RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 SLC22A23A1A5C7 686 aa13.48□□□□□ -0.25
SEC13-215ENST00000477547 SEC14L2O76054 403 aa13.48□□□□□ -0.25
SEC13-215ENST00000477547 SNAP29O95721 258 aa13.48□□□□□ -0.25
SEC13-215ENST00000477547 QDPRP09417 244 aa13.48□□□□□ -0.25
SEC13-215ENST00000477547 IL32P24001 234 aa13.48□□□□□ -0.25
SEC13-215ENST00000477547 MPGP29372 298 aa13.48□□□□□ -0.25
SEC13-215ENST00000477547 POLR2IP36954 125 aaKnown RBP13.48□□□□□ -0.25
SEC13-215ENST00000477547 CDKN2AP42771 156 aaKnown RBP13.48□□□□□ -0.25
SEC13-215ENST00000477547 FOXG1P55316 489 aaPredicted RBP13.48□□□□□ -0.25
SEC13-215ENST00000477547 SH3BGRP55822 239 aaPredicted RBP13.48□□□□□ -0.25
SEC13-215ENST00000477547 CRMP1Q14194 572 aa13.48□□□□□ -0.25
SEC13-215ENST00000477547 P2RY6Q15077 328 aa13.48□□□□□ -0.25
SEC13-215ENST00000477547 FBXW10Q5XX13 1052 aa13.48□□□□□ -0.25
SEC13-215ENST00000477547 ACSM5Q6NUN0 579 aa13.48□□□□□ -0.25
SEC13-215ENST00000477547 CYB561A3Q8NBI2 242 aa13.48□□□□□ -0.25
SEC13-215ENST00000477547 SLC37A3Q8NCC5 494 aa13.48□□□□□ -0.25
SEC13-215ENST00000477547 KISS1RQ969F8 398 aaPredicted RBP13.48□□□□□ -0.25
SEC13-215ENST00000477547 MCHR2Q969V1 340 aa13.48□□□□□ -0.25
SEC13-215ENST00000477547 NMD3Q96D46 503 aaKnown RBP13.48□□□□□ -0.25
SEC13-215ENST00000477547 RDH12Q96NR8 316 aa13.48□□□□□ -0.25
SEC13-215ENST00000477547 SNX18Q96RF0 628 aa13.48□□□□□ -0.25
SEC13-215ENST00000477547 VCX3BQ9H321 246 aa13.48□□□□□ -0.25
SEC13-215ENST00000477547 ELOVL5Q9NYP7 299 aa13.48□□□□□ -0.25
SEC13-215ENST00000477547 VSX1Q9NZR4 365 aaPredicted RBP13.48□□□□□ -0.25
SEC13-215ENST00000477547 ZFHX3Q15911 3703 aa13.48□□□□□ -0.25
SEC13-215ENST00000477547 SETD2Q9BYW2 2564 aaPredicted RBP13.47□□□□□ -0.25
SEC13-215ENST00000477547 CSMD2Q7Z408 3487 aa13.47□□□□□ -0.25
SEC13-215ENST00000477547 PDZD2O15018 2839 aa13.47□□□□□ -0.25
SEC13-215ENST00000477547 RPL36A-HNRNPH2H7BZ11 118 aa13.47□□□□□ -0.25
SEC13-215ENST00000477547 M0R129 80 aa13.47□□□□□ -0.25
SEC13-215ENST00000477547 SURF4O15260 269 aa13.47□□□□□ -0.25
SEC13-215ENST00000477547 DHHO43323 396 aa13.47□□□□□ -0.25
SEC13-215ENST00000477547 AHCYL1O43865 530 aa13.47□□□□□ -0.25
SEC13-215ENST00000477547 RAD51DO75771 328 aa13.47□□□□□ -0.25
SEC13-215ENST00000477547 HMGN1P05114 100 aa13.47□□□□□ -0.25
SEC13-215ENST00000477547 CTLA4P16410 223 aa13.47□□□□□ -0.25
SEC13-215ENST00000477547 PSMB1P20618 241 aaKnown RBP13.47□□□□□ -0.25
SEC13-215ENST00000477547 ZNF84P51523 738 aa13.47□□□□□ -0.25
SEC13-215ENST00000477547 TFF3Q07654 80 aa13.47□□□□□ -0.25
SEC13-215ENST00000477547 TSC22D1Q15714 1073 aa13.47□□□□□ -0.25
SEC13-215ENST00000477547 C12orf73Q69YU5 71 aa13.47□□□□□ -0.25
SEC13-215ENST00000477547 DNM1P34Q6PK57 102 aa13.47□□□□□ -0.25
SEC13-215ENST00000477547 STAC2Q6ZMT1 411 aa13.47□□□□□ -0.25
SEC13-215ENST00000477547 NSMAFQ92636 917 aa13.47□□□□□ -0.25
SEC13-215ENST00000477547 ZNF837Q96EG3 531 aaPredicted RBP13.47□□□□□ -0.25
SEC13-215ENST00000477547 RBP7Q96R05 134 aa13.47□□□□□ -0.25
SEC13-215ENST00000477547 RERGLQ9H628 205 aa13.47□□□□□ -0.25
SEC13-215ENST00000477547 RPRD1BQ9NQG5 326 aaKnown RBP13.47□□□□□ -0.25
SEC13-215ENST00000477547 IGKV1D-43A0A0B4J1Z2 117 aa13.46□□□□□ -0.25
SEC13-215ENST00000477547 CIB4A0PJX0 185 aa13.46□□□□□ -0.25
SEC13-215ENST00000477547 OR6C68A6NDL8 312 aa13.46□□□□□ -0.25
SEC13-215ENST00000477547 ZNF99A8MXY4 864 aaPredicted RBP13.46□□□□□ -0.25
SEC13-215ENST00000477547 B4GALT1P15291 398 aa13.46□□□□□ -0.25
SEC13-215ENST00000477547 PAICSP22234 425 aaKnown RBP13.46□□□□□ -0.25
SEC13-215ENST00000477547 PTDSS1P48651 473 aaKnown RBP13.46□□□□□ -0.25
SEC13-215ENST00000477547 ZNF133P52736 654 aaPredicted RBP13.46□□□□□ -0.25
SEC13-215ENST00000477547 TGFBR3Q03167 851 aa13.46□□□□□ -0.25
SEC13-215ENST00000477547 FAM27E3Q08E93 113 aa13.46□□□□□ -0.25
SEC13-215ENST00000477547 STK11Q15831 433 aa13.46□□□□□ -0.25
SEC13-215ENST00000477547 SNAPC1Q16533 368 aa13.46□□□□□ -0.25
SEC13-215ENST00000477547 THEM4Q5T1C6 240 aa13.46□□□□□ -0.25
SEC13-215ENST00000477547 C10orf128Q5T292 105 aa13.46□□□□□ -0.25
SEC13-215ENST00000477547 SFRP5Q5T4F7 317 aa13.46□□□□□ -0.25
SEC13-215ENST00000477547 LRFN4Q6PJG9 635 aa13.46□□□□□ -0.25
SEC13-215ENST00000477547 BHLHA15Q7RTS1 189 aaPredicted RBP13.46□□□□□ -0.25
SEC13-215ENST00000477547 ZNF433Q8N7K0 673 aaPredicted RBP13.46□□□□□ -0.25
SEC13-215ENST00000477547 NPEPL1Q8NDH3 523 aa13.46□□□□□ -0.25
SEC13-215ENST00000477547 C1orf162Q8NEQ5 155 aaPredicted RBP13.46□□□□□ -0.25
SEC13-215ENST00000477547 OR9Q1Q8NGQ5 310 aa13.46□□□□□ -0.25
SEC13-215ENST00000477547 FAM81AQ8TBF8 368 aa13.46□□□□□ -0.25
SEC13-215ENST00000477547 PITX2Q99697 317 aa13.46□□□□□ -0.25
SEC13-215ENST00000477547 FOXB1Q99853 325 aa13.46□□□□□ -0.25
SEC13-215ENST00000477547 GRIP2Q9C0E4 1043 aa13.46□□□□□ -0.25
SEC13-215ENST00000477547 NUAK2Q9H093 628 aa13.46□□□□□ -0.25
SEC13-215ENST00000477547 NPDC1Q9NQX5 325 aaPredicted RBP13.46□□□□□ -0.25
SEC13-215ENST00000477547 TVP23BQ9NYZ1 205 aa13.46□□□□□ -0.25
SEC13-215ENST00000477547 GPR52Q9Y2T5 361 aa13.46□□□□□ -0.25
SEC13-215ENST00000477547 ANKHD1Q8IWZ3 2542 aaKnown RBP13.45□□□□□ -0.26
SEC13-215ENST00000477547 A0A1W2PPL8 197 aa13.45□□□□□ -0.26
SEC13-215ENST00000477547 FAM183AA6NL82 134 aa13.45□□□□□ -0.26
SEC13-215ENST00000477547 C16orf97H3BN30 126 aa13.45□□□□□ -0.26
SEC13-215ENST00000477547 DLGAP1O14490 977 aa13.45□□□□□ -0.26
SEC13-215ENST00000477547 SLC16A7O60669 478 aa13.45□□□□□ -0.26
SEC13-215ENST00000477547 HOXC12P31275 282 aa13.45□□□□□ -0.26
SEC13-215ENST00000477547 GGT2P36268 569 aa13.45□□□□□ -0.26
SEC13-215ENST00000477547 UGT2B10P36537 528 aa13.45□□□□□ -0.26
SEC13-215ENST00000477547 CDC42P60953 191 aa13.45□□□□□ -0.26
SEC13-215ENST00000477547 ARF1P84077 181 aaKnown RBP13.45□□□□□ -0.26
SEC13-215ENST00000477547 SORDQ00796 357 aa13.45□□□□□ -0.26
SEC13-215ENST00000477547 ZNF362Q5T0B9 420 aaPredicted RBP13.45□□□□□ -0.26
SEC13-215ENST00000477547 SLC25A47Q6Q0C1 308 aa13.45□□□□□ -0.26
SEC13-215ENST00000477547 KLHL24Q6TFL4 600 aa13.45□□□□□ -0.26
SEC13-215ENST00000477547 ZNF555Q8NEP9 628 aa13.45□□□□□ -0.26
SEC13-215ENST00000477547 OR1K1Q8NGR3 316 aa13.45□□□□□ -0.26
SEC13-215ENST00000477547 OTULINQ96BN8 352 aa13.45□□□□□ -0.26
SEC13-215ENST00000477547 TSSK2Q96PF2 358 aa13.45□□□□□ -0.26
SEC13-215ENST00000477547 ACTR6Q9GZN1 396 aa13.45□□□□□ -0.26
SEC13-215ENST00000477547 IMPAD1Q9NX62 359 aa13.45□□□□□ -0.26
SEC13-215ENST00000477547 UGT2A1Q9Y4X1 527 aa13.45□□□□□ -0.26
SEC13-215ENST00000477547 KLF2Q9Y5W3 355 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms