RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 RAB4BP61018 213 aa9.18□□□□□ -0.94
APTX-216ENST00000472896 LSM11P83369 360 aaKnown RBP eCLIP9.18□□□□□ -0.94
APTX-216ENST00000472896 PRR5P85299 388 aa9.18□□□□□ -0.94
APTX-216ENST00000472896 NAAAQ02083 359 aa9.18□□□□□ -0.94
APTX-216ENST00000472896 ZNF85Q03923 595 aa9.18□□□□□ -0.94
APTX-216ENST00000472896 PJVKQ0ZLH3 352 aa9.18□□□□□ -0.94
APTX-216ENST00000472896 SLBPQ14493 270 aaKnown RBP eCLIP9.18□□□□□ -0.94
APTX-216ENST00000472896 ELAVL3Q14576 367 aaKnown RBP9.18□□□□□ -0.94
APTX-216ENST00000472896 TGIF1Q15583 401 aa9.18□□□□□ -0.94
APTX-216ENST00000472896 VWA2Q5GFL6 755 aa9.18□□□□□ -0.94
APTX-216ENST00000472896 PLBD1Q6P4A8 553 aa9.18□□□□□ -0.94
APTX-216ENST00000472896 CRTC1Q6UUV9 634 aa9.18□□□□□ -0.94
APTX-216ENST00000472896 NDUFAF7Q7L592 441 aa9.18□□□□□ -0.94
APTX-216ENST00000472896 COMTD1Q86VU5 262 aa9.18□□□□□ -0.94
APTX-216ENST00000472896 GTPBP8Q8N3Z3 284 aaPredicted RBP9.18□□□□□ -0.94
APTX-216ENST00000472896 C17orf47Q8NEP4 570 aa9.18□□□□□ -0.94
APTX-216ENST00000472896 OR52L1Q8NGH7 329 aa9.18□□□□□ -0.94
APTX-216ENST00000472896 RNF141Q8WVD5 230 aa9.18□□□□□ -0.94
APTX-216ENST00000472896 KISS1RQ969F8 398 aaPredicted RBP9.18□□□□□ -0.94
APTX-216ENST00000472896 CPNE4Q96A23 557 aaPredicted RBP9.18□□□□□ -0.94
APTX-216ENST00000472896 PFDN5Q99471 154 aa9.18□□□□□ -0.94
APTX-216ENST00000472896 UBQLN3Q9H347 655 aa9.18□□□□□ -0.94
APTX-216ENST00000472896 TUBA4BQ9H853 241 aa9.18□□□□□ -0.94
APTX-216ENST00000472896 TREM1Q9NP99 234 aa9.18□□□□□ -0.94
APTX-216ENST00000472896 UQCC1Q9NVA1 299 aa9.18□□□□□ -0.94
APTX-216ENST00000472896 ASH2LQ9UBL3 628 aa9.18□□□□□ -0.94
APTX-216ENST00000472896 MTFP1Q9UDX5 166 aa9.18□□□□□ -0.94
APTX-216ENST00000472896 AK6Q9Y3D8 172 aaKnown RBP9.18□□□□□ -0.94
APTX-216ENST00000472896 A0A1B0GTI1 187 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 A0A1W2PQU0 124 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 GGT3PA6NGU5 568 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 BLOC1S5-TXNDC5H3BN57 136 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 CTNSO60931 367 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 SLC2A10O95528 541 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 IGHV2-5P01817 119 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 GBAP04062 536 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 RLN1P04808 185 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 HOXC4P09017 264 aaPredicted RBP9.17□□□□□ -0.94
APTX-216ENST00000472896 ACVR1BP36896 505 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 BUD31P41223 144 aaPredicted RBP9.17□□□□□ -0.94
APTX-216ENST00000472896 RBM34P42696 430 aaKnown RBP9.17□□□□□ -0.94
APTX-216ENST00000472896 RAB5CP51148 216 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 TAS2R20P59543 309 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 RAB2AP61019 212 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 ACTA2P62736 377 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 ACTG2P63267 376 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 EEF1A1P68104 462 aaKnown RBP9.17□□□□□ -0.94
APTX-216ENST00000472896 RELQ04864 619 aaPredicted RBP9.17□□□□□ -0.94
APTX-216ENST00000472896 FABP9Q0Z7S8 132 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 TMEM115Q12893 351 aaPredicted RBP9.17□□□□□ -0.94
APTX-216ENST00000472896 CDK5R1Q15078 307 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 HMGN3Q15651 99 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 ACER2Q5QJU3 275 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 DNLZQ5SXM8 178 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 EEF1A1P5Q5VTE0 462 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 RPL22L1Q6P5R6 122 aaKnown RBP9.17□□□□□ -0.94
APTX-216ENST00000472896 ENPP7Q6UWV6 458 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 Q6ZSR6 202 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 FCRLAQ7L513 359 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.17□□□□□ -0.94
APTX-216ENST00000472896 NKAIN4Q8IVV8 208 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 DCUN1D3Q8IWE4 304 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 SYNPRQ8TBG9 265 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 TFGQ92734 400 aaPredicted RBP9.17□□□□□ -0.94
APTX-216ENST00000472896 NEIL2Q969S2 332 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 MIB2Q96AX9 1013 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 BMFQ96LC9 184 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 TBX5Q99593 518 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 CALML5Q9NZT1 146 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 PPP4R1LQ9P1A2 415 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 FBXL4Q9UKA2 621 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 ATXN7L1Q9ULK2 861 aaPredicted RBP9.17□□□□□ -0.94
APTX-216ENST00000472896 FCF1Q9Y324 198 aaKnown RBP9.17□□□□□ -0.94
APTX-216ENST00000472896 PPIL1Q9Y3C6 166 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 OR10H1Q9Y4A9 318 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 TRBV23-1A0A0A0MS06 115 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 TMEM272A0A1B0GTI8 110 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 PRAMEF27A3QJZ7 478 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 LRIT2A6NDA9 550 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 OR5H14A6NHG9 310 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 TMEM200CA6NKL6 621 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 B4GALT2O60909 372 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 ICOSLGO75144 302 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 GLSO94925 669 aaPredicted RBP9.17□□□□□ -0.94
APTX-216ENST00000472896 AKAIN1P0CW23 69 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 ZNF44P15621 663 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 PDX1P52945 283 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 OC90Q02509 493 aaPredicted RBP9.17□□□□□ -0.94
APTX-216ENST00000472896 PON3Q15166 354 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 KLHL26Q53HC5 615 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 PIP5KL1Q5T9C9 394 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 PWWP2BQ6NUJ5 590 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 TMEM71Q6P5X7 295 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 DRAM2Q6UX65 266 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 RHOUQ7L0Q8 258 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 TMEM200AQ86VY9 491 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 ANGPTL5Q86XS5 388 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 ARL6IP6Q8N6S5 226 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 DCAF4L2Q8NA75 395 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 POMGNT2Q8NAT1 580 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms