RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 J3QLW9 94 aa12.85□□□□□ -0.35
COL4A6-206ENST00000477085 PSMD9O00233 223 aa12.85□□□□□ -0.35
COL4A6-206ENST00000477085 ZNF19P17023 458 aa12.85□□□□□ -0.35
COL4A6-206ENST00000477085 PEX19P40855 299 aa12.85□□□□□ -0.35
COL4A6-206ENST00000477085 RPS25P62851 125 aaKnown RBP12.85□□□□□ -0.35
COL4A6-206ENST00000477085 SRYQ05066 204 aa12.85□□□□□ -0.35
COL4A6-206ENST00000477085 CDONQ4KMG0 1287 aa12.85□□□□□ -0.35
COL4A6-206ENST00000477085 TP53I3Q53FA7 332 aa12.85□□□□□ -0.35
COL4A6-206ENST00000477085 PHYHD1Q5SRE7 291 aa12.85□□□□□ -0.35
COL4A6-206ENST00000477085 LRFN4Q6PJG9 635 aa12.85□□□□□ -0.35
COL4A6-206ENST00000477085 TMPRSS11AQ6ZMR5 421 aa12.85□□□□□ -0.35
COL4A6-206ENST00000477085 ALDH16A1Q8IZ83 802 aa12.85□□□□□ -0.35
COL4A6-206ENST00000477085 AMELYQ99218 206 aa12.85□□□□□ -0.35
COL4A6-206ENST00000477085 CHCHD6Q9BRQ6 235 aa12.85□□□□□ -0.35
COL4A6-206ENST00000477085 ZNF593O00488 134 aaPredicted RBP12.84□□□□□ -0.35
COL4A6-206ENST00000477085 ZNF432O94892 652 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 VAMP5O95183 116 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 GAAP10253 952 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 ALOX5APP20292 161 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 CRABP1P29762 137 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 CENPAP49450 140 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 C3AR1Q16581 482 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 IGFL3Q6UXB1 125 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 RPTNQ6XPR3 784 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 VASH1Q7L8A9 365 aaPredicted RBP12.84□□□□□ -0.35
COL4A6-206ENST00000477085 DPY19L4Q7Z388 723 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 NEIL3Q8TAT5 605 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 NSMAFQ92636 917 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 ABTB1Q969K4 478 aaPredicted RBP12.84□□□□□ -0.35
COL4A6-206ENST00000477085 TMEM203Q969S6 136 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 DCLRE1CQ96SD1 692 aaKnown RBP12.84□□□□□ -0.35
COL4A6-206ENST00000477085 INTS14Q96SY0 518 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 TM9SF2Q99805 663 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 BCL7BQ9BQE9 202 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 SPRR3Q9UBC9 169 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 GRIP1Q9Y3R0 1128 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 PCDHGB7Q9Y5F8 929 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 TRAV17A0A0B4J275 112 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 LOC100506127A0A0U1RQW1 187 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 NOL3O60936 208 aaKnown RBP12.84□□□□□ -0.35
COL4A6-206ENST00000477085 IGHG1P01857 330 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 MT-ND5P03915 603 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 ABLIM2Q6H8Q1 611 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 SLC25A47Q6Q0C1 308 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.84□□□□□ -0.35
COL4A6-206ENST00000477085 TMEM123Q8N131 208 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 NOXO1Q8NFA2 376 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 SLC26A10Q8NG04 563 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 OR6N2Q8NGY6 317 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 MCHR2Q969V1 340 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 DTNBP1Q96EV8 351 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 PELI1Q96FA3 418 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 OR2M2Q96R28 347 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 SF3B5Q9BWJ5 86 aaKnown RBP12.84□□□□□ -0.35
COL4A6-206ENST00000477085 KCNG2Q9UJ96 466 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 SPTBN4Q9H254 2564 aa12.84□□□□□ -0.35
COL4A6-206ENST00000477085 TNRC6AQ8NDV7 1962 aaKnown RBP12.83□□□□□ -0.36
COL4A6-206ENST00000477085 BOD1L1Q8NFC6 3051 aa12.83□□□□□ -0.36
COL4A6-206ENST00000477085 APC2O95996 2303 aa12.83□□□□□ -0.36
COL4A6-206ENST00000477085 ZNF726A6NNF4 738 aa12.83□□□□□ -0.36
COL4A6-206ENST00000477085 NPIPA2E9PIF3 369 aa12.83□□□□□ -0.36
COL4A6-206ENST00000477085 NPIPA3F8WFD2 350 aa12.83□□□□□ -0.36
COL4A6-206ENST00000477085 HLA-DQA2P01906 255 aa12.83□□□□□ -0.36
COL4A6-206ENST00000477085 CELP19835 753 aa12.83□□□□□ -0.36
COL4A6-206ENST00000477085 SELENOPP49908 381 aa12.83□□□□□ -0.36
COL4A6-206ENST00000477085 CLRN1P58418 232 aa12.83□□□□□ -0.36
COL4A6-206ENST00000477085 LSAMPQ13449 338 aa12.83□□□□□ -0.36
COL4A6-206ENST00000477085 INSL4Q14641 139 aa12.83□□□□□ -0.36
COL4A6-206ENST00000477085 THEM4Q5T1C6 240 aa12.83□□□□□ -0.36
COL4A6-206ENST00000477085 LRRC69Q6ZNQ3 347 aa12.83□□□□□ -0.36
COL4A6-206ENST00000477085 PLEKHG7Q6ZR37 379 aa12.83□□□□□ -0.36
COL4A6-206ENST00000477085 ABHD3Q8WU67 409 aa12.83□□□□□ -0.36
COL4A6-206ENST00000477085 UFD1Q92890 307 aa12.83□□□□□ -0.36
COL4A6-206ENST00000477085 ZHX1-C8orf76Q96EF9 292 aa12.83□□□□□ -0.36
COL4A6-206ENST00000477085 ADAD1Q96M93 576 aaKnown RBP12.83□□□□□ -0.36
COL4A6-206ENST00000477085 RBP7Q96R05 134 aa12.83□□□□□ -0.36
COL4A6-206ENST00000477085 ACOXLQ9NUZ1 547 aa12.83□□□□□ -0.36
COL4A6-206ENST00000477085 MRM2Q9UI43 246 aaKnown RBP12.83□□□□□ -0.36
COL4A6-206ENST00000477085 PCDHGA9Q9Y5G4 932 aaKnown RBP12.83□□□□□ -0.36
COL4A6-206ENST00000477085 FLVCR1Q9Y5Y0 555 aa12.83□□□□□ -0.36
COL4A6-206ENST00000477085 TRGV5A0A0B4J1U4 118 aa12.82□□□□□ -0.36
COL4A6-206ENST00000477085 ZNF670-ZNF695F2Z2N8 137 aa12.82□□□□□ -0.36
COL4A6-206ENST00000477085 ACOT7O00154 380 aa12.82□□□□□ -0.36
COL4A6-206ENST00000477085 SLC22A1O15245 554 aa12.82□□□□□ -0.36
COL4A6-206ENST00000477085 ZNHIT1O43257 154 aa12.82□□□□□ -0.36
COL4A6-206ENST00000477085 AKAP8O43823 692 aaKnown RBP12.82□□□□□ -0.36
COL4A6-206ENST00000477085 CYTIPO60759 359 aa12.82□□□□□ -0.36
COL4A6-206ENST00000477085 KHDRBS3O75525 346 aaKnown RBP12.82□□□□□ -0.36
COL4A6-206ENST00000477085 WNT11O96014 354 aa12.82□□□□□ -0.36
COL4A6-206ENST00000477085 FABP5Q01469 135 aa12.82□□□□□ -0.36
COL4A6-206ENST00000477085 BDH1Q02338 343 aa12.82□□□□□ -0.36
COL4A6-206ENST00000477085 HSF2Q03933 536 aa12.82□□□□□ -0.36
COL4A6-206ENST00000477085 GLO1Q04760 184 aa12.82□□□□□ -0.36
COL4A6-206ENST00000477085 BCL2A1Q16548 175 aa12.82□□□□□ -0.36
COL4A6-206ENST00000477085 SYS1Q8N2H4 156 aa12.82□□□□□ -0.36
COL4A6-206ENST00000477085 OTOSQ8NHW6 89 aa12.82□□□□□ -0.36
COL4A6-206ENST00000477085 SNX33Q8WV41 574 aa12.82□□□□□ -0.36
COL4A6-206ENST00000477085 HTRA1Q92743 480 aa12.82□□□□□ -0.36
COL4A6-206ENST00000477085 TMEM54Q969K7 222 aa12.82□□□□□ -0.36
COL4A6-206ENST00000477085 CPNE4Q96A23 557 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms