RNA–Protein interactions for RNA: ENST00000477741.5

NELFCD-205, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-205ENST00000477741 HLA-DQA2P01906 255 aa12.67□□□□□ -0.38
NELFCD-205ENST00000477741 LIMS3P0CW19 117 aa12.67□□□□□ -0.38
NELFCD-205ENST00000477741 LIMS4P0CW20 117 aa12.67□□□□□ -0.38
NELFCD-205ENST00000477741 HIST3H3Q16695 136 aa12.67□□□□□ -0.38
NELFCD-205ENST00000477741 KLHL22Q53GT1 634 aa12.67□□□□□ -0.38
NELFCD-205ENST00000477741 RPTNQ6XPR3 784 aa12.67□□□□□ -0.38
NELFCD-205ENST00000477741 LINGO2Q7L985 606 aa12.67□□□□□ -0.38
NELFCD-205ENST00000477741 NUFIP2Q7Z417 695 aaKnown RBP12.67□□□□□ -0.38
NELFCD-205ENST00000477741 TIGD4Q8IY51 512 aa12.67□□□□□ -0.38
NELFCD-205ENST00000477741 ALKBH3Q96Q83 286 aaPredicted RBP12.67□□□□□ -0.38
NELFCD-205ENST00000477741 FGF20Q9NP95 211 aaPredicted RBP12.67□□□□□ -0.38
NELFCD-205ENST00000477741 CCNB1IP1Q9NPC3 277 aa12.67□□□□□ -0.38
NELFCD-205ENST00000477741 HAO2Q9NYQ3 351 aa12.67□□□□□ -0.38
NELFCD-205ENST00000477741 CLCF1Q9UBD9 225 aa12.67□□□□□ -0.38
NELFCD-205ENST00000477741 FOXD3Q9UJU5 478 aaPredicted RBP12.67□□□□□ -0.38
NELFCD-205ENST00000477741 KLHDC2Q9Y2U9 406 aa12.67□□□□□ -0.38
NELFCD-205ENST00000477741 A0A1W2PQL4 384 aaPredicted RBP12.66□□□□□ -0.38
NELFCD-205ENST00000477741 PSMD9O00233 223 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 KALRNO60229 2985 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 DCKP27707 260 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 PTGS2P35354 604 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 AAED1Q7RTV5 226 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 OR6N1Q8NGY5 312 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 SNX18Q96RF0 628 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 CDCA4Q9BXL8 241 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 PAQR5Q9NXK6 330 aaPredicted RBP12.66□□□□□ -0.38
NELFCD-205ENST00000477741 GLTPQ9NZD2 209 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 KLHL9Q9P2J3 617 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 IGKV3D-15A0A087WSY6 115 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 SEC14L2O76054 403 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 IGHA1P01876 353 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 TPOP07202 933 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 CSNK1A1P48729 337 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 GP2P55259 537 aaKnown RBP12.66□□□□□ -0.38
NELFCD-205ENST00000477741 ZNF85Q03923 595 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 GGTLC2Q14390 218 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 SLC35D3Q5M8T2 416 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 FAM205BPQ63HN1 556 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 DPY19L4Q7Z388 723 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 CD163Q86VB7 1156 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 C9orf106Q8NAJ2 232 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 TMEM54Q969K7 222 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 ADAD1Q96M93 576 aaKnown RBP12.66□□□□□ -0.38
NELFCD-205ENST00000477741 CNTNAP3BQ96NU0 1288 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 RBP7Q96R05 134 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 CNN2Q99439 309 aaKnown RBP12.66□□□□□ -0.38
NELFCD-205ENST00000477741 CNTNAP3Q9BZ76 1288 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 RACGAP1Q9H0H5 632 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 ISG20L2Q9H9L3 353 aaKnown RBP12.66□□□□□ -0.38
NELFCD-205ENST00000477741 ERVK13-1Q9NX77 482 aa12.66□□□□□ -0.38
NELFCD-205ENST00000477741 NOSIPQ9Y314 301 aaKnown RBP12.66□□□□□ -0.38
NELFCD-205ENST00000477741 RPL5P46777 297 aaKnown RBP12.65□□□□□ -0.38
NELFCD-205ENST00000477741 ALDH3B2P48448 385 aa12.65□□□□□ -0.38
NELFCD-205ENST00000477741 FOXG1P55316 489 aaPredicted RBP12.65□□□□□ -0.38
NELFCD-205ENST00000477741 RAB39AQ14964 217 aa12.65□□□□□ -0.38
NELFCD-205ENST00000477741 ACSF3Q4G176 576 aaPredicted RBP12.65□□□□□ -0.38
NELFCD-205ENST00000477741 THEM4Q5T1C6 240 aa12.65□□□□□ -0.38
NELFCD-205ENST00000477741 TSPO2Q5TGU0 170 aa12.65□□□□□ -0.38
NELFCD-205ENST00000477741 RTL6Q6ICC9 239 aa12.65□□□□□ -0.38
NELFCD-205ENST00000477741 SLC25A47Q6Q0C1 308 aa12.65□□□□□ -0.38
NELFCD-205ENST00000477741 SEM1Q6ZVN7 128 aa12.65□□□□□ -0.38
NELFCD-205ENST00000477741 OR6N2Q8NGY6 317 aa12.65□□□□□ -0.38
NELFCD-205ENST00000477741 AMELYQ99218 206 aa12.65□□□□□ -0.38
NELFCD-205ENST00000477741 SLX1AQ9BQ83 275 aa12.65□□□□□ -0.38
NELFCD-205ENST00000477741 C12orf49Q9H741 205 aa12.65□□□□□ -0.38
NELFCD-205ENST00000477741 RNF122Q9H9V4 155 aa12.65□□□□□ -0.38
NELFCD-205ENST00000477741 BCO1Q9HAY6 547 aa12.65□□□□□ -0.38
NELFCD-205ENST00000477741 MOKQ9UQ07 419 aa12.65□□□□□ -0.38
NELFCD-205ENST00000477741 PCDHGB1Q9Y5G3 927 aa12.65□□□□□ -0.38
NELFCD-205ENST00000477741 PHF3Q92576 2039 aaKnown RBP12.65□□□□□ -0.38
NELFCD-205ENST00000477741 FREM1Q5H8C1 2179 aa12.65□□□□□ -0.38
NELFCD-205ENST00000477741 GTF3C1Q12789 2109 aa12.65□□□□□ -0.38
NELFCD-205ENST00000477741 A0A1W2PPL8 197 aa12.65□□□□□ -0.39
NELFCD-205ENST00000477741 LRRTM2O43300 516 aa12.65□□□□□ -0.39
NELFCD-205ENST00000477741 WNT11O96014 354 aa12.65□□□□□ -0.39
NELFCD-205ENST00000477741 LALBAP00709 142 aa12.65□□□□□ -0.39
NELFCD-205ENST00000477741 GAAP10253 952 aa12.65□□□□□ -0.39
NELFCD-205ENST00000477741 CRABP1P29762 137 aa12.65□□□□□ -0.39
NELFCD-205ENST00000477741 NR1H2P55055 460 aa12.65□□□□□ -0.39
NELFCD-205ENST00000477741 MED22Q15528 200 aa12.65□□□□□ -0.39
NELFCD-205ENST00000477741 LCN1P1Q5VSP4 162 aa12.65□□□□□ -0.39
NELFCD-205ENST00000477741 FOXB2Q5VYV0 432 aa12.65□□□□□ -0.39
NELFCD-205ENST00000477741 SLC35F2Q8IXU6 374 aa12.65□□□□□ -0.39
NELFCD-205ENST00000477741 C20orf196Q8IYI0 205 aa12.65□□□□□ -0.39
NELFCD-205ENST00000477741 NANOGP1Q8N7R0 232 aa12.65□□□□□ -0.39
NELFCD-205ENST00000477741 SLC26A10Q8NG04 563 aa12.65□□□□□ -0.39
NELFCD-205ENST00000477741 GATAD2BQ8WXI9 593 aa12.65□□□□□ -0.39
NELFCD-205ENST00000477741 MUL1Q969V5 352 aa12.65□□□□□ -0.39
NELFCD-205ENST00000477741 SEC61A2Q9H9S3 476 aa12.65□□□□□ -0.39
NELFCD-205ENST00000477741 EMC7Q9NPA0 242 aa12.65□□□□□ -0.39
NELFCD-205ENST00000477741 KCNG2Q9UJ96 466 aa12.65□□□□□ -0.39
NELFCD-205ENST00000477741 LSM2Q9Y333 95 aaKnown RBP12.65□□□□□ -0.39
NELFCD-205ENST00000477741 UGT2A1Q9Y4X1 527 aa12.65□□□□□ -0.39
NELFCD-205ENST00000477741 NBASA2RRP1 2371 aa12.64□□□□□ -0.39
NELFCD-205ENST00000477741 OR14I1A6ND48 311 aa12.64□□□□□ -0.39
NELFCD-205ENST00000477741 A6NHS1 94 aa12.64□□□□□ -0.39
NELFCD-205ENST00000477741 TTLL8A6PVC2 850 aa12.64□□□□□ -0.39
NELFCD-205ENST00000477741 MRPL33O75394 65 aaKnown RBP12.64□□□□□ -0.39
NELFCD-205ENST00000477741 YES1P07947 543 aa12.64□□□□□ -0.39
NELFCD-205ENST00000477741 HSMCR30P0CW71 290 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms