RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 PLSCR5A0PG75 271 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 OR6C76A6NM76 312 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 SURF4O15260 269 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 SLC36A2Q495M3 483 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 ZNF425Q6IV72 752 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 FAM198BQ6UWH4 519 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 C12orf45Q8N5I9 185 aaPredicted RBP12.98□□□□□ -0.33
NPHP4-208ENST00000478423 UCN3Q969E3 161 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 SLC25A46Q96AG3 418 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 ARL5BQ96KC2 179 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 NICN1Q9BSH3 213 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 ACKR4Q9NPB9 350 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 NKX2-2O95096 273 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 HOXC4P09017 264 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-208ENST00000478423 ZNF93P35789 620 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-208ENST00000478423 TAS2R31P59538 309 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 RNF4P78317 190 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 CCL7P80098 99 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 LINC00299Q6ZSB3 139 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 KCNG3Q8TAE7 436 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 ST8SIA1Q92185 356 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 FAM3DQ96BQ1 224 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 ZBTB8AQ96BR9 441 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 CMSS1Q9BQ75 279 aaKnown RBP12.97□□□□□ -0.33
NPHP4-208ENST00000478423 C11orf54Q9H0W9 315 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-208ENST00000478423 MRPS28Q9Y2Q9 187 aaKnown RBP12.97□□□□□ -0.33
NPHP4-208ENST00000478423 CCL27Q9Y4X3 112 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 SCN4AP35499 1836 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 ANKRD61A6NGH8 418 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 TRAPPC2LH3BP13 241 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 VAMP5O95183 116 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 SERPINE2P07093 398 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 MEX3BQ6ZN04 569 aaKnown RBP12.97□□□□□ -0.33
NPHP4-208ENST00000478423 TRAPPC6BQ86SZ2 158 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 LYSMD2Q8IV50 215 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 RAB3CQ96E17 227 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 NUDT9Q9BW91 350 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 EHFQ9NZC4 300 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 ASH2LQ9UBL3 628 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 GPR55Q9Y2T6 319 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-208ENST00000478423 CHST2Q9Y4C5 530 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 IGHV1OR21-1A0A087WYE8 117 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 TNFRSF10AO00220 468 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 SLC33A1O00400 549 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-208ENST00000478423 IFNA5P01569 189 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 RAC2P15153 192 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 CAV2P51636 162 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 OTPQ5XKR4 325 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 CORO6Q6QEF8 472 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 NPSR1Q6W5P4 371 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 SULF2Q8IWU5 870 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 MAML2Q8IZL2 1156 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-208ENST00000478423 SLC22A24Q8N4F4 322 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 OBP2BQ9NPH6 170 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 NDUFB11Q9NX14 153 aa12.97□□□□□ -0.33
NPHP4-208ENST00000478423 GREB1LQ9C091 1923 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-208ENST00000478423 FRG2CA6NGY1 282 aa12.96□□□□□ -0.33
NPHP4-208ENST00000478423 ADAM23O75077 832 aa12.96□□□□□ -0.33
NPHP4-208ENST00000478423 FKBP2P26885 142 aaKnown RBP12.96□□□□□ -0.33
NPHP4-208ENST00000478423 BLVRBP30043 206 aaPredicted RBP12.96□□□□□ -0.33
NPHP4-208ENST00000478423 ZNF616Q08AN1 781 aa12.96□□□□□ -0.33
NPHP4-208ENST00000478423 GUSBP11Q6P575 273 aa12.96□□□□□ -0.33
NPHP4-208ENST00000478423 LRRC69Q6ZNQ3 347 aa12.96□□□□□ -0.33
NPHP4-208ENST00000478423 SYT9Q86SS6 491 aa12.96□□□□□ -0.33
NPHP4-208ENST00000478423 CELF2-AS1Q8N7Q2 184 aa12.96□□□□□ -0.33
NPHP4-208ENST00000478423 OR56B1Q8NGI3 324 aa12.96□□□□□ -0.33
NPHP4-208ENST00000478423 OPALINQ96PE5 141 aa12.96□□□□□ -0.33
NPHP4-208ENST00000478423 VRK1Q99986 396 aaPredicted RBP12.96□□□□□ -0.33
NPHP4-208ENST00000478423 WWTR1Q9GZV5 400 aa12.96□□□□□ -0.33
NPHP4-208ENST00000478423 METTL9Q9H1A3 318 aa12.96□□□□□ -0.33
NPHP4-208ENST00000478423 CGGBP1Q9UFW8 167 aaPredicted RBP12.96□□□□□ -0.33
NPHP4-208ENST00000478423 LSM5Q9Y4Y9 91 aaKnown RBP12.96□□□□□ -0.33
NPHP4-208ENST00000478423 PEX14O75381 377 aa12.96□□□□□ -0.33
NPHP4-208ENST00000478423 HLA-AP01891 365 aaKnown RBP12.96□□□□□ -0.33
NPHP4-208ENST00000478423 TNK1Q13470 666 aa12.96□□□□□ -0.33
NPHP4-208ENST00000478423 BPHLQ86WA6 291 aaPredicted RBP12.96□□□□□ -0.33
NPHP4-208ENST00000478423 PDZD9Q8IXQ8 264 aa12.96□□□□□ -0.33
NPHP4-208ENST00000478423 OR6M1Q8NGM8 313 aa12.96□□□□□ -0.33
NPHP4-208ENST00000478423 OR2M2Q96R28 347 aa12.96□□□□□ -0.33
NPHP4-208ENST00000478423 EMC7Q9NPA0 242 aa12.96□□□□□ -0.33
NPHP4-208ENST00000478423 LOXL2Q9Y4K0 774 aa12.96□□□□□ -0.33
NPHP4-208ENST00000478423 PRAMEF27A3QJZ7 478 aa12.96□□□□□ -0.34
NPHP4-208ENST00000478423 SPDEFO95238 335 aa12.96□□□□□ -0.34
NPHP4-208ENST00000478423 TFF2Q03403 129 aa12.96□□□□□ -0.34
NPHP4-208ENST00000478423 USP51Q70EK9 711 aa12.96□□□□□ -0.34
NPHP4-208ENST00000478423 DYNC2LI1Q8TCX1 351 aa12.96□□□□□ -0.34
NPHP4-208ENST00000478423 PSD2Q9BQI7 771 aa12.96□□□□□ -0.34
NPHP4-208ENST00000478423 UGT2A1Q9Y4X1 527 aa12.96□□□□□ -0.34
NPHP4-208ENST00000478423 CKAP5Q14008 2032 aa12.96□□□□□ -0.34
NPHP4-208ENST00000478423 PIGBOS1A0A0B4J2F0 54 aa12.96□□□□□ -0.34
NPHP4-208ENST00000478423 APOC3P02656 99 aa12.96□□□□□ -0.34
NPHP4-208ENST00000478423 CPEP16870 476 aa12.96□□□□□ -0.34
NPHP4-208ENST00000478423 PRKACBP22694 351 aa12.96□□□□□ -0.34
NPHP4-208ENST00000478423 CDK2P24941 298 aa12.96□□□□□ -0.34
NPHP4-208ENST00000478423 DLSTP36957 453 aa12.96□□□□□ -0.34
NPHP4-208ENST00000478423 EMC4Q5J8M3 183 aa12.96□□□□□ -0.34
NPHP4-208ENST00000478423 ZNF684Q5T5D7 378 aa12.96□□□□□ -0.34
NPHP4-208ENST00000478423 IDO2Q6ZQW0 420 aa12.96□□□□□ -0.34
NPHP4-208ENST00000478423 ZNF767PQ75MW2 155 aa12.96□□□□□ -0.34
NPHP4-208ENST00000478423 GIMAP1Q8WWP7 306 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms