RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 TMEM179BQ7Z7N9 219 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 HS3ST5Q8IZT8 346 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 LINC00471Q8N535 108 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 OR52L1Q8NGH7 329 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 MAGEE2Q8TD90 523 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-215ENST00000478531 NEUROG1Q92886 237 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 ERMAPQ96PL5 475 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-215ENST00000478531 KCNK17Q96T54 332 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 SH3GL3Q99963 347 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 MRPL13Q9BYD1 178 aaKnown RBP6.02□□□□□ -1.45
BRCA1-215ENST00000478531 RERGLQ9H628 205 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 DENND2DQ9H6A0 471 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-215ENST00000478531 PLEKHF2Q9H8W4 249 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 CCM2LQ9NUG4 571 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-215ENST00000478531 POU2F3Q9UKI9 436 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 IER3IP1Q9Y5U9 82 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 MAGED1Q9Y5V3 778 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-215ENST00000478531 USF3Q68DE3 2245 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 ZANQ9Y493 2812 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 HIVEP1P15822 2718 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 ARPC4-TTLL3A0A0A6YYG9 625 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 A0A1W2PPL8 197 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 CENPBD1B2RD01 187 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 CELA3BP08861 270 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 PATE4P0C8F1 98 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 NR2C1P13056 603 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 HOXB6P17509 224 aaKnown RBP6.02□□□□□ -1.45
BRCA1-215ENST00000478531 CD40P25942 277 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 SDHAP31040 664 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 SLC6A6P31641 620 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 PTDSS1P48651 473 aaKnown RBP6.02□□□□□ -1.45
BRCA1-215ENST00000478531 IDH3GP51553 393 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-215ENST00000478531 RPS6KA3P51812 740 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 CDH11P55287 796 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 KEAP1Q14145 624 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 HIST3H3Q16695 136 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 RFX4Q33E94 735 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 ZNF770Q6IQ21 691 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-215ENST00000478531 PAMR1Q6UXH9 720 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 DPY19L2P2Q6ZN68 376 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 SSX8Q7RTT4 187 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 FAM122BQ7Z309 247 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 MDP1Q86V88 176 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 MYPOPQ86VE0 399 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-215ENST00000478531 JAZF1Q86VZ6 243 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 LRRC18Q8N456 261 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 SLC22A24Q8N4F4 322 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 ARIH2OSQ8N7S6 290 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 GIPC3Q8TF64 312 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 NANOS1Q8WY41 292 aaKnown RBP6.02□□□□□ -1.45
BRCA1-215ENST00000478531 AKAP1Q92667 903 aaKnown RBP eCLIP6.02□□□□□ -1.45
BRCA1-215ENST00000478531 RADILQ96JH8 1075 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 FOXN4Q96NZ1 517 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 SLC38A2Q96QD8 506 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 RBP7Q96R05 134 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 GPX7Q96SL4 187 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-215ENST00000478531 FEVQ99581 238 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 NIPSNAP1Q9BPW8 284 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 KCNS3Q9BQ31 491 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 ALG12Q9BV10 488 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 PLA2G12AQ9BZM1 189 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 SYT4Q9H2B2 425 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 SEC61A2Q9H9S3 476 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 OBP2BQ9NPH6 170 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 NRIP3Q9NQ35 241 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 TBC1D23Q9NUY8 699 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 TMEM38BQ9NVV0 291 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 PDP1Q9P0J1 537 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-215ENST00000478531 KIF17Q9P2E2 1029 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 DNAJB9Q9UBS3 223 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 CDH10Q9Y6N8 788 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 IGHV1-18A0A0C4DH31 117 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 PRSS37A4D1T9 235 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 ATP6V1G2-DDX39BF2Z307 99 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 IMPA2O14732 288 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 DEAF1O75398 565 aaPredicted RBP6.01□□□□□ -1.45
BRCA1-215ENST00000478531 FARS2O95363 451 aaKnown RBP6.01□□□□□ -1.45
BRCA1-215ENST00000478531 RAB36O95755 333 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 IGFBP1P08833 259 aaPredicted RBP6.01□□□□□ -1.45
BRCA1-215ENST00000478531 CECR9P0C854 216 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 PTAFRP25105 342 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 GIPRP48546 466 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 DBPQ10586 325 aaPredicted RBP6.01□□□□□ -1.45
BRCA1-215ENST00000478531 KPNB1Q14974 876 aaKnown RBP6.01□□□□□ -1.45
BRCA1-215ENST00000478531 SGCAQ16586 387 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 GSG1Q2KHT4 349 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 THEM4Q5T1C6 240 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 SLC35F1Q5T1Q4 408 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 C10orf128Q5T292 105 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 GPR139Q6DWJ6 353 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 LEG1Q6P5S2 330 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 PTCHD4Q6ZW05 846 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 SLC16A14Q7RTX9 510 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 SKA3Q8IX90 412 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 PAPD5Q8NDF8 572 aaKnown RBP6.01□□□□□ -1.45
BRCA1-215ENST00000478531 SDR9C7Q8NEX9 313 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 OR8D4Q8NGM9 314 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 PYDC1Q8WXC3 89 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 CCL19Q99731 98 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 DGCR6LQ9BY27 220 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms