RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 CDK5Q00535 292 aa16.63■□□□□ 0.25
CTDSP1-207ENST00000473420 PGGHGQ32M88 737 aa16.63■□□□□ 0.25
CTDSP1-207ENST00000473420 HIKESHIQ53FT3 197 aa16.63■□□□□ 0.25
CTDSP1-207ENST00000473420 KLHL24Q6TFL4 600 aa16.63■□□□□ 0.25
CTDSP1-207ENST00000473420 ZNF813Q6ZN06 617 aa16.63■□□□□ 0.25
CTDSP1-207ENST00000473420 WDR31Q8NA23 367 aa16.63■□□□□ 0.25
CTDSP1-207ENST00000473420 CIB1Q99828 191 aa16.63■□□□□ 0.25
CTDSP1-207ENST00000473420 C9orf16Q9BUW7 83 aa16.63■□□□□ 0.25
CTDSP1-207ENST00000473420 SLC25A19Q9HC21 320 aa16.63■□□□□ 0.25
CTDSP1-207ENST00000473420 MOV10Q9HCE1 1003 aaKnown RBP16.63■□□□□ 0.25
CTDSP1-207ENST00000473420 NGBQ9NPG2 151 aa16.63■□□□□ 0.25
CTDSP1-207ENST00000473420 TMEM38BQ9NVV0 291 aa16.63■□□□□ 0.25
CTDSP1-207ENST00000473420 USE1Q9NZ43 259 aa16.63■□□□□ 0.25
CTDSP1-207ENST00000473420 TMEFF2Q9UIK5 374 aaPredicted RBP16.63■□□□□ 0.25
CTDSP1-207ENST00000473420 KLHL21Q9UJP4 597 aa16.63■□□□□ 0.25
CTDSP1-207ENST00000473420 SLC25A15Q9Y619 301 aa16.63■□□□□ 0.25
CTDSP1-207ENST00000473420 PKDREJQ9NTG1 2253 aa16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 IGKV1D-43A0A0B4J1Z2 117 aa16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 BAG2O95816 211 aa16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 WNT11O96014 354 aa16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 ANPEPP15144 967 aa16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 POU1F1P28069 291 aa16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 GIPRP48546 466 aa16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 CRISP1P54107 249 aa16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 UBE2NP61088 152 aaKnown RBP16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 MRPS34P82930 218 aaKnown RBP16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 DAG1Q14118 895 aa16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 RCN1Q15293 331 aa16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 LEG1Q6P5S2 330 aa16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 DNM1P34Q6PK57 102 aa16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 FOXL2NBQ6ZUU3 175 aa16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 ZNF771Q7L3S4 317 aaPredicted RBP16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 OR4K13Q8NH42 304 aa16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 C14orf79Q96F83 325 aa16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 ZC3HAV1LQ96H79 300 aaKnown RBP16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 NMNAT3Q96T66 252 aa16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 SYT4Q9H2B2 425 aa16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 UGT2A1Q9Y4X1 527 aa16.62■□□□□ 0.25
CTDSP1-207ENST00000473420 A0A096LPE4 126 aa16.61■□□□□ 0.25
CTDSP1-207ENST00000473420 A0A1W2PPZ6 126 aa16.61■□□□□ 0.25
CTDSP1-207ENST00000473420 IFNGP01579 166 aa16.61■□□□□ 0.25
CTDSP1-207ENST00000473420 ALPLP05186 524 aa16.61■□□□□ 0.25
CTDSP1-207ENST00000473420 B4GALT1P15291 398 aa16.61■□□□□ 0.25
CTDSP1-207ENST00000473420 NPR2P20594 1047 aa16.61■□□□□ 0.25
CTDSP1-207ENST00000473420 CRABP1P29762 137 aa16.61■□□□□ 0.25
CTDSP1-207ENST00000473420 ALDH3A2P51648 485 aa16.61■□□□□ 0.25
CTDSP1-207ENST00000473420 GINS1Q14691 196 aa16.61■□□□□ 0.25
CTDSP1-207ENST00000473420 SLC35F1Q5T1Q4 408 aa16.61■□□□□ 0.25
CTDSP1-207ENST00000473420 SEZ6L2Q6UXD5 910 aa16.61■□□□□ 0.25
CTDSP1-207ENST00000473420 SLC22A24Q8N4F4 322 aa16.61■□□□□ 0.25
CTDSP1-207ENST00000473420 NPEPL1Q8NDH3 523 aa16.61■□□□□ 0.25
CTDSP1-207ENST00000473420 SDR9C7Q8NEX9 313 aa16.61■□□□□ 0.25
CTDSP1-207ENST00000473420 OR52E2Q8NGJ4 325 aa16.61■□□□□ 0.25
CTDSP1-207ENST00000473420 OR52N5Q8NH56 324 aa16.61■□□□□ 0.25
CTDSP1-207ENST00000473420 MARVELD3Q96A59 401 aa16.61■□□□□ 0.25
CTDSP1-207ENST00000473420 TEX12Q9BXU0 123 aa16.61■□□□□ 0.25
CTDSP1-207ENST00000473420 DCLRE1BQ9H816 532 aa16.61■□□□□ 0.25
CTDSP1-207ENST00000473420 CMC2Q9NRP2 79 aa16.61■□□□□ 0.25
CTDSP1-207ENST00000473420 HECTD1Q9ULT8 2610 aa16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 FAM221AA4D161 298 aa16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 A6NNC1 897 aa16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 EI24O14681 340 aa16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 MITFO75030 526 aaPredicted RBP16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 KHDRBS3O75525 346 aaKnown RBP16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 SEC14L2O76054 403 aa16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 FARS2O95363 451 aaKnown RBP16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 HMGN1P05114 100 aa16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 OR8G3PP0DMU2 310 aa16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 CTLA4P16410 223 aa16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 ZNF362Q5T0B9 420 aaPredicted RBP16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 HIST2H2BCQ6DN03 193 aa16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 DPPA2Q7Z7J5 298 aa16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 WFDC8Q8IUA0 241 aa16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 IQCF1Q8N6M8 205 aa16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 NANOS1Q8WY41 292 aaKnown RBP16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 NSMAFQ92636 917 aa16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 EME1Q96AY2 570 aa16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 DDOQ99489 341 aa16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 GABARAPL3Q9BY60 117 aa16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 NUAK2Q9H093 628 aa16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 RACGAP1Q9H0H5 632 aa16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 SIAEQ9HAT2 523 aa16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 ORC6Q9Y5N6 252 aa16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 FKBP7Q9Y680 259 aa16.6■□□□□ 0.25
CTDSP1-207ENST00000473420 RIIAD1A6NNX1 92 aa16.59■□□□□ 0.25
CTDSP1-207ENST00000473420 SLC16A7O60669 478 aa16.59■□□□□ 0.25
CTDSP1-207ENST00000473420 ZNF3P17036 446 aa16.59■□□□□ 0.25
CTDSP1-207ENST00000473420 GUCA1AP43080 201 aaPredicted RBP16.59■□□□□ 0.25
CTDSP1-207ENST00000473420 RAD23AP54725 363 aa16.59■□□□□ 0.25
CTDSP1-207ENST00000473420 PTGES3Q15185 160 aaKnown RBP16.59■□□□□ 0.25
CTDSP1-207ENST00000473420 C3orf36Q3SXR2 165 aa16.59■□□□□ 0.25
CTDSP1-207ENST00000473420 BEX5Q5H9J7 111 aa16.59■□□□□ 0.25
CTDSP1-207ENST00000473420 ZNF787Q6DD87 383 aa16.59■□□□□ 0.25
CTDSP1-207ENST00000473420 ACSM5Q6NUN0 579 aa16.59■□□□□ 0.25
CTDSP1-207ENST00000473420 ZBTB46Q86UZ6 589 aa16.59■□□□□ 0.25
CTDSP1-207ENST00000473420 ZNF295-AS1Q8N0V1 137 aa16.59■□□□□ 0.25
CTDSP1-207ENST00000473420 CBR4Q8N4T8 237 aa16.59■□□□□ 0.25
CTDSP1-207ENST00000473420 FAM169BQ8N8A8 192 aa16.59■□□□□ 0.25
CTDSP1-207ENST00000473420 SLC37A3Q8NCC5 494 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms