RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 MSL2Q9HCI7 577 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 TCF7L2Q9NQB0 619 aa10.12□□□□□ -0.79
HDAC6-219ENST00000476625 LOC100509620A0A075B734 347 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 TMEM247A6NEH6 219 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 TM9SF1O15321 606 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 HDAC3O15379 428 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 RGS16O15492 202 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-219ENST00000476625 SLC2A10O95528 541 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 MMP7P09237 267 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-219ENST00000476625 IGHV4-38-2P0DP08 117 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 PRTN3P24158 256 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 NCALDP61601 193 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 CDK6Q00534 326 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 FMODQ06828 376 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 BAMBIQ13145 260 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 PCGF3Q3KNV8 242 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 ARMCX4Q5H9R4 360 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 PABPC1L2AQ5JQF8 200 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 PAGE3Q5JUK9 113 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 GCNT6Q5T4J0 391 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 FAM91A1Q658Y4 838 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 C5orf46Q6UWT4 87 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 DOK3Q7L591 496 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 SLC16A14Q7RTX9 510 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 SYT14Q8NB59 555 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 GLB1L3Q8NCI6 653 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-219ENST00000476625 VANGL1Q8TAA9 524 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-219ENST00000476625 SLC25A40Q8TBP6 338 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 DNAJA4Q8WW22 397 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-219ENST00000476625 C11orf40Q8WZ69 217 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 MAELQ96JY0 434 aaKnown RBP10.11□□□□□ -0.79
HDAC6-219ENST00000476625 SDR39U1Q9NRG7 319 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-219ENST00000476625 TNFRSF19Q9NS68 423 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 NKIRAS2Q9NYR9 191 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 VAPAQ9P0L0 249 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 TESQ9UGI8 421 aaKnown RBP10.11□□□□□ -0.79
HDAC6-219ENST00000476625 EGFL7Q9UHF1 273 aa10.11□□□□□ -0.79
HDAC6-219ENST00000476625 RNF13O43567 381 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 MGRN1O60291 552 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 SNNO75324 88 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-219ENST00000476625 MFN2O95140 757 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 NGFP01138 241 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 IGHV3-13P01766 116 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 IGHV2-70P01814 119 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 F13BP05160 661 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 SBK2P0C263 348 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 IDO1P14902 403 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 ETS2P15036 469 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 DRD4P21917 467 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 FPR2P25090 351 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 ZNF154Q13106 437 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 SLC9A3R2Q15599 337 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 ZNF74Q16587 644 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 TBC1D28Q2M2D7 210 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 TMEM53Q6P2H8 277 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 CLDN22Q8N7P3 220 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 RBM15BQ8NDT2 890 aaKnown RBP10.1□□□□□ -0.79
HDAC6-219ENST00000476625 GPR32P1Q8NGA4 272 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 OR6S1Q8NH40 331 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 OR6X1Q8NH79 312 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 RAB1CQ92928 201 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 SLC35B4Q969S0 331 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 MCHR2Q969V1 340 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 ZNF566Q969W8 418 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 MARS2Q96GW9 593 aaKnown RBP10.1□□□□□ -0.79
HDAC6-219ENST00000476625 EPYCQ99645 322 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 MCHR1Q99705 422 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 OR2J1Q9GZK6 312 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 RMND5AQ9H871 391 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 TMEM27Q9HBJ8 222 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 SLCO1C1Q9NYB5 712 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 ZIM2Q9NZV7 527 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 PDP1Q9P0J1 537 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-219ENST00000476625 PURGQ9UJV8 347 aaKnown RBP10.1□□□□□ -0.79
HDAC6-219ENST00000476625 NUP50Q9UKX7 468 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 TRIM33Q9UPN9 1127 aa10.1□□□□□ -0.79
HDAC6-219ENST00000476625 ZNF205O95201 554 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 OR6A2O95222 327 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 SNAP29O95721 258 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 ZNF32P17041 273 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 FUT1P19526 365 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 PCGF2P35227 344 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 ERFP50548 548 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 ERVK-25P63136 954 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 TEKQ02763 1124 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 FADDQ13158 208 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 SCARB2Q14108 478 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 SELPLGQ14242 412 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 ENTPD8Q5MY95 495 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 REEP3Q6NUK4 255 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 LINC00114Q6XXX2 140 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 RETREG3Q86VR2 466 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 FUNDC1Q8IVP5 155 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 GOLGA6L1Q8N7Z2 621 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 OR6T1Q8NGN1 323 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 NABP1Q96AH0 204 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 ELMOD3Q96FG2 381 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 TIMD4Q96H15 378 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 SLC25A44Q96H78 314 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-219ENST00000476625 ARHGDIGQ99819 225 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms