SIAH2O43255 324 aa23.42■■□□□ 1.34
CCM2-211ENST00000478582 WNT11O96014 354 aa23.42■■□□□ 1.34
CCM2-211ENST00000478582 CD47Q08722 323 aa23.42■■□□□ 1.34
CCM2-211ENST00000478582 NRN1LQ496H8 165 aa23.42■■□□□ 1.34
CCM2-211ENST00000478582 BEX5Q5H9J7 111 aa23.42■■□□□ 1.34
CCM2-211ENST00000478582 FAHD1Q6P587 224 aa23.42■■□□□ 1.34
CCM2-211ENST00000478582 SVOPLQ8N434 492 aa23.42■■□□□ 1.34
CCM2-211ENST00000478582 OR8D4Q8NGM9 314 aa23.42■■□□□ 1.34
CCM2-211ENST00000478582 SNX18Q96RF0 628 aa23.42■■□□□ 1.34
CCM2-211ENST00000478582 LIME1Q9H400 295 aa23.42■■□□□ 1.34
CCM2-211ENST00000478582 EDARQ9UNE0 448 aa23.42■■□□□ 1.34
CCM2-211ENST00000478582 ABCA4P78363 2273 aa23.42■■□□□ 1.34
CCM2-211ENST00000478582 A0A096LPE4 126 aa23.41■■□□□ 1.34
CCM2-211ENST00000478582 A0A1W2PPZ6 126 aa23.41■■□□□ 1.34
CCM2-211ENST00000478582 G3V2T6 193 aa23.41■■□□□ 1.34
CCM2-211ENST00000478582 HRGP04196 525 aa23.41■■□□□ 1.34
CCM2-211ENST00000478582 LOXP28300 417 aaPredicted RBP23.41■■□□□ 1.34
CCM2-211ENST00000478582 ZNF84P51523 738 aa23.41■■□□□ 1.34
CCM2-211ENST00000478582 KLHL24Q6TFL4 600 aa23.41■■□□□ 1.34
CCM2-211ENST00000478582 ZNF813Q6ZN06 617 aa23.41■■□□□ 1.34
CCM2-211ENST00000478582 ZDHHC13Q8IUH4 622 aa23.41■■□□□ 1.34
CCM2-211ENST00000478582 ATG16L2Q8NAA4 619 aa23.41■■□□□ 1.34
CCM2-211ENST00000478582 NINJ1Q92982 152 aa23.41■■□□□ 1.34
CCM2-211ENST00000478582 GABARAPL1Q9H0R8 117 aa23.41■■□□□ 1.34
CCM2-211ENST00000478582 S100A14Q9HCY8 104 aa23.41■■□□□ 1.34
CCM2-211ENST00000478582 TMEM38BQ9NVV0 291 aa23.41■■□□□ 1.34
CCM2-211ENST00000478582 VSX1Q9NZR4 365 aaPredicted RBP23.41■■□□□ 1.34
CCM2-211ENST00000478582 ST6GALNAC2Q9UJ37 374 aa23.41■■□□□ 1.34
CCM2-211ENST00000478582 IGKV1D-43A0A0B4J1Z2 117 aa23.4■■□□□ 1.34
CCM2-211ENST00000478582 A0A1W2PR80 420 aa23.4■■□□□ 1.34
CCM2-211ENST00000478582 SOCS2O14508 198 aa23.4■■□□□ 1.34
CCM2-211ENST00000478582 MGRN1O60291 552 aa23.4■■□□□ 1.34
CCM2-211ENST00000478582 SLC2A10O95528 541 aa23.4■■□□□ 1.34
CCM2-211ENST00000478582 IGFBP1P08833 259 aaPredicted RBP23.4■■□□□ 1.34
CCM2-211ENST00000478582 UBE2NP61088 152 aaKnown RBP23.4■■□□□ 1.34
CCM2-211ENST00000478582 FMODQ06828 376 aa23.4■■□□□ 1.34
CCM2-211ENST00000478582 CLEC12AQ5QGZ9 265 aa23.4■■□□□ 1.34
CCM2-211ENST00000478582 PKP2Q99959 881 aa23.4■■□□□ 1.34
CCM2-211ENST00000478582 TSSK6Q9BXA6 273 aa23.4■■□□□ 1.34
CCM2-211ENST00000478582 TBC1D23Q9NUY8 699 aa23.4■■□□□ 1.34
CCM2-211ENST00000478582 BAIAP2Q9UQB8 552 aa23.4■■□□□ 1.34
CCM2-211ENST00000478582 AKAP6Q13023 2319 aa23.4■■□□□ 1.34
CCM2-211ENST00000478582 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP23.39■■□□□ 1.33
CCM2-211ENST00000478582 H7C1C5 153 aa23.39■■□□□ 1.33
CCM2-211ENST00000478582 SEC14L2O76054 403 aa23.39■■□□□ 1.33
CCM2-211ENST00000478582 SOX14O95416 240 aa23.39■■□□□ 1.33
CCM2-211ENST00000478582 OSMP13725 252 aa23.39■■□□□ 1.33
CCM2-211ENST00000478582 B4GALT1P15291 398 aa23.39■■□□□ 1.33
CCM2-211ENST00000478582 ZNF23P17027 643 aa23.39■■□□□ 1.33
CCM2-211ENST00000478582 NOS3P29474 1203 aa23.39■■□□□ 1.33
CCM2-211ENST00000478582 CDKN2AP42771 156 aaKnown RBP23.39■■□□□ 1.33
CCM2-211ENST00000478582 NR1H2P55055 460 aa23.39■■□□□ 1.33
CCM2-211ENST00000478582 LCN6P62502 163 aa23.39■■□□□ 1.33
CCM2-211ENST00000478582 SLC36A3Q495N2 470 aa23.39■■□□□ 1.33
CCM2-211ENST00000478582 PTCHD4Q6ZW05 846 aa23.39■■□□□ 1.33
CCM2-211ENST00000478582 LNX2Q8N448 690 aa23.39■■□□□ 1.33
CCM2-211ENST00000478582 SEMA6AQ9H2E6 1030 aa23.39■■□□□ 1.33
CCM2-211ENST00000478582 MOV10Q9HCE1 1003 aaKnown RBP23.39■■□□□ 1.33
CCM2-211ENST00000478582 NPAP1Q9NZP6 1156 aa23.39■■□□□ 1.33
CCM2-211ENST00000478582 UGT2A1Q9Y4X1 527 aa23.39■■□□□ 1.33
CCM2-211ENST00000478582 OR8G3PP0DMU2 310 aa23.38■■□□□ 1.33
CCM2-211ENST00000478582 HIST1H1CP16403 213 aaKnown RBP23.38■■□□□ 1.33
CCM2-211ENST00000478582 DAPP51397 102 aa23.38■■□□□ 1.33
CCM2-211ENST00000478582 MRPS34P82930 218 aaKnown RBP23.38■■□□□ 1.33
CCM2-211ENST00000478582 NCMAPQ5T1S8 102 aa23.38■■□□□ 1.33
CCM2-211ENST00000478582 ALKBH2Q6NS38 261 aa23.38■■□□□ 1.33
CCM2-211ENST00000478582 SPNS3Q6ZMD2 512 aa23.38■■□□□ 1.33
CCM2-211ENST00000478582 FOXL2NBQ6ZUU3 175 aa23.38■■□□□ 1.33
CCM2-211ENST00000478582 SLC22A24Q8N4F4 322 aa23.38■■□□□ 1.33
CCM2-211ENST00000478582 FAM169BQ8N8A8 192 aa23.38■■□□□ 1.33
CCM2-211ENST00000478582 OR2T33Q8NG76 320 aa23.38■■□□□ 1.33
CCM2-211ENST00000478582 ESRP2Q9H6T0 727 aaKnown RBP23.38■■□□□ 1.33
CCM2-211ENST00000478582 PLEKHF2Q9H8W4 249 aa23.38■■□□□ 1.33
CCM2-211ENST00000478582 PARP8Q8N3A8 854 aa23.37■■□□□ 1.33
CCM2-211ENST00000478582 TEX47Q8TBZ9 253 aa23.37■■□□□ 1.33
CCM2-211ENST00000478582 PIK3IP1Q96FE7 263 aa23.37■■□□□ 1.33
CCM2-211ENST00000478582 PLPPR2Q96GM1 343 aa23.37■■□□□ 1.33
CCM2-211ENST00000478582 OSBPL10Q9BXB5 764 aa23.37■■□□□ 1.33
CCM2-211ENST00000478582 SYT4Q9H2B2 425 aa23.37■■□□□ 1.33
CCM2-211ENST00000478582 B3GNT2Q9NY97 397 aa23.37■■□□□ 1.33
CCM2-211ENST00000478582 KIF17Q9P2E2 1029 aa23.37■■□□□ 1.33
CCM2-211ENST00000478582 CRNNQ9UBG3 495 aaPredicted RBP23.37■■□□□ 1.33
CCM2-211ENST00000478582 AKAP9Q99996 3911 aa23.37■■□□□ 1.33
CCM2-211ENST00000478582 DPRXA6NFQ7 191 aa23.36■■□□□ 1.33
CCM2-211ENST00000478582 H3BN98 237 aa23.36■■□□□ 1.33
CCM2-211ENST00000478582 NPR2P20594 1047 aa23.36■■□□□ 1.33
CCM2-211ENST00000478582 ART1P52961 327 aa23.36■■□□□ 1.33
CCM2-211ENST00000478582 C3orf36Q3SXR2 165 aa23.36■■□□□ 1.33
CCM2-211ENST00000478582 ZNF362Q5T0B9 420 aaPredicted RBP23.36■■□□□ 1.33
CCM2-211ENST00000478582 JAZF1Q86VZ6 243 aa23.36■■□□□ 1.33
CCM2-211ENST00000478582 SKA3Q8IX90 412 aa23.36■■□□□ 1.33
CCM2-211ENST00000478582 OR4Q3Q8NH05 313 aa23.36■■□□□ 1.33
CCM2-211ENST00000478582 OR4K13Q8NH42 304 aa23.36■■□□□ 1.33
CCM2-211ENST00000478582 NSMAFQ92636 917 aa23.36■■□□□ 1.33
CCM2-211ENST00000478582 TMEM204Q9BSN7 226 aa23.36■■□□□ 1.33
CCM2-211ENST00000478582 SIAEQ9HAT2 523 aa23.36■■□□□ 1.33
CCM2-211ENST00000478582 PAPOLBQ9NRJ5 636 aaKnown RBP23.36■■□□□ 1.33
CCM2-211ENST00000478582 ZNF224Q9NZL3 707 aa23.36■■□□□ 1.33
CCM2-211ENST00000478582 OAZ3Q9UMX2 235 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms