RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 KLHL21Q9UJP4 597 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 A0A0G2JPF8 293 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 SMIM23A6NLE4 172 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 HNRNPCL2B2RXH8 293 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 HNRNPCL3B7ZW38 293 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 MS4A18H0YCH9 400 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 MGRN1O60291 552 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 HNRNPCL1O60812 293 aaKnown RBP11.74□□□□□ -0.53
SMURF1-203ENST00000472627 HPRP00739 348 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 HNRNPCL4P0DMR1 293 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 HLA-DOBP13765 273 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 CCNOP22674 350 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 CRATP43155 626 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 MMP15P51511 669 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 MS4A18Q3C1V0 323 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 NRN1LQ496H8 165 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 TTMPQ5BVD1 217 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 ZNF620Q6ZNG0 422 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 ZER1Q7Z7L7 766 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 HIPK4Q8NE63 616 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 FAM110DQ8TAY7 271 aaPredicted RBP11.74□□□□□ -0.53
SMURF1-203ENST00000472627 ANP32BQ92688 251 aaKnown RBP11.74□□□□□ -0.53
SMURF1-203ENST00000472627 ZNF566Q969W8 418 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 SLC41A3Q96GZ6 507 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 APOPT1Q96IL0 206 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 TXNDC15Q96J42 360 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 PLEKHA8Q96JA3 519 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 SH3GL3Q99963 347 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 RHOXF2Q9BQY4 288 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 TMEM106BQ9NUM4 274 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 MRPL39Q9NYK5 338 aaKnown RBP11.74□□□□□ -0.53
SMURF1-203ENST00000472627 POMT1Q9Y6A1 747 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 ARHGAP32A7KAX9 2087 aa11.74□□□□□ -0.53
SMURF1-203ENST00000472627 C5orf63A6NC05 138 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 H3BSA7 217 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 CD55P08174 381 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 CD80P33681 288 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 MDH2P40926 338 aaKnown RBP11.73□□□□□ -0.53
SMURF1-203ENST00000472627 ZNF84P51523 738 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 BIDP55957 195 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 DSTNP60981 165 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 TNFAIP6P98066 277 aaPredicted RBP11.73□□□□□ -0.53
SMURF1-203ENST00000472627 DEFB112Q30KQ8 113 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 COX20Q5RI15 118 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 GPR157Q5UAW9 335 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 FAM91A1Q658Y4 838 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 ULK3Q6PHR2 472 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 JAZF1Q86VZ6 243 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 LRRC28Q86X40 367 aaPredicted RBP11.73□□□□□ -0.53
SMURF1-203ENST00000472627 LSMEM1Q8N8F7 131 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 NOA1Q8NC60 698 aaKnown RBP11.73□□□□□ -0.53
SMURF1-203ENST00000472627 OR4K5Q8NGD3 323 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 OR10S1Q8NGN2 331 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 TBC1D15Q8TC07 691 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 IPCEF1Q8WWN9 437 aaPredicted RBP11.73□□□□□ -0.53
SMURF1-203ENST00000472627 GEMIN6Q8WXD5 167 aaKnown RBP11.73□□□□□ -0.53
SMURF1-203ENST00000472627 DYRK2Q92630 601 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 SLC47A1Q96FL8 570 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 OR52E6Q96RD3 313 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 ZBTB18Q99592 522 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 SSBP3Q9BWW4 388 aaPredicted RBP11.73□□□□□ -0.53
SMURF1-203ENST00000472627 PRDM13Q9H4Q3 707 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 AKTIPQ9H8T0 292 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 MARCH7Q9H992 704 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 MKS1Q9NXB0 559 aa11.73□□□□□ -0.53
SMURF1-203ENST00000472627 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.73□□□□□ -0.53
SMURF1-203ENST00000472627 MDFIC2A0A1B0GVS7 189 aa11.72□□□□□ -0.53
SMURF1-203ENST00000472627 ZSCAN5BA6NJL1 495 aa11.72□□□□□ -0.53
SMURF1-203ENST00000472627 RFXANKO14593 260 aa11.72□□□□□ -0.53
SMURF1-203ENST00000472627 SURF4O15260 269 aa11.72□□□□□ -0.53
SMURF1-203ENST00000472627 DHHO43323 396 aa11.72□□□□□ -0.53
SMURF1-203ENST00000472627 CLPXO76031 633 aa11.72□□□□□ -0.53
SMURF1-203ENST00000472627 TSPAN15O95858 294 aa11.72□□□□□ -0.53
SMURF1-203ENST00000472627 CSF1P09603 554 aa11.72□□□□□ -0.53
SMURF1-203ENST00000472627 SEC61A1P61619 476 aaKnown RBP11.72□□□□□ -0.53
SMURF1-203ENST00000472627 HOXC5Q00444 222 aa11.72□□□□□ -0.53
SMURF1-203ENST00000472627 THEM4Q5T1C6 240 aa11.72□□□□□ -0.53
SMURF1-203ENST00000472627 MBNL2Q5VZF2 373 aaKnown RBP11.72□□□□□ -0.53
SMURF1-203ENST00000472627 KIRREL3Q8IZU9 778 aa11.72□□□□□ -0.53
SMURF1-203ENST00000472627 OR6X1Q8NH79 312 aa11.72□□□□□ -0.53
SMURF1-203ENST00000472627 FGFBP3Q8TAT2 258 aa11.72□□□□□ -0.53
SMURF1-203ENST00000472627 SLC38A5Q8WUX1 472 aa11.72□□□□□ -0.53
SMURF1-203ENST00000472627 SSMEM1Q8WWF3 244 aa11.72□□□□□ -0.53
SMURF1-203ENST00000472627 TMEM54Q969K7 222 aa11.72□□□□□ -0.53
SMURF1-203ENST00000472627 PPP1R36Q96LQ0 422 aa11.72□□□□□ -0.53
SMURF1-203ENST00000472627 MAGEB18Q96M61 343 aa11.72□□□□□ -0.53
SMURF1-203ENST00000472627 CHIAQ9BZP6 476 aa11.72□□□□□ -0.53
SMURF1-203ENST00000472627 CCNB1IP1Q9NPC3 277 aa11.72□□□□□ -0.53
SMURF1-203ENST00000472627 IGKV1D-42A0A075B6H8 117 aa11.71□□□□□ -0.53
SMURF1-203ENST00000472627 IGHV2-70DA0A0C4DH43 119 aa11.71□□□□□ -0.53
SMURF1-203ENST00000472627 A0A1B0GWA3 101 aa11.71□□□□□ -0.53
SMURF1-203ENST00000472627 F5H0A9 414 aaPredicted RBP11.71□□□□□ -0.53
SMURF1-203ENST00000472627 ANP32DO95626 131 aa11.71□□□□□ -0.53
SMURF1-203ENST00000472627 MT-ATP6P00846 226 aa11.71□□□□□ -0.53
SMURF1-203ENST00000472627 ADORA3P0DMS8 318 aa11.71□□□□□ -0.53
SMURF1-203ENST00000472627 RPS2P15880 293 aaKnown RBP11.71□□□□□ -0.53
SMURF1-203ENST00000472627 STOMP27105 288 aa11.71□□□□□ -0.53
SMURF1-203ENST00000472627 GDI2P50395 445 aaKnown RBP11.71□□□□□ -0.53
SMURF1-203ENST00000472627 ARHGDIAP52565 204 aa11.71□□□□□ -0.53
SMURF1-203ENST00000472627 GNB2P62879 340 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms