RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 SNRNP27Q8WVK2 155 aaKnown RBP25.62■■□□□ 1.69
VEGFA-211ENST00000476772 NSMAFQ92636 917 aa25.62■■□□□ 1.69
VEGFA-211ENST00000476772 ISOC1Q96CN7 298 aa25.62■■□□□ 1.69
VEGFA-211ENST00000476772 INTS14Q96SY0 518 aa25.62■■□□□ 1.69
VEGFA-211ENST00000476772 ISG20L2Q9H9L3 353 aaKnown RBP25.62■■□□□ 1.69
VEGFA-211ENST00000476772 MCTS1Q9ULC4 181 aaKnown RBP25.62■■□□□ 1.69
VEGFA-211ENST00000476772 CAMK2AQ9UQM7 478 aa25.62■■□□□ 1.69
VEGFA-211ENST00000476772 ANKRD11Q6UB99 2663 aaPredicted RBP25.62■■□□□ 1.69
VEGFA-211ENST00000476772 KHDRBS3O75525 346 aaKnown RBP25.61■■□□□ 1.69
VEGFA-211ENST00000476772 CD36P16671 472 aa25.61■■□□□ 1.69
VEGFA-211ENST00000476772 BLVRAP53004 296 aa25.61■■□□□ 1.69
VEGFA-211ENST00000476772 GLO1Q04760 184 aa25.61■■□□□ 1.69
VEGFA-211ENST00000476772 HIST3H3Q16695 136 aa25.61■■□□□ 1.69
VEGFA-211ENST00000476772 UNQ6494/PRO21346Q6UXR6 183 aa25.61■■□□□ 1.69
VEGFA-211ENST00000476772 TMEM123Q8N131 208 aa25.61■■□□□ 1.69
VEGFA-211ENST00000476772 OR6N2Q8NGY6 317 aa25.61■■□□□ 1.69
VEGFA-211ENST00000476772 ARHGAP9Q9BRR9 750 aa25.61■■□□□ 1.69
VEGFA-211ENST00000476772 MRPL22Q9NWU5 206 aaKnown RBP25.61■■□□□ 1.69
VEGFA-211ENST00000476772 ING1Q9UK53 422 aaPredicted RBP25.61■■□□□ 1.69
VEGFA-211ENST00000476772 IGF2RP11717 2491 aa25.61■■□□□ 1.69
VEGFA-211ENST00000476772 PTPRQQ9UMZ3 2332 aa25.61■■□□□ 1.69
VEGFA-211ENST00000476772 A0A1B0GVC2 190 aa25.61■■□□□ 1.69
VEGFA-211ENST00000476772 ZNF432O94892 652 aa25.61■■□□□ 1.69
VEGFA-211ENST00000476772 SCG5P05408 212 aa25.61■■□□□ 1.69
VEGFA-211ENST00000476772 PTGS2P35354 604 aa25.61■■□□□ 1.69
VEGFA-211ENST00000476772 SELENOPP49908 381 aa25.61■■□□□ 1.69
VEGFA-211ENST00000476772 MLLT11Q13015 90 aaPredicted RBP25.61■■□□□ 1.69
VEGFA-211ENST00000476772 RPUSD3Q6P087 351 aaKnown RBP25.61■■□□□ 1.69
VEGFA-211ENST00000476772 TMPRSS11AQ6ZMR5 421 aa25.61■■□□□ 1.69
VEGFA-211ENST00000476772 FNDC9Q8TBE3 224 aa25.61■■□□□ 1.69
VEGFA-211ENST00000476772 RNF128Q8TEB7 428 aa25.61■■□□□ 1.69
VEGFA-211ENST00000476772 LUZP4Q9P127 313 aa25.61■■□□□ 1.69
VEGFA-211ENST00000476772 CENPBD1B2RD01 187 aa25.6■■□□□ 1.69
VEGFA-211ENST00000476772 PSKH1P11801 424 aa25.6■■□□□ 1.69
VEGFA-211ENST00000476772 RGS6P49758 472 aa25.6■■□□□ 1.69
VEGFA-211ENST00000476772 CHMP1BQ7LBR1 199 aa25.6■■□□□ 1.69
VEGFA-211ENST00000476772 ZSCAN2Q7Z7L9 614 aaPredicted RBP25.6■■□□□ 1.69
VEGFA-211ENST00000476772 CDC20BQ86Y33 519 aa25.6■■□□□ 1.69
VEGFA-211ENST00000476772 ZNF420Q8TAQ5 688 aaPredicted RBP25.6■■□□□ 1.69
VEGFA-211ENST00000476772 MCHR2Q969V1 340 aa25.6■■□□□ 1.69
VEGFA-211ENST00000476772 AQP7O14520 342 aa25.59■■□□□ 1.69
VEGFA-211ENST00000476772 AKAP8O43823 692 aaKnown RBP25.59■■□□□ 1.69
VEGFA-211ENST00000476772 AQP8O94778 261 aa25.59■■□□□ 1.69
VEGFA-211ENST00000476772 MPZL1O95297 269 aa25.59■■□□□ 1.69
VEGFA-211ENST00000476772 LALBAP00709 142 aa25.59■■□□□ 1.69
VEGFA-211ENST00000476772 NTF4P34130 210 aa25.59■■□□□ 1.69
VEGFA-211ENST00000476772 RPS27P42677 84 aaKnown RBP25.59■■□□□ 1.69
VEGFA-211ENST00000476772 CSNK1A1P48729 337 aa25.59■■□□□ 1.69
VEGFA-211ENST00000476772 MEP1BQ16820 701 aa25.59■■□□□ 1.69
VEGFA-211ENST00000476772 SLC25A47Q6Q0C1 308 aa25.59■■□□□ 1.69
VEGFA-211ENST00000476772 SLC16A12Q6ZSM3 486 aa25.59■■□□□ 1.69
VEGFA-211ENST00000476772 ANKRD13BQ86YJ7 626 aa25.59■■□□□ 1.69
VEGFA-211ENST00000476772 FNDC8Q8TC99 324 aa25.59■■□□□ 1.69
VEGFA-211ENST00000476772 TMEM54Q969K7 222 aa25.59■■□□□ 1.69
VEGFA-211ENST00000476772 PLSCR2Q9NRY7 297 aa25.59■■□□□ 1.69
VEGFA-211ENST00000476772 GLTPQ9NZD2 209 aa25.59■■□□□ 1.69
VEGFA-211ENST00000476772 ENPP5Q9UJA9 477 aa25.59■■□□□ 1.69
VEGFA-211ENST00000476772 KLHDC2Q9Y2U9 406 aa25.59■■□□□ 1.69
VEGFA-211ENST00000476772 QDPRP09417 244 aa25.58■■□□□ 1.69
VEGFA-211ENST00000476772 GAAP10253 952 aa25.58■■□□□ 1.69
VEGFA-211ENST00000476772 NR4A1P22736 598 aa25.58■■□□□ 1.69
VEGFA-211ENST00000476772 INAQ16352 499 aa25.58■■□□□ 1.69
VEGFA-211ENST00000476772 SSX1Q16384 188 aa25.58■■□□□ 1.69
VEGFA-211ENST00000476772 CNPY1Q3B7I2 92 aa25.58■■□□□ 1.69
VEGFA-211ENST00000476772 DPY19L4Q7Z388 723 aa25.58■■□□□ 1.69
VEGFA-211ENST00000476772 P2RY8Q86VZ1 359 aa25.58■■□□□ 1.69
VEGFA-211ENST00000476772 SLC26A10Q8NG04 563 aa25.58■■□□□ 1.69
VEGFA-211ENST00000476772 OR6N1Q8NGY5 312 aa25.58■■□□□ 1.69
VEGFA-211ENST00000476772 PRRG4Q9BZD6 226 aa25.58■■□□□ 1.69
VEGFA-211ENST00000476772 YIPF3Q9GZM5 350 aa25.58■■□□□ 1.69
VEGFA-211ENST00000476772 RCE1Q9Y256 329 aa25.58■■□□□ 1.69
VEGFA-211ENST00000476772 ZNF670-ZNF695F2Z2N8 137 aa25.58■■□□□ 1.68
VEGFA-211ENST00000476772 TMBIM6P55061 237 aa25.58■■□□□ 1.68
VEGFA-211ENST00000476772 PHYHD1Q5SRE7 291 aa25.58■■□□□ 1.68
VEGFA-211ENST00000476772 LRFN4Q6PJG9 635 aa25.58■■□□□ 1.68
VEGFA-211ENST00000476772 KLBQ86Z14 1044 aa25.58■■□□□ 1.68
VEGFA-211ENST00000476772 ZCCHC14Q8WYQ9 949 aaKnown RBP25.58■■□□□ 1.68
VEGFA-211ENST00000476772 C12orf43Q96C57 262 aaKnown RBP25.58■■□□□ 1.68
VEGFA-211ENST00000476772 C4orf36Q96KX1 117 aa25.58■■□□□ 1.68
VEGFA-211ENST00000476772 DOK1Q99704 481 aa25.58■■□□□ 1.68
VEGFA-211ENST00000476772 PRDM14Q9GZV8 571 aa25.58■■□□□ 1.68
VEGFA-211ENST00000476772 ISYNA1Q9NPH2 558 aa25.58■■□□□ 1.68
VEGFA-211ENST00000476772 ZNF71Q9NQZ8 489 aaPredicted RBP25.58■■□□□ 1.68
VEGFA-211ENST00000476772 ZMIZ1Q9ULJ6 1067 aa25.58■■□□□ 1.68
VEGFA-211ENST00000476772 IGKV3D-15A0A087WSY6 115 aa25.57■■□□□ 1.68
VEGFA-211ENST00000476772 CCRL2O00421 344 aa25.57■■□□□ 1.68
VEGFA-211ENST00000476772 MAGEB4O15481 346 aaPredicted RBP25.57■■□□□ 1.68
VEGFA-211ENST00000476772 ZNHIT1O43257 154 aa25.57■■□□□ 1.68
VEGFA-211ENST00000476772 OR12D2P58182 307 aa25.57■■□□□ 1.68
VEGFA-211ENST00000476772 ADAM8P78325 824 aa25.57■■□□□ 1.68
VEGFA-211ENST00000476772 HSF2Q03933 536 aa25.57■■□□□ 1.68
VEGFA-211ENST00000476772 GLB1L2Q8IW92 636 aa25.57■■□□□ 1.68
VEGFA-211ENST00000476772 PNPLA2Q96AD5 504 aa25.57■■□□□ 1.68
VEGFA-211ENST00000476772 KLHL9Q9P2J3 617 aa25.57■■□□□ 1.68
VEGFA-211ENST00000476772 FOXD3Q9UJU5 478 aaPredicted RBP25.57■■□□□ 1.68
VEGFA-211ENST00000476772 NCOR2Q9Y618 2525 aa25.57■■□□□ 1.68
VEGFA-211ENST00000476772 H3BMQ9 156 aa25.56■■□□□ 1.68
VEGFA-211ENST00000476772 J3QLW9 94 aa25.56■■□□□ 1.68
VEGFA-211ENST00000476772 ZNF701M0R085 212 aaPredicted RBP25.56■■□□□ 1.68
VEGFA-211ENST00000476772 ZNF593O00488 134 aaPredicted RBP25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms