RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TESQ9UGI8 421 aaKnown RBP6.26□□□□□ -1.41
BRCA1-214ENST00000477152 SLC7A8Q9UHI5 535 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 IGHV2OR16-5A0A0B4J2B6 119 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 SH3PXD2BA1X283 911 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 TRIM77I1YAP6 450 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 M0R3G1 203 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 CLIC1O00299 241 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 NR5A2O00482 541 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 MT-ATP6P00846 226 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 HIST1H2ABP04908 130 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 ADRA2AP08913 450 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 ALDOCP09972 364 aaKnown RBP6.26□□□□□ -1.41
BRCA1-214ENST00000477152 CREB1P16220 341 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 NR4A1P22736 598 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 SLC6A2P23975 617 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 EPHA3P29320 983 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 P2RY4P51582 365 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 PMS2P3Q13401 168 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 RGNQ15493 299 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 PCGF3Q3KNV8 242 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 MALRD1Q5VYJ5 2156 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 REEP3Q6NUK4 255 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 TMEM53Q6P2H8 277 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 ZNF813Q6ZN06 617 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 HIST3H2AQ7L7L0 130 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 HDDC2Q7Z4H3 204 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 SERPINA11Q86U17 422 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 ANKRD42Q8N9B4 389 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 FAM156AQ8NDB6 213 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 OR51F2Q8NH61 342 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 STON2Q8WXE9 905 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 HIST1H2ACQ93077 130 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 MRPL24Q96A35 216 aaKnown RBP6.26□□□□□ -1.41
BRCA1-214ENST00000477152 SNX18Q96RF0 628 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 ULBP2Q9BZM5 246 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 KCNN2Q9H2S1 579 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 MXRA5Q9NR99 2828 aa6.26□□□□□ -1.41
BRCA1-214ENST00000477152 A0A1W2PPW3 197 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 FTCDNL1E5RQL4 147 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 KITP10721 976 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 GRPRP30550 384 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 CALCRP30988 508 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 SLC18A1P54219 525 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 TUBA1BP68363 451 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 TUBA4AP68366 448 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 PLP2Q04941 152 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 GCNT6Q5T4J0 391 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 KRT80Q6KB66 452 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 TMEM154Q6P9G4 183 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 DHRS4L2Q6PKH6 230 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 DEF8Q6ZN54 512 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 IL17RELQ6ZVW7 336 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 TUBA1AQ71U36 451 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 PIWIL3Q7Z3Z3 882 aaKnown RBP6.25□□□□□ -1.41
BRCA1-214ENST00000477152 MDP1Q86V88 176 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 MEX3DQ86XN8 651 aaKnown RBP6.25□□□□□ -1.41
BRCA1-214ENST00000477152 C20orf196Q8IYI0 205 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 C1orf174Q8IYL3 243 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 CLIP4Q8N3C7 705 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 CPEB3Q8NE35 698 aaKnown RBP6.25□□□□□ -1.41
BRCA1-214ENST00000477152 RAB39BQ96DA2 213 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 TEX37Q96LM6 180 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 OR2M2Q96R28 347 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 NOX3Q9HBY0 568 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 SLC52A3Q9NQ40 469 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 SDR39U1Q9NRG7 319 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-214ENST00000477152 SLCO1C1Q9NYB5 712 aa6.25□□□□□ -1.41
BRCA1-214ENST00000477152 STX18Q9P2W9 335 aaKnown RBP6.25□□□□□ -1.41
BRCA1-214ENST00000477152 LRP5LA4QPB2 252 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 POLR3GO15318 223 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-214ENST00000477152 FZD7O75084 574 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 SAGP10523 405 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-214ENST00000477152 NR2C1P13056 603 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 AHCYP23526 432 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 IL12AP29459 219 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 RAD52P43351 418 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 PTDSS1P48651 473 aaKnown RBP6.24□□□□□ -1.41
BRCA1-214ENST00000477152 CSNK1A1P48729 337 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 RGS8P57771 180 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-214ENST00000477152 RAB1AP62820 205 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 ACTG1P63261 375 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 MYBPC1Q00872 1141 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 HGFACQ04756 655 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 PUDPQ08623 228 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 RIN1Q13671 783 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 GLIPR1L2Q4G1C9 344 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 RGS7BPQ6MZT1 257 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-214ENST00000477152 ZNF627Q7L945 461 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 PXKQ7Z7A4 578 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 SLC30A8Q8IWU4 369 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 C11orf40Q8WZ69 217 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 TMEM186Q96B77 213 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 KTI12Q96EK9 354 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-214ENST00000477152 TIMD4Q96H15 378 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 TMEM43Q9BTV4 400 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 RBM4Q9BWF3 364 aaKnown RBP6.24□□□□□ -1.41
BRCA1-214ENST00000477152 C20orf27Q9GZN8 174 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 RABEP2Q9H5N1 569 aa6.24□□□□□ -1.41
BRCA1-214ENST00000477152 WDR55Q9H6Y2 383 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-214ENST00000477152 RNF121Q9H920 327 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms