RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 NR2C1P13056 603 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 CNR1P21554 472 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 MDKP21741 143 aaPredicted RBP3.89□□□□□ -1.79
VPS50-212ENST00000476413 SLC26A3P40879 764 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 SLC25A11Q02978 314 aaKnown RBP3.89□□□□□ -1.79
VPS50-212ENST00000476413 MPPED2Q15777 294 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 C22orf42Q6IC83 251 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 REEP3Q6NUK4 255 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 ZNF530Q6P9A1 599 aaPredicted RBP3.89□□□□□ -1.79
VPS50-212ENST00000476413 LYPD2Q6UXB3 125 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 SLC16A14Q7RTX9 510 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 ZNF429Q86V71 674 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 IQCKQ8N0W5 287 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 STPG2Q8N412 459 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 Q8N9W7 124 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 OR4A4PQ8NGN8 299 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 SLC7A13Q8TCU3 470 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 TSEN15Q8WW01 171 aaKnown RBP3.89□□□□□ -1.79
VPS50-212ENST00000476413 GEMIN6Q8WXD5 167 aaKnown RBP3.89□□□□□ -1.79
VPS50-212ENST00000476413 PIK3IP1Q96FE7 263 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 TSNARE1Q96NA8 513 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 BPIFA3Q9BQP9 254 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 ASB8Q9H765 288 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 RPF2Q9H7B2 306 aaKnown RBP3.89□□□□□ -1.79
VPS50-212ENST00000476413 ZNF331Q9NQX6 463 aaPredicted RBP3.89□□□□□ -1.79
VPS50-212ENST00000476413 ZNF226Q9NYT6 803 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 DEC1Q9P2X7 70 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 ZNFX1Q9P2E3 1918 aaKnown RBP3.89□□□□□ -1.79
VPS50-212ENST00000476413 TRBV9A0A0B4J1U6 114 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 TRAV39A0A0B4J263 110 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 PLAC8L1A1L4L8 177 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 FAM166BA8MTA8 275 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 HIDE1A8MVS5 230 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 DNAJB6O75190 326 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 PCCAP05165 728 aaPredicted RBP3.88□□□□□ -1.79
VPS50-212ENST00000476413 ASGR1P07306 291 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 SMIM10L1P0DMW3 83 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 ANXA8P13928 327 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 DCKP27707 260 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 FOXN2P32314 431 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 HRH1P35367 487 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 NMUP48645 174 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 RGS8P57771 180 aaPredicted RBP3.88□□□□□ -1.79
VPS50-212ENST00000476413 ANXA8L1Q5VT79 327 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 CAMK2N1Q7Z7J9 78 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 OR5B3Q8NH48 314 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 DNAJC19Q96DA6 116 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 ASB9Q96DX5 294 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 SMIM10Q96HG1 83 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 WFIKKN1Q96NZ8 548 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 ECSITQ9BQ95 431 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 C11orf70Q9BRQ4 267 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 PTTG3PQ9NZH4 202 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 NUFIP1Q9UHK0 495 aaKnown RBP3.88□□□□□ -1.79
VPS50-212ENST00000476413 PHLPP2Q6ZVD8 1323 aa3.88□□□□□ -1.79
VPS50-212ENST00000476413 A0A0B4J2A0 478 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 GLYATL1P3A0A0U1RQE8 302 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 ZNF816-ZNF321PA0A0X1KG74 233 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 NKX2-6A6NCS4 301 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 SMCO2A6NFE2 343 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 TRIM49D1C9J1S8 452 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 SIRPB1O00241 398 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 AIM2O14862 343 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 SS18L1O75177 396 aaPredicted RBP3.87□□□□□ -1.79
VPS50-212ENST00000476413 BGLAPP02818 100 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 SERPINA5P05154 406 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 OR8G3PP0DMU2 310 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 ZNF250P15622 560 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 RRM2P31350 389 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 DRD3P35462 400 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 ZNF133P52736 654 aaPredicted RBP3.87□□□□□ -1.79
VPS50-212ENST00000476413 NUTF2P61970 127 aaKnown RBP3.87□□□□□ -1.79
VPS50-212ENST00000476413 LIPEQ05469 1076 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 MERTKQ12866 999 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 ECH1Q13011 328 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 ILKQ13418 452 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 PON3Q15166 354 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 ZBED5Q49AG3 693 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 COA6Q5JTJ3 125 aaKnown RBP3.87□□□□□ -1.79
VPS50-212ENST00000476413 PPM1LQ5SGD2 360 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 CLEC2AQ6UVW9 174 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 IGFL2Q6UWQ7 119 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 PEX26Q7Z412 305 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 LUZP2Q86TE4 346 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 RNF175Q8N4F7 328 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 PQLC3Q8N755 202 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 PRELID2Q8N945 189 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 OR51G1Q8NGK1 321 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 ZNF502Q8TBZ5 544 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 ACTRT1Q8TDG2 376 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 NAP1L5Q96NT1 182 aaPredicted RBP3.87□□□□□ -1.79
VPS50-212ENST00000476413 P2RX4Q99571 388 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 MRPL37Q9BZE1 423 aaKnown RBP3.87□□□□□ -1.79
VPS50-212ENST00000476413 CDC42EP4Q9H3Q1 356 aaKnown RBP3.87□□□□□ -1.79
VPS50-212ENST00000476413 TMEM165Q9HC07 324 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 PCYOX1Q9UHG3 505 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 SHPKQ9UHJ6 478 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 NFASCO94856 1347 aa3.87□□□□□ -1.79
VPS50-212ENST00000476413 LRP4O75096 1905 aa3.86□□□□□ -1.79
VPS50-212ENST00000476413 H0YHG0 523 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms