RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 RUFY3Q7L099 469 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 ASCL5Q7RTU5 278 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 OAFQ86UD1 273 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 UBE2J2Q8N2K1 259 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 ZNF561Q8N587 486 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 OR5W2Q8NH69 310 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 UBALD1Q8TB05 177 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 SYNPRQ8TBG9 265 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 FRZBQ92765 325 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 PDXPQ96GD0 296 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 OR2A5Q96R48 311 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 P2RX4Q99571 388 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 ZNF430Q9H8G1 570 aaPredicted RBP1.93□□□□□ -2.1
TARDBP-208ENST00000477447 ZNF629Q9UEG4 869 aaPredicted RBP1.93□□□□□ -2.1
TARDBP-208ENST00000477447 MRPS18BQ9Y676 258 aaKnown RBP1.93□□□□□ -2.1
TARDBP-208ENST00000477447 KANK1Q14678 1352 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 LRP4O75096 1905 aa1.93□□□□□ -2.1
TARDBP-208ENST00000477447 COL4A4P53420 1690 aaPredicted RBP1.93□□□□□ -2.1
TARDBP-208ENST00000477447 CENPJQ9HC77 1338 aaPredicted RBP1.92□□□□□ -2.1
TARDBP-208ENST00000477447 TRAV39A0A0B4J263 110 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 H0YHG0 523 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 GABARAPO95166 117 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 UTS2O95399 124 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 AIFM1O95831 613 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 C6orf47O95873 294 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 RHOXF2BP0C7M4 288 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 FOLR1P15328 257 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 HNRNPH3P31942 346 aaKnown RBP1.92□□□□□ -2.1
TARDBP-208ENST00000477447 CASP14P31944 242 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 CRYBB2P43320 205 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 PLP1P60201 277 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 YWHAGP61981 247 aaKnown RBP eCLIP1.92□□□□□ -2.1
TARDBP-208ENST00000477447 ACTG2P63267 376 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 BST1Q10588 318 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 ERCC8Q13216 396 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 GINS1Q14691 196 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 ZSCAN26Q16670 478 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 ABCA11PQ4W5N1 156 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 CCDC73Q6ZRK6 1079 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 ABHD13Q7L211 337 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 TMEM135Q86UB9 458 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 EID2Q8N6I1 236 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 HSD17B11Q8NBQ5 300 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 OR13C2Q8NGS9 318 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 OR4S2Q8NH73 311 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 CXorf40AQ8TE69 158 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 NT5C3BQ969T7 300 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 FAM3DQ96BQ1 224 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 TCHPQ9BT92 498 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 CHAC1Q9BUX1 264 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 LINC00597Q9H2U6 94 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 KLHL28Q9NXS3 571 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 EXTL2Q9UBQ6 330 aa1.92□□□□□ -2.1
TARDBP-208ENST00000477447 SLIT3O75094 1523 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 CNTNAP1P78357 1384 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 IGHV3-74A0A0B4J1X5 117 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 A0A1B0GVX0 72 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 TMEM150BA6NC51 233 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 SLC25A14O95258 325 aaPredicted RBP1.91□□□□□ -2.1
TARDBP-208ENST00000477447 GNAO1P09471 354 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 CT62P0C5K7 136 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 MCF2P10911 925 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 MAS1LP35410 378 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 GPX6P59796 221 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 MRPS22P82650 360 aaKnown RBP1.91□□□□□ -2.1
TARDBP-208ENST00000477447 BST2Q10589 180 aaKnown RBP1.91□□□□□ -2.1
TARDBP-208ENST00000477447 ECH1Q13011 328 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 MAB21L1Q13394 359 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 DDX39BQ13838 428 aaKnown RBP1.91□□□□□ -2.1
TARDBP-208ENST00000477447 MOBPQ13875 183 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 CLINT1Q14677 625 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 STK11Q15831 433 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 POU2AF1Q16633 256 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 C5orf47Q569G3 176 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 PRAMEF5Q5TYX0 476 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 PRAMEF6Q5VXH4 476 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 DUX4L9Q6RFH8 374 aaPredicted RBP1.91□□□□□ -2.1
TARDBP-208ENST00000477447 KDELC1Q6UW63 502 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 BIVMQ86UB2 503 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 PDIK1LQ8N165 341 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 MS4A15Q8N5U1 240 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 NECAB1Q8N987 351 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 OR2L3Q8NG85 312 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 OR1S2Q8NGQ3 325 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 OR10R2Q8NGX6 335 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 RHEBL1Q8TAI7 183 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 PLPPR1Q8TBJ4 325 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 PIBF1Q8WXW3 757 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 TUBGCP3Q96CW5 907 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 PIK3IP1Q96FE7 263 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 RPP21Q9H633 154 aaKnown RBP1.91□□□□□ -2.1
TARDBP-208ENST00000477447 SIRT7Q9NRC8 400 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 ETNK2Q9NVF9 386 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 COX16Q9P0S2 106 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 OPN4Q9UHM6 478 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 ING4Q9UNL4 249 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 PSG8Q9UQ74 426 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 ZNF835Q9Y2P0 537 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 ASB3Q9Y575 518 aa1.91□□□□□ -2.1
TARDBP-208ENST00000477447 PCM1Q15154 2024 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms