RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 MEX3BQ6ZN04 569 aaKnown RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 CPEB2Q7Z5Q1 589 aaKnown RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF546Q86UE3 836 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF584Q8IVC4 421 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 C20orf196Q8IYI0 205 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 CDRT4Q8N9R6 151 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 INO80EQ8NBZ0 244 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 KTI12Q96EK9 354 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF75AQ96N20 296 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 SNX18Q96RF0 628 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 PSD2Q9BQI7 771 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF700Q9H0M5 742 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 SLA2Q9H6Q3 261 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 NT5DC2Q9H857 520 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 FOLH1BQ9HBA9 442 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 MEPEQ9NQ76 525 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 ASIC5Q9NY37 505 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 HEBP2Q9Y5Z4 205 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 FANCMQ8IYD8 2048 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 TRDV1A0A1B0GX56 115 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 GPR171O14626 319 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 OIP5O43482 229 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 LAMTOR5O43504 91 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 CRTAPO75718 401 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 AKR7A3O95154 331 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 AHSA1O95433 338 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 S1PR1P21453 382 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 PRSS3P35030 304 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 GPR85P60893 370 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 SNRPGP62308 76 aaKnown RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 ASAH1Q13510 395 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 MFSD13AQ14CX5 517 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 SLC36A2Q495M3 483 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 TMEM255AQ5JRV8 349 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 ARSKQ6UWY0 536 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 PLXDC2Q6UX71 529 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 SEZ6L2Q6UXD5 910 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 NLRC3Q7RTR2 1065 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 MS4A15Q8N5U1 240 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 BHLHE23Q8NDY6 225 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 OR51A2Q8NGJ7 313 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 C16orf52Q8NHV5 167 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 HCAR2Q8TDS4 363 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 CCDC107Q8WV48 283 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 DNAJA4Q8WW22 397 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 DCUN1D4Q92564 292 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 SLAMF9Q96A28 289 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 SLC22A18Q96BI1 424 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 LINC00052Q96N35 136 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 RBM24Q9BX46 236 aaKnown RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 METTL7AQ9H8H3 244 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 TAS2R4Q9NYW5 299 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 COA3Q9Y2R0 106 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 ASB4Q9Y574 426 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 PCDHGB1Q9Y5G3 927 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 MYO9AB2RTY4 2548 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 PTPRDP23468 1912 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 TMEM269A0A1B0GVZ9 245 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 A0A1W2PPV9 198 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 OR14I1A6ND48 311 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 ZIC2O95409 532 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 EPPINO95925 133 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 CBX7O95931 251 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 SERPINA3P01011 423 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 SEMG1P04279 462 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 SERPINA5P05154 406 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 NME2P22392 152 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 CD34P28906 385 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 DLSTP36957 453 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 KIR2DL1P43626 348 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 CXCL12P48061 93 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 AP3S2P59780 193 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 RPS15AP62244 130 aaKnown RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 RPS16P62249 146 aaKnown RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 SPEM2Q0P670 501 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 INPP5JQ15735 1006 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 RNASE10Q5GAN6 216 aaKnown RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 ARHGAP11AQ6P4F7 1023 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 LANCL3Q6ZV70 420 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 NUP54Q7Z3B4 507 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 BPIFB2Q8N4F0 458 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 TMEM105Q8N8V8 129 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 MORN4Q8NDC4 146 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 OR51Q1Q8NH59 317 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 THAP6Q8TBB0 222 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 BRIX1Q8TDN6 353 aaKnown RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 DIO2Q92813 273 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 MRPL48Q96GC5 212 aaKnown RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 OR5B2Q96R09 309 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 KLHDC3Q9BQ90 382 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 RANBP3Q9H6Z4 567 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 ACSS1Q9NUB1 689 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-204ENST00000476379 PLCXD1Q9NUJ7 323 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 COPZ2Q9P299 210 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 GPR34Q9UPC5 381 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 B9D1Q9UPM9 204 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 URGCP-MRPS24S4R325 110 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 F5H5P2 479 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 F8W036 122 aa4.54□□□□□ -1.68
CCDC39-204ENST00000476379 ADAM11O75078 769 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms