RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 ZMYND11Q15326 602 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 SGCAQ16586 387 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 KDELC1Q6UW63 502 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 LYPD2Q6UXB3 125 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 KDM7AQ6ZMT4 941 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 SLC25A48Q6ZT89 311 aaKnown RBP2.15□□□□□ -2.07
LTN1-204ENST00000475344 EGFL6Q8IUX8 553 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 ZADH2Q8N4Q0 377 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 ZNF557Q8N988 423 aaPredicted RBP2.15□□□□□ -2.07
LTN1-204ENST00000475344 OR13C2Q8NGS9 318 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 CD300LFQ8TDQ1 290 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 ZNF606Q8WXB4 792 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 NT5C3BQ969T7 300 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 OR8B4Q96RC9 309 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 FOXC2Q99958 501 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 PLA2G12AQ9BZM1 189 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 LINC00597Q9H2U6 94 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 ADAP2Q9NPF8 381 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 ETNK2Q9NVF9 386 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 HYPKQ9NX55 129 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 PACSIN2Q9UNF0 486 aaPredicted RBP2.15□□□□□ -2.07
LTN1-204ENST00000475344 SYNJ2BP-COX16A0A087WUM0 186 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 TRAV39A0A0B4J263 110 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 A0A0B4J2A0 478 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 CCL21O00585 134 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 ERLIN2O94905 339 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 NDUFB10O96000 172 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 BGLAPP02818 100 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 MCF2P10911 925 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 ATP1B2P14415 290 aaPredicted RBP2.14□□□□□ -2.07
LTN1-204ENST00000475344 SLC2A5P22732 501 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 RDXP35241 583 aaKnown RBP2.14□□□□□ -2.07
LTN1-204ENST00000475344 SUB1P53999 127 aaKnown RBP eCLIP2.14□□□□□ -2.07
LTN1-204ENST00000475344 KRTAP12-4P60329 112 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 FZD2Q14332 565 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 CEP55Q53EZ4 464 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 PHYHD1Q5SRE7 291 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 TRIM40Q6P9F5 258 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 PDXPQ96GD0 296 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 AURKBQ96GD4 344 aaPredicted RBP2.14□□□□□ -2.07
LTN1-204ENST00000475344 PLEKHA8Q96JA3 519 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 HSFY1Q96LI6 401 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 TCEANC2Q96MN5 208 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 OR2A5Q96R48 311 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 OSBPL10Q9BXB5 764 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 SHPKQ9UHJ6 478 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 RFNGQ9Y644 331 aa2.14□□□□□ -2.07
LTN1-204ENST00000475344 IGLV3-22A0A075B6J6 115 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 IGKV3D-11A0A0A0MRZ8 115 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 A0A1W2PPV9 198 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 H0Y8G0 127 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 SRP72O76094 671 aaKnown RBP2.13□□□□□ -2.07
LTN1-204ENST00000475344 TMEM50AO95807 157 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 SLC2A3P11169 496 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 ETS2P15036 469 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 PSMC3P17980 439 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 IFNA8P32881 189 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 RORAP35398 523 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 SULT1E1P49888 294 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 CCR8P51685 355 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 FGF8P55075 233 aaPredicted RBP2.13□□□□□ -2.07
LTN1-204ENST00000475344 ATP5IP56385 69 aaPredicted RBP2.13□□□□□ -2.07
LTN1-204ENST00000475344 SSX2Q16385 188 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 ZBED5Q49AG3 693 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 NBPF5PQ86XG9 351 aaPredicted RBP2.13□□□□□ -2.07
LTN1-204ENST00000475344 PSTKQ8IV42 348 aaKnown RBP2.13□□□□□ -2.07
LTN1-204ENST00000475344 NECAB1Q8N987 351 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 OR4F6Q8NGB9 312 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 PIBF1Q8WXW3 757 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 RBMXL1Q96E39 390 aaKnown RBP2.13□□□□□ -2.07
LTN1-204ENST00000475344 MS4A4EQ96PG1 132 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 PANX2Q96RD6 677 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 ROPN1BQ9BZX4 212 aaPredicted RBP2.13□□□□□ -2.07
LTN1-204ENST00000475344 PKIBQ9C010 78 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 WFDC1Q9HC57 220 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 SUN2Q9UH99 717 aa2.13□□□□□ -2.07
LTN1-204ENST00000475344 CIB4A0PJX0 185 aa2.12□□□□□ -2.07
LTN1-204ENST00000475344 INS-IGF2F8WCM5 200 aa2.12□□□□□ -2.07
LTN1-204ENST00000475344 RRP8O43159 456 aaKnown RBP2.12□□□□□ -2.07
LTN1-204ENST00000475344 CBR3O75828 277 aa2.12□□□□□ -2.07
LTN1-204ENST00000475344 MPZL1O95297 269 aa2.12□□□□□ -2.07
LTN1-204ENST00000475344 C1orf105O95561 183 aa2.12□□□□□ -2.07
LTN1-204ENST00000475344 GAPDHP04406 335 aaKnown RBP2.12□□□□□ -2.07
LTN1-204ENST00000475344 UBTFL1P0CB47 393 aaPredicted RBP2.12□□□□□ -2.07
LTN1-204ENST00000475344 KITLGP21583 273 aa2.12□□□□□ -2.07
LTN1-204ENST00000475344 RAP1AP62834 184 aa2.12□□□□□ -2.07
LTN1-204ENST00000475344 BST2Q10589 180 aaKnown RBP2.12□□□□□ -2.07
LTN1-204ENST00000475344 PPIL2Q13356 520 aa2.12□□□□□ -2.07
LTN1-204ENST00000475344 AQP6Q13520 282 aa2.12□□□□□ -2.07
LTN1-204ENST00000475344 DDX39BQ13838 428 aaKnown RBP2.12□□□□□ -2.07
LTN1-204ENST00000475344 GK3PQ14409 553 aa2.12□□□□□ -2.07
LTN1-204ENST00000475344 CNIH2Q6PI25 160 aa2.12□□□□□ -2.07
LTN1-204ENST00000475344 FAM92BQ6ZTR7 304 aa2.12□□□□□ -2.07
LTN1-204ENST00000475344 LINC00304Q8N9R0 145 aa2.12□□□□□ -2.07
LTN1-204ENST00000475344 OR8J1Q8NGP2 316 aa2.12□□□□□ -2.07
LTN1-204ENST00000475344 OR2G2Q8NGZ5 317 aa2.12□□□□□ -2.07
LTN1-204ENST00000475344 SDR42E1Q8WUS8 393 aa2.12□□□□□ -2.07
LTN1-204ENST00000475344 TSSK3Q96PN8 268 aa2.12□□□□□ -2.07
LTN1-204ENST00000475344 FMO2Q99518 471 aa2.12□□□□□ -2.07
LTN1-204ENST00000475344 GCOM2Q9BZD3 368 aaPredicted RBP2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms