RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 METTL21CQ5VZV1 264 aa16.93■□□□□ 0.3
COL9A3-210ENST00000472880 PAQR4Q8N4S7 273 aaPredicted RBP16.93■□□□□ 0.3
COL9A3-210ENST00000472880 RBM15BQ8NDT2 890 aaKnown RBP16.93■□□□□ 0.3
COL9A3-210ENST00000472880 OR1J2Q8NGS2 313 aa16.93■□□□□ 0.3
COL9A3-210ENST00000472880 MCHR2Q969V1 340 aa16.93■□□□□ 0.3
COL9A3-210ENST00000472880 ZNF347Q96SE7 839 aa16.93■□□□□ 0.3
COL9A3-210ENST00000472880 SH3GL1Q99961 368 aa16.93■□□□□ 0.3
COL9A3-210ENST00000472880 ZNF416Q9BWM5 594 aa16.93■□□□□ 0.3
COL9A3-210ENST00000472880 TMEM120AQ9BXJ8 343 aa16.93■□□□□ 0.3
COL9A3-210ENST00000472880 FGFR1OP2Q9NVK5 253 aa16.93■□□□□ 0.3
COL9A3-210ENST00000472880 TAAR3PQ9P1P4 343 aa16.93■□□□□ 0.3
COL9A3-210ENST00000472880 BAG5Q9UL15 447 aa16.93■□□□□ 0.3
COL9A3-210ENST00000472880 PPIHO43447 177 aaKnown RBP16.92■□□□□ 0.3
COL9A3-210ENST00000472880 ATP8B1O43520 1251 aa16.92■□□□□ 0.3
COL9A3-210ENST00000472880 SNAP29O95721 258 aa16.92■□□□□ 0.3
COL9A3-210ENST00000472880 F13BP05160 661 aa16.92■□□□□ 0.3
COL9A3-210ENST00000472880 TROVE2P10155 538 aaKnown RBP eCLIP16.92■□□□□ 0.3
COL9A3-210ENST00000472880 RBM34P42696 430 aaKnown RBP16.92■□□□□ 0.3
COL9A3-210ENST00000472880 GZMMP51124 257 aa16.92■□□□□ 0.3
COL9A3-210ENST00000472880 TMEM33P57088 247 aa16.92■□□□□ 0.3
COL9A3-210ENST00000472880 RUNX1T1Q06455 604 aa16.92■□□□□ 0.3
COL9A3-210ENST00000472880 NANOGP8Q6NSW7 305 aa16.92■□□□□ 0.3
COL9A3-210ENST00000472880 CGB2Q6NT52 195 aa16.92■□□□□ 0.3
COL9A3-210ENST00000472880 TMEM154Q6P9G4 183 aa16.92■□□□□ 0.3
COL9A3-210ENST00000472880 DEF8Q6ZN54 512 aa16.92■□□□□ 0.3
COL9A3-210ENST00000472880 SYT14Q8NB59 555 aa16.92■□□□□ 0.3
COL9A3-210ENST00000472880 ICA1LQ8NDH6 482 aa16.92■□□□□ 0.3
COL9A3-210ENST00000472880 PFN4Q8NHR9 129 aa16.92■□□□□ 0.3
COL9A3-210ENST00000472880 SYNPRQ8TBG9 265 aa16.92■□□□□ 0.3
COL9A3-210ENST00000472880 ASB10Q8WXI3 467 aa16.92■□□□□ 0.3
COL9A3-210ENST00000472880 YIPF5Q969M3 257 aa16.92■□□□□ 0.3
COL9A3-210ENST00000472880 SGTBQ96EQ0 304 aa16.92■□□□□ 0.3
COL9A3-210ENST00000472880 POLR2J2Q9GZM3 115 aaKnown RBP16.92■□□□□ 0.3
COL9A3-210ENST00000472880 POLR2J3Q9H1A7 115 aaKnown RBP16.92■□□□□ 0.3
COL9A3-210ENST00000472880 LRMDAQ9H2I8 198 aa16.92■□□□□ 0.3
COL9A3-210ENST00000472880 CCDC134Q9H6E4 229 aa16.92■□□□□ 0.3
COL9A3-210ENST00000472880 NANOGQ9H9S0 305 aa16.92■□□□□ 0.3
COL9A3-210ENST00000472880 INIPQ9NRY2 104 aa16.92■□□□□ 0.3
COL9A3-210ENST00000472880 STX18Q9P2W9 335 aaKnown RBP16.92■□□□□ 0.3
COL9A3-210ENST00000472880 CENPBD1B2RD01 187 aa16.91■□□□□ 0.3
COL9A3-210ENST00000472880 FBP2O00757 339 aa16.91■□□□□ 0.3
COL9A3-210ENST00000472880 OR7A10O76100 309 aa16.91■□□□□ 0.3
COL9A3-210ENST00000472880 CLPTM1O96005 669 aa16.91■□□□□ 0.3
COL9A3-210ENST00000472880 FUT1P19526 365 aa16.91■□□□□ 0.3
COL9A3-210ENST00000472880 RAD52P43351 418 aa16.91■□□□□ 0.3
COL9A3-210ENST00000472880 MAGEB1P43366 347 aa16.91■□□□□ 0.3
COL9A3-210ENST00000472880 UGT2B15P54855 530 aa16.91■□□□□ 0.3
COL9A3-210ENST00000472880 HSF2Q03933 536 aa16.91■□□□□ 0.3
COL9A3-210ENST00000472880 HIST3H3Q16695 136 aa16.91■□□□□ 0.3
COL9A3-210ENST00000472880 RABL3Q5HYI8 236 aa16.91■□□□□ 0.3
COL9A3-210ENST00000472880 NKAIN4Q8IVV8 208 aa16.91■□□□□ 0.3
COL9A3-210ENST00000472880 LRRC18Q8N456 261 aa16.91■□□□□ 0.3
COL9A3-210ENST00000472880 ZNF519Q8TB69 540 aa16.91■□□□□ 0.3
COL9A3-210ENST00000472880 TMEM255BQ8WV15 326 aa16.91■□□□□ 0.3
COL9A3-210ENST00000472880 C11orf40Q8WZ69 217 aa16.91■□□□□ 0.3
COL9A3-210ENST00000472880 ECSITQ9BQ95 431 aa16.91■□□□□ 0.3
COL9A3-210ENST00000472880 MRPL13Q9BYD1 178 aaKnown RBP16.91■□□□□ 0.3
COL9A3-210ENST00000472880 BCL2L14Q9BZR8 327 aa16.91■□□□□ 0.3
COL9A3-210ENST00000472880 KCNN2Q9H2S1 579 aa16.91■□□□□ 0.3
COL9A3-210ENST00000472880 LPAR2Q9HBW0 351 aa16.91■□□□□ 0.3
COL9A3-210ENST00000472880 HINT3Q9NQE9 182 aaKnown RBP16.91■□□□□ 0.3
COL9A3-210ENST00000472880 SLCO1C1Q9NYB5 712 aa16.91■□□□□ 0.3
COL9A3-210ENST00000472880 IGLV3-9A0A075B6K5 115 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 C17orf100A8MU93 164 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 RP2O75695 350 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 OR5F1O95221 314 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 IFNA14P01570 189 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 MSMBP08118 114 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 ZNF250P15622 560 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 ACADSP16219 412 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 ITGA2P17301 1181 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 TNFRSF1BP20333 461 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 APLNRP35414 380 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 AQP2P41181 271 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 ERVS71-1P61550 626 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 PCGF3Q3KNV8 242 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 MMEL1Q495T6 779 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 ERICH5Q6P6B1 374 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 OR8J3Q8NGG0 315 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 TMEM239Q8WW34 195 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 TMEM186Q96B77 213 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 TSPAN32Q96QS1 320 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 SEPHS2Q99611 448 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 RACGAP1Q9H0H5 632 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 MRGBPQ9NV56 204 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 HIF1ANQ9NWT6 349 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 TREM2Q9NZC2 230 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 METRNQ9UJH8 293 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 GRIP1Q9Y3R0 1128 aa16.9■□□□□ 0.3
COL9A3-210ENST00000472880 FAM157AC9JC47 383 aa16.89■□□□□ 0.29
COL9A3-210ENST00000472880 MGRN1O60291 552 aa16.89■□□□□ 0.29
COL9A3-210ENST00000472880 SHOX2O60902 331 aaPredicted RBP16.89■□□□□ 0.29
COL9A3-210ENST00000472880 TRMUO75648 421 aaKnown RBP16.89■□□□□ 0.29
COL9A3-210ENST00000472880 IGF2P01344 180 aa16.89■□□□□ 0.29
COL9A3-210ENST00000472880 MT-ND5P03915 603 aa16.89■□□□□ 0.29
COL9A3-210ENST00000472880 GAAP10253 952 aa16.89■□□□□ 0.29
COL9A3-210ENST00000472880 UCP2P55851 309 aa16.89■□□□□ 0.29
COL9A3-210ENST00000472880 CCL8P80075 99 aa16.89■□□□□ 0.29
COL9A3-210ENST00000472880 C10orf128Q5T292 105 aa16.89■□□□□ 0.29
COL9A3-210ENST00000472880 SHQ1Q6PI26 577 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms