RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 C1orf198Q9H425 327 aa12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 PCOLCE2Q9UKZ9 415 aa12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 YBX2Q9Y2T7 364 aaKnown RBP12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 C5orf42Q9H799 3197 aa12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 RENP00797 406 aa12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 AMY2AP04746 511 aa12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 APEHP13798 732 aaKnown RBP12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 EGR3Q06889 387 aa12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 WDR38Q5JTN6 314 aa12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 TMEM205Q6UW68 189 aa12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 ZNF627Q7L945 461 aa12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 BCORP1Q8N888 145 aa12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 BPIFCQ8NFQ6 507 aa12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 WDR92Q96MX6 357 aa12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 INTS14Q96SY0 518 aa12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 IL23AQ9NPF7 189 aa12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 TMEM14AQ9Y6G1 99 aa12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 C2orf74A8MZ97 194 aa12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 LUMP51884 338 aaPredicted RBP12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 SSBP1Q04837 148 aaKnown RBP12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 FGL1Q08830 312 aa12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 WBP2NLQ6ICG8 309 aa12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 YAF2Q8IY57 180 aa12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 PDCD10Q9BUL8 212 aa12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 COMMD9Q9P000 198 aa12.9□□□□□ -0.34
NHLRC3-204ENST00000473371 OR5H14A6NHG9 310 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 SLC17A2O00624 439 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 DMWDQ09019 674 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 NFATC4Q14934 902 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 TAF13Q15543 124 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 DEFB110Q30KQ9 67 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 LRRC37A5PQ49AS3 106 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 MESTQ5EB52 335 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 BEX5Q5H9J7 111 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 CLVS2Q5SYC1 327 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 OTPQ5XKR4 325 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 GLT8D1Q68CQ7 371 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 PATE1Q8WXA2 126 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 AMELYQ99218 206 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 LPAR4Q99677 370 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 ZNF471Q9BX82 626 aaPredicted RBP12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 NKX6-2Q9C056 277 aaPredicted RBP12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 TINAGL1Q9GZM7 467 aaPredicted RBP12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 MMP25Q9NPA2 562 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 HRASLS2Q9NWW9 162 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 GPN3Q9UHW5 284 aaPredicted RBP12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 ARHGEF17Q96PE2 2063 aaPredicted RBP12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 FOXS1O43638 330 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 EIF4E2O60573 245 aaKnown RBP12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 CT45A8P0DMV1 189 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 CT45A9P0DMV2 189 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 PNMTP11086 282 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 RPL18Q07020 188 aaKnown RBP12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 CT45A2Q5DJT8 189 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 MANEAQ5SRI9 462 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 PDSS1Q5T2R2 415 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 LIN54Q6MZP7 749 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 LINC00518Q8N0U6 118 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 KCNRGQ8N5I3 272 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 PLPP7Q8NBV4 271 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 TMEM185AQ8NFB2 350 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 OR1J2Q8NGS2 313 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 TSPAN32Q96QS1 320 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 MNTQ99583 582 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 SLC25A21Q9BQT8 299 aaPredicted RBP12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 SYT4Q9H2B2 425 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 SAV1Q9H4B6 383 aaPredicted RBP12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 HPF1Q9NWY4 346 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 FBXO4Q9UKT5 387 aa12.89□□□□□ -0.35
NHLRC3-204ENST00000473371 A0A0J9YY10 115 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 MPTX1A8MV57 137 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 TGFBR3LH3BV60 316 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 HCRTR1O43613 425 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 CD34P28906 385 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 CENPAP49450 140 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 ATXN7L3Q14CW9 347 aaPredicted RBP12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 MOB3CQ70IA8 216 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 ZNF440Q8IYI8 595 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 GALNT16Q8N428 558 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 TMEM229BQ8NBD8 167 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 ATOH1Q92858 354 aaPredicted RBP12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 SEH1LQ96EE3 360 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 VRK1Q99986 396 aaPredicted RBP12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 WDR13Q9H1Z4 485 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 ELOVL3Q9HB03 270 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 SLC17A5Q9NRA2 495 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 KCNG2Q9UJ96 466 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 ERVK-19Q9WJR5 959 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 NOP16Q9Y3C1 178 aaKnown RBP12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 ALPK2Q86TB3 2170 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 PRKNO60260 465 aaPredicted RBP12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 HLA-DQA2P01906 255 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 POU2F2P09086 479 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 CNR1P21554 472 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 FCARP24071 287 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 SCGB2B2Q4G0G5 96 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 ATG4DQ86TL0 474 aaPredicted RBP12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 BOLLQ8N9W6 283 aaKnown RBP12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 OR5T2Q8NGG2 359 aa12.88□□□□□ -0.35
NHLRC3-204ENST00000473371 OR5M8Q8NGP6 311 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms